ENH: improve configuration of gperftools (now at version 2.5)

- support gperftools-none, gperftools-system configurations
  as per other third-party packages.

STYLE: clean up more environment variables

CONFIG: testing adios rule

etc/config.csh/unset

@@ -3,7 +3,7 @@
 # \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
 #  \\    /   O peration     |
 #   \\  /    A nd           | Copyright (C) 2011-2016 OpenFOAM Foundation
-#    \\/     M anipulation  |
+#    \\/     M anipulation  | Copyright (C) 2016 OpenCFD Ltd.
 #------------------------------------------------------------------------------
 # License
 #     This file is part of OpenFOAM.
@@ -119,7 +119,6 @@ unsetenv OPAL_PREFIX
 # Unset Ensight/ParaView-related environment variables
 
 unsetenv ENSIGHT9_READER
-unsetenv CMAKE_HOME
 unsetenv ParaView_DIR
 unsetenv ParaView_INCLUDE_DIR
 unsetenv ParaView_MAJOR
@@ -129,12 +128,15 @@ unsetenv PV_PLUGIN_PATH
 #------------------------------------------------------------------------------
 # unset other ThirdParty environment variables
 
+unsetenv ADIOS_ARCH_PATH
 unsetenv BOOST_ARCH_PATH
 unsetenv CCMIO_ARCH_PATH
 unsetenv CGAL_ARCH_PATH
 unsetenv FFTW_ARCH_PATH
+unsetenv GPERFTOOLS_ARCH_PATH
 unsetenv GMP_ARCH_PATH
 unsetenv MPFR_ARCH_PATH
+unsetenv METIS_ARCH_PATH
 unsetenv SCOTCH_ARCH_PATH
 
 #------------------------------------------------------------------------------
@@ -174,7 +176,6 @@ unalias wm32
 unalias wmSP
 unalias wmDP
 
-unalias wmRefresh
 unalias wmUnset
 
 unalias wmSchedOn
@@ -191,6 +192,7 @@ unalias util
 unalias tut
 unalias run
 
+unalias wmRefresh
 unalias foamVersion
 unalias foamPV
 

etc/config.sh/gperftools

@@ -3,7 +3,7 @@
 # \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
 #  \\    /   O peration     |
 #   \\  /    A nd           | Copyright (C) 2012-2016 OpenFOAM Foundation
-#    \\/     M anipulation  |
+#    \\/     M anipulation  | Copyright (C) 2016 OpenCFD Ltd.
 #------------------------------------------------------------------------------
 # License
 #     This file is part of OpenFOAM.
@@ -25,17 +25,54 @@
 #     etc/config.sh/gperftools
 #
 # Description
-#     Setup file for gperftools binaries libraries.
+#     Setup file for gperftools binaries and libraries.
+#     Sourced from OpenFOAM-<VERSION>/etc/bashrc
 #
+#     If using system-wide installations, use the following settings:
+#
+#         gperftools_version=gperftools-system
+#
+#     If the system gperftools is unusable (eg, too old) and you don't
+#     have or want a ThirdParty installation:
+#
+#         gperftools_version=gperftools-none
+#
+#     If using a central installation, but not located under ThirdParty:
+#         - specify gperftools-system
+#         - provide full paths for GPERFTOOLS_ARCH_PATH
+#
+# Note
+#     When _foamAddLib is unset (eg, called from makeGperftools):
+#         - gperftools_version variable are retained.
+#         - the LD_LIBRARY_PATH and PATH are not adjusted.
 #------------------------------------------------------------------------------
 
-version=svn
-gperftools_install=$WM_THIRD_PARTY_DIR/platforms/$WM_ARCH$WM_COMPILER
+gperftools_version=gperftools-2.5
 
-GPERFTOOLS_VERSION=gperftools-$version
-GPERFTOOLS_ARCH_PATH=$gperftools_install/$GPERFTOOLS_VERSION
-
-export PATH=$GPERFTOOLS_ARCH_PATH/bin:$PATH
-export LD_LIBRARY_PATH=$GPERFTOOLS_ARCH_PATH/lib:$LD_LIBRARY_PATH
+GPERFTOOLS_ARCH_PATH=$WM_THIRD_PARTY_DIR/platforms/$WM_ARCH$WM_COMPILER/$gperftools_version
+
+#------------------------------------------------------------------------------
+if [ "$FOAM_VERBOSE" -a "$PS1" ]
+then
+    echo "Using gperftools ($gperftools_version)  ->  $GPERFTOOLS_ARCH_PATH" 1>&2
+fi
+
+if type _foamAddLib > /dev/null 2>&1    # normal sourcing
+then
+
+    # If GPERFTOOLS_ARCH_PATH does not end with '-system' or '-none',
+    # it is located within ThirdParty, or a central installation
+    # outside of ThirdParty and must be added to the lib-path.
+
+    ending="${GPERFTOOLS_ARCH_PATH##*-}"
+    if [ "$ending" != none -a "$ending" != system ]
+    then
+        _foamAddLib     $GPERFTOOLS_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH
+        _foamAddPath    $GPERFTOOLS_ARCH_PATH/bin
+    fi
+
+    unset gperftools_version ending
+
+fi
 
 #------------------------------------------------------------------------------

etc/config.sh/unset

@@ -3,7 +3,7 @@
 # \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
 #  \\    /   O peration     |
 #   \\  /    A nd           | Copyright (C) 2011-2016 OpenFOAM Foundation
-#    \\/     M anipulation  |
+#    \\/     M anipulation  | Copyright (C) 2016 OpenCFD Ltd.
 #------------------------------------------------------------------------------
 # License
 #     This file is part of OpenFOAM.
@@ -115,7 +115,6 @@ fi
 # Unset Ensight/ParaView-related environment variables
 
 unset ENSIGHT9_READER
-unset CMAKE_HOME
 unset ParaView_DIR
 unset ParaView_INCLUDE_DIR
 unset ParaView_MAJOR
@@ -125,12 +124,15 @@ unset PV_PLUGIN_PATH
 #------------------------------------------------------------------------------
 # unset other ThirdParty environment variables
 
+unset ADIOS_ARCH_PATH
 unset BOOST_ARCH_PATH
 unset CCMIO_ARCH_PATH
 unset CGAL_ARCH_PATH
 unset FFTW_ARCH_PATH
+unset GPERFTOOLS_ARCH_PATH
 unset GMP_ARCH_PATH
 unset MPFR_ARCH_PATH
+unset METIS_ARCH_PATH
 unset SCOTCH_ARCH_PATH
 
 #------------------------------------------------------------------------------

wmake/rules/General/ADIOS

@@ -0,0 +1,19 @@
+#-------------------------------*- makefile -*---------------------------------
+# ADIOS includes/libraries
+
+sinclude $(GENERAL_RULES)/mplib$(WM_MPLIB)
+sinclude $(RULES)/mplib$(WM_MPLIB)
+
+ADIOS_INC = -I$(ADIOS_ARCH_PATH)/include
+
+ADIOS_LIBS := \
+    -L$(ADIOS_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) \
+    -ladios_$(FOAM_MPI)
+
+# ADIOS dependent libraries. Eg, after -L/usr/lib64 ...
+# Query as sequential to reduce mpi-dependencies
+
+ADIOS_LIBS +=
+    $(shell $(ADIOS_ARCH_PATH)/bin/adios_config -s -l | sed -e 's@^.*-L/usr/lib[^ ]*@@')
+
+#------------------------------------------------------------------------------