ENH: support sequencing of vtp/vtu files
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@ -7,6 +7,7 @@
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# \\/ M anipulation |
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#-------------------------------------------------------------------------------
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# Copyright (C) 2015 OpenFOAM Foundation
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# Copyright (C) 2020 DLR
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#------------------------------------------------------------------------------
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# License
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# This file is part of OpenFOAM.
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@ -44,8 +45,11 @@ Usage: ${0##*/} [OPTIONS] ...
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options:
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-c | -case <dir> specify case directory (default = local dir)
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-d | -dir <dir> post-processing directory <dir> (default = postProcessing)
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-h | -help help
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-o | -out <dir> output links directory <dir> (default = sequencedVTK)
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-vtk create sequence of vtk files (default)
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-vtp create sequence of vtp files
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-vtu create sequence of vtu files
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-h | -help help
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Creates symbolic links to all VTK files in a post-processing directory
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Links form a sequence like name.0000.vtk, name.0001.vtk, etc.
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@ -57,30 +61,35 @@ USAGE
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exit 1
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}
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# Set defaults
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DIR=postProcessing
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OUT=sequencedVTK
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fileType=vtk
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while [ "$#" -gt 0 ]
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do
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case "$1" in
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-h | -help*)
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usage
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;;
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-c | -case)
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[ "$#" -ge 2 ] || usage "'$1' option requires an argument"
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cd "$2" 2>/dev/null || usage "directory does not exist: '$2'"
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shift 2
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shift
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;;
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-d | -dir)
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[ "$#" -ge 2 ] || usage "'$1' option requires an argument"
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DIR=$2
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shift 2
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;;
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-h | -help*)
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usage
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shift
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;;
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-o | -out)
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[ "$#" -ge 2 ] || usage "'$1' option requires an argument"
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OUT=$2
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shift 2
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;;
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-vtk | -vtp | -vtu)
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fileType="${1#-}"
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;;
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-*)
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usage "invalid option '$1'"
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;;
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@ -88,6 +97,7 @@ do
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break
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;;
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esac
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shift
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done
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if [ ! -d $DIR ]; then
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@ -95,8 +105,8 @@ if [ ! -d $DIR ]; then
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exit 0
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fi
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FILES=$(find $DIR -name '*.vtk' -type f)
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NAMES=$(for f in $FILES; do basename $f .vtk; done | sort -u)
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FILES=$(find $DIR -name "*.$fileType" -type f)
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NAMES=$(for f in $FILES; do basename $f .$fileType; done | sort -u)
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if [ -d $OUT ]; then
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echo "$OUT directory already exists. Deleting links within it..."
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@ -108,12 +118,12 @@ fi
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for N in $NAMES
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do
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echo "Sequencing all VTK files named $N.vtk"
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echo "Sequencing all $fileType files named $N.$fileType"
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# Create list of VTK files, ordered by time step
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# Create list of VTK (vtk, vtp, vtu) files, ordered by time step
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FILE_LIST=$(echo $FILES | \
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tr " " "\n" | \
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grep $N.vtk | \
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grep $N.$fileType | \
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awk -F'/' '{print($(NF-1)" "$0)}' | \
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sort -k 1 -g | \
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cut -d' ' -f2)
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@ -122,7 +132,9 @@ do
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for F in $FILE_LIST
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do
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i=$(expr $i + 1) # Relies on ordered list of $sourceFiles
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LINK=$(printf "${N}.%04d.vtk" $i)
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LINK=$(printf "${N}.%04d.$fileType" $i)
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ln -s ../$F $OUT/$LINK
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done
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done
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# -----------------------------------------------------------------------------
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