Commit Graph

912 Commits

Author SHA1 Message Date
Mark Olesen
0e47b0717d ENH: vtk::seriesWriter to encapsulate writing file series (issue #926) 2018-10-02 14:06:34 +02:00
Mark Olesen
42009c168e ENH: vtk::vtmWriter for generating vtkMultiBlockDataSet (.vtm) (issue #926)
- Provides a means of accumulating file entries for generating vtm
  by accumulate blocks, datasets and writing them later.

  Only a single block depth is currently supported and the methods
  are kept fairly simple.
2018-10-02 12:53:01 +02:00
Mark Olesen
1456a8ca1d STYLE: emit warning about using deprecated "~OpenFOAM" expansion
- Within strings it is preferable to use the "<etc>" instead.
  Most use cases for the old "~OpenFOAM" expansion have been obsoleted
  by the #includeEtc directive.
2018-11-23 13:12:33 +01:00
Mark Olesen
ac03307258 ENH: improve consistency in version handling (issue #1010)
- use std::string instead of c-string for the string constants

- centralize some definitions of resources into foamVersion.H

  Now expose some of the hard-coded values used in foamEtcFiles()
  so that they can be known or even overridden as required.

  Relocate to src/OpenFOAM/include as a constant location.
2018-11-23 11:08:36 +01:00
Mark Olesen
45d5d7bbc1 COMP: add minimal test application
- uses wmake, without OpenFOAM libraries.

  The application and libray serve as a minimal test case for wmake,
  but can also be used to generate a minimal library/executable pair
  target for testing of packaging etc.
2018-11-23 00:21:10 +01:00
Mark Olesen
083e9e9665 ENH: isolate version information in foamVersion names instead of globals
- For compatibility, access to the old global names is provided via
  macros
        #define FOAMversion     foamVersion::version
        #define FOAMbuild       foamVersion::build
        #define FOAMbuildArch   foamVersion::buildArch

- this isolation makes it easier to provide additional scoped methods
  for dealing with version related information.  Eg, printBuildInfo()
2018-11-22 11:50:24 +01:00
Mark Olesen
5a9a2935ad ENH: modernize code in dimensionSet, dimensionSets
- 'unfriend' operators on dimensionSet, since they operate without
  requiring access to non-public members.

- add missing invTransform() function for dimensionSet.

- make inv(const dimensionSet&) available as
  operator~(const dimensionSet&), which can be used instead
  of (dimless/ds).
2018-11-20 18:16:17 +01:00
Mark Olesen
72c4b3186b ENH: added dimensionedType::writeEntry method
- writing of dictionary entry with the name of the dimensionedType
  suppressed if it is identical to the keyword.
  This corresponds to the input requirements.
2018-11-20 16:26:44 +01:00
Mark Olesen
dd87c98393 ENH: add read guard for dimensionedType constructors (#762)
- deprecate dimensionedType constructors using an Istream in favour of
  versions accepting a keyword and a dictionary.

  Dictionary entries are almost the exclusive means of read
  constructing a dimensionedType. By construct from the dictionary
  entry instead of doing a lookup() first, we can detect possible
  input errors such as too many tokens as a result of a input syntax
  error.

  Constructing a dimensionedType from a dictionary entry now has
  two forms.

  1.  dimensionedType(key, dims, dict);

      This is the constructor that will normally be used.

      It accepts entries with optional leading names and/or
      dimensions. If the entry contains dimensions, they are
      verified against the expected dimensions and an IOError is
      raised if they do not correspond. On conclusion, checks the
      token stream for any trailing rubbish.

  2.  dimensionedType(key, dict);

      This constructor is used less frequently.

      Similar to the previous description, except that it is initially
      dimensionless. If entry contains dimensions, they are used
      without further verification. The constructor also includes a
      token stream check.

      This constructor is useful when the dimensions are entirely
      defined from the dictionary input, but also when handling
      transition code where the input dimensions are not obvious from
      the source.

      This constructor can also be handy when obtaining values from
      a dictionary without needing to worry about the input dimensions.
      For example,

         Info<< "rho: " << dimensionedScalar("rho", dict).value() << nl;

      This will accept a large range of inputs without hassle.

ENH: consistent handling of dimensionedType for inputs (#1083)

BUG: incorrect Omega dimensions (fixes #2084)
2018-11-20 15:14:10 +01:00
Mark Olesen
4bf4b89af4 ENH: support scalar predicates and lists of scalar predicates (#1056) 2018-11-13 14:12:53 +01:00
Mark Olesen
1883a872a1 STYLE: adds comments in empty Make/options files
- easier when making modifications

STYLE: spelling in topoSetSource comments
2018-11-13 15:21:13 +01:00
Mark Olesen
8752120ad5 COMP: use hard-coded values for fieldTypes (issue #1068)
- this seems to be the only reliable means of obtaining the values.

  Using typeName_() yields the wrong value.

  Using the typeName causes initialization issues
  (segfault when executing on some systems).
2018-11-12 16:39:55 +01:00
Mark Olesen
90dd4b30cd TUT: syntax typo (#1059) 2018-11-12 13:59:38 +01:00
Mark Olesen
9bc61e5f41 ENH: improve IOobjectList name filtering
- support name filtering by class based on <Type> or predicates.
  Eg,

      objects.sortedNames<volScalarField>(namePattern);
  vs  objects.sortedNames(volScalarField::typeName, namePattern);

  These can also be used directly for untyped name matching.
  Eg,
      objects.sortedNames<void>(namePattern);

  Can also use a predicate:

      objects.sortedNames(wordRe("vol.*Field"), namePattern);
      objects.sortedNames
      (
          [](const word& clsName){ return clsName.startsWith("vol"); },
          namePattern
      );
2018-11-12 08:55:45 +01:00
Mark Olesen
f94d724a93 ENH: add objectRegistry::count() methods
- can be useful for obtaining information about number of fields.
  Eg,

       nScalar = mesh.count<volScalarField>(wordre);
2018-11-11 19:00:54 +01:00
Mark Olesen
4965ea4988 ENH: simplify/extend objectRegistry code with templated predicates
- replace explicit use of wordRe, wordRes, wordHashSet as filters
  with a MatchPredicate.

- support filtering by class based on <Type> or predicates
2018-11-10 17:20:32 +01:00
Mark Olesen
faaa93fdb5 ENH: add IOobjectList::findObject() method
- naming similar to objectRegistry, with unambiguous resolution.
  The lookup() methods have different return types depending on the
  calling parameter.

STYLE: use IOobjectListTemplates.C for implementations

- previously included as local definition within IOobjectList.C,
  but will be adding more templated methods soon.

- adjust parameters (eg, matchName instead of matcher) to show their
  function

ENH: handle objectRegistry::names<void>(...)

- this is equivalent to no Type restriction, and can be used when
  filtering names. Eg,

     obr.names<void>(wordRe..);
2018-11-09 21:57:55 +01:00
Mark Olesen
91cfe4c271 ENH: add wordRes::matching() method
- returns indices of matching entries.
2018-11-09 21:21:15 +01:00
Mark Olesen
6f3471d5fb STYLE: protect and comment test of illegal access (#1066) 2018-11-08 14:46:35 +01:00
Mattijs Janssens
c20b12b62f Feature patch function1 2018-10-29 09:44:31 +00:00
Mark Olesen
07dafe7b0b STYLE: use range-for when looping dictionary entries.
- as part of the cleanup of dictionary access methods (c6520033c9)
  made the dictionary class single inheritance from IDLList<entry>.

  This eliminates any ambiguities for iterators and allows
  for simple use of range-for looping.

  Eg,
      for (const entry& e : topDict))
      {
          Info<< "entry:" << e.keyword() << " is dict:" << e.isDict() << nl;
      }

   vs

      forAllConstIter(dictionary, topDict, iter))
      {
          Info<< "entry:" << iter().keyword()
              << " is dict:" << iter().isDict() << nl;
      }
2018-10-19 13:08:24 +02:00
Mark Olesen
3b74512231 ENH: cleanup of Enum class
- more dictionary-like methods, enforce keyType::LITERAL for all
  lookups to avoid any spurious keyword matching.

- new readEntry, readIfPresent methods

- The get() method replaces the now deprecate lookup() method.

- Deprecate lookupOrFailsafe()
  Failsafe behaviour is now an optional parameter for lookupOrDefault,
  which makes it easier to tailor behaviour at runtime.

- output of the names is now always flatted without line-breaks.
  Thus,

     os << flatOutput(someEnumNames.names()) << nl;
     os << someEnumNames << nl;

  both generate the same output.

- Constructor now uses C-string (const char*) directly instead of
  Foam::word in its initializer_list.

- Remove special enum + initializer_list constructor form since
  it can create unbounded lookup indices.

- Removd old hasEnum, hasName forms that were provided during initial
  transition from NamedEnum.

- Added static_assert on Enum contents to restrict to enum or
  integral values.  Should not likely be using this class to enumerate
  other things since it internally uses an 'int' for its values.

  Changed volumeType accordingly to enumerate on its type (enum),
  not the class itself.
2018-10-18 12:57:32 +02:00
Mark Olesen
e0255cfff2 ENH: add compareOp for three-way comparison
- similar to the \c <=> operator in C++20.
  Primarily for use when defining cascaded sort function objects.
2018-10-17 09:29:28 +02:00
Mark Olesen
8b569b16d1 STYLE: logical ops return bool (issue #1043)
- these currently only with bool parameters, but the return value should
  nonetheless always be a bool value:

      andOp(), orOp(), lessOp(), lessEqOp(), greaterOp(), greaterEqOp()

- renamed the unused eqEqOp() to equalOp() for naming consistency with
  the equal() global function.

ENH: equalOp() specialization for scalars

- function object version of the equal() function.
  The default constructor uses the same tolerance (VSMALL),
  but can also supply an alternative tolerance on construction.
2018-10-17 07:59:26 +02:00
Mark Olesen
0a0fee88a0 STYLE: update fileName docs and minor code cleanup 2018-10-16 23:03:38 +02:00
Mark Olesen
77017e58f4 ENH: support token stream checking to entry (issue #762)
- Eg,
    scalar val(-GREAT);

    const entry* eptr = dict.findEntry(k);

    if (eptr)
    {
        val = eptr.get<scalar>();

        // Or
        eptr.readEntry(val);
    }
2018-10-16 11:13:35 +02:00
Mark Olesen
7864672c78 ENH: make cwd() behaviour user-adjustable (issue #1007)
- with the 'cwd' optimization switch it is possible to select the
  preferred behaviour for the cwd() function.

  A value of 0 causes cwd() to return the physical directory,
  which is what getcwd() and `pwd -P` return.
  Until now, this was always the standard behaviour.

  With a value of 1, cwd() instead returns the logical directory,
  which what $PWD contains and `pwd -L` returns.
  If any of the sanity checks fail (eg, PWD points to something other
  than ".", etc), a warning is emitted and the physical cwd() is
  returned instead.

  Apart from the optical difference in the output, this additional
  control helps workaround file systems with whitespace or other
  characters in the directory that normally cause OpenFOAM to balk.
  Using a cleaner symlink elsewhere should skirt this issue.

  Eg,
      cd $HOME
      ln -s "/mounted volume/user/workdir"  workdir
      cd workdir
      # start working with OpenFOAM
2018-10-16 01:30:44 +02:00
Mark Olesen
c6520033c9 ENH: rationalize dictionary access methods
- use keyType::option enum to consolidate searching options.
  These enumeration names should be more intuitive to use
  and improve code readability.

    Eg,   lookupEntry(key, keyType::REGEX);
    vs    lookupEntry(key, false, true);

  or

    Eg,   lookupEntry(key, keyType::LITERAL_RECURSIVE);
    vs    lookupEntry(key, true, false);

- new findEntry(), findDict(), findScoped() methods with consolidated
  search options for shorter naming and access names more closely
  aligned with other components. Behave simliarly to the
  methods lookupEntryPtr(), subDictPtr(), lookupScopedEntryPtr(),
  respectively. Default search parameters consistent with lookupEntry().

    Eg, const entry* e = dict.findEntry(key);
    vs  const entry* e = dict.lookupEntryPtr(key, false, true);

- added '*' and '->' dereference operators to dictionary searchers.
2018-10-15 16:16:12 +02:00
Mark Olesen
8eddcc072a ENH: avoid readScalar, readLabel etc from dictionary (#762, #1033)
- use the dictionary 'get' methods instead of readScalar for
  additional checking

     Unchecked:  readScalar(dict.lookup("key"));
     Checked:    dict.get<scalar>("key");

- In templated classes that also inherit from a dictionary, an additional
  'template' keyword will be required. Eg,

     this->coeffsDict().template get<scalar>("key");

  For this common use case, the predefined getXXX shortcuts may be
  useful. Eg,

     this->coeffsDict().getScalar("key");
2018-10-12 08:14:47 +02:00
Mattijs Janssens
fdf19d67a4 Merge branch 'feature-coordinateSystem' into 'develop'
coordinate system improvements

See merge request Development/OpenFOAM-plus!211
2018-10-11 16:32:03 +01:00
Mark Olesen
a77ab5d4eb STYLE: relocate distributed flag into ParRunControl
- adjust member order in TimePaths to better packing
2018-10-11 09:12:01 +02:00
Mark Olesen
f7c85b034b STYLE: clearer handling of argList -case internals (issue #1037) 2018-10-11 08:32:43 +02:00
Mark Olesen
2cd2732fed ENH: avoid change when setting UPtrList twice (issue #1035)
UPtrList::set(const label i, T* ptr);

No-op if the new pointer value is identical to the current content.
This avoid memory management issues.
2018-10-09 08:27:50 +02:00
Mark Olesen
3b77493abc ENH: wordRes matcher method that distinguishes literal vs. regex
- useful for customizing the behaviour of white/black lists depending
  on the type of the match.
2018-10-07 18:30:33 +02:00
Mark Olesen
501326b27a ENH: additional constructor and methods for regionProperties
- can now construct with READ_IF_PRESENT and use count() to determine
  if it was loaded. names() and sortedNames() for a collected overview.
2018-10-01 16:01:02 +02:00
Mark Olesen
8548009eee ENH: generalize instant to be templated, movable, etc
- allows reuse for other purposes
2018-10-03 14:05:45 +02:00
Mark Olesen
6c91048e8b ENH: fileName hasPath(), removePath() methods
- improved move constructors/assignments for fileName, string, etc
2018-10-03 14:05:45 +02:00
Mark Olesen
6697bb4735 ENH: improve, simplify, rationalize coordinate system handling (issue #863)
Previously the coordinate system functionality was split between
coordinateSystem and coordinateRotation. The coordinateRotation stored
the rotation tensor and handled all tensor transformations.

The functionality has now been revised and consolidated into the
coordinateSystem classes. The sole purpose of coordinateRotation
is now just to provide a selectable mechanism of how to define the
rotation tensor (eg, axis-angle, euler angles, local axes) for user
input, but after providing the appropriate rotation tensor it has
no further influence on the transformations.

--

The coordinateSystem class now contains an origin and a base rotation
tensor directly and various transformation methods.

  - The origin represents the "shift" for a local coordinate system.

  - The base rotation tensor represents the "tilt" or orientation
    of the local coordinate system in general (eg, for mapping
    positions), but may require position-dependent tensors when
    transforming vectors and tensors.

For some coordinate systems (currently the cylindrical coordinate system),
the rotation tensor required for rotating a vector or tensor is
position-dependent.

The new coordinateSystem and its derivates (cartesian, cylindrical,
indirect) now provide a uniform() method to define if the rotation
tensor is position dependent/independent.

The coordinateSystem transform and invTransform methods are now
available in two-parameter forms for obtaining position-dependent
rotation tensors. Eg,

      ... = cs.transform(globalPt, someVector);

In some cases it can be useful to use query uniform() to avoid
storage of redundant values.

      if (cs.uniform())
      {
          vector xx = cs.transform(someVector);
      }
      else
      {
          List<vector> xx = cs.transform(manyPoints, someVector);
      }

Support transform/invTransform for common data types:
   (scalar, vector, sphericalTensor, symmTensor, tensor).

====================
  Breaking Changes
====================

- These changes to coordinate systems and rotations may represent
  a breaking change for existing user coding.

- Relocating the rotation tensor into coordinateSystem itself means
  that the coordinate system 'R()' method now returns the rotation
  directly instead of the coordinateRotation. The method name 'R()'
  was chosen for consistency with other low-level entities (eg,
  quaternion).

  The following changes will be needed in coding:

      Old:  tensor rot = cs.R().R();
      New:  tensor rot = cs.R();

      Old:  cs.R().transform(...);
      New:  cs.transform(...);

  Accessing the runTime selectable coordinateRotation
  has moved to the rotation() method:

      Old:  Info<< "Rotation input: " << cs.R() << nl;
      New:  Info<< "Rotation input: " << cs.rotation() << nl;

- Naming consistency changes may also cause code to break.

      Old:  transformVector()
      New:  transformPrincipal()

  The old method name transformTensor() now simply becomes transform().

====================
  New methods
====================

For operations requiring caching of the coordinate rotations, the
'R()' method can be used with multiple input points:

       tensorField rots(cs.R(somePoints));

   and later

       Foam::transformList(rots, someVectors);

The rotation() method can also be used to change the rotation tensor
via a new coordinateRotation definition (issue #879).

The new methods transformPoint/invTransformPoint provide
transformations with an origin offset using Cartesian for both local
and global points. These can be used to determine the local position
based on the origin/rotation without interpreting it as a r-theta-z
value, for example.

================
  Input format
================

- Streamline dictionary input requirements

  * The default type is cartesian.
  * The default rotation type is the commonly used axes rotation
    specification (with e1/e2/3), which is assumed if the 'rotation'
    sub-dictionary does not exist.

    Example,

    Compact specification:

        coordinateSystem
        {
            origin  (0 0 0);
            e2      (0 1 0);
            e3      (0.5 0 0.866025);
        }

    Full specification (also accepts the longer 'coordinateRotation'
    sub-dictionary name):

        coordinateSystem
        {
            type    cartesian;
            origin  (0 0 0);

            rotation
            {
                type    axes;
                e2      (0 1 0);
                e3      (0.5 0 0.866025);
            }
        }

   This simplifies the input for many cases.

- Additional rotation specification 'none' (an identity rotation):

      coordinateSystem
      {
          origin  (0 0 0);
          rotation { type none; }
      }

- Additional rotation specification 'axisAngle', which is similar
  to the -rotate-angle option for transforming points (issue #660).
  For some cases this can be more intuitive.

  For example,

      rotation
      {
          type    axisAngle;
          axis    (0 1 0);
          angle   30;
      }
  vs.
      rotation
      {
          type    axes;
          e2      (0 1 0);
          e3      (0.5 0 0.866025);
      }

- shorter names (or older longer names) for the coordinate rotation
  specification.

     euler         EulerRotation
     starcd        STARCDRotation
     axes          axesRotation

================
  Coding Style
================
- use Foam::coordSystem namespace for categories of coordinate systems
  (cartesian, cylindrical, indirect). This reduces potential name
  clashes and makes a clearer declaration. Eg,

      coordSystem::cartesian csys_;

  The older names (eg, cartesianCS, etc) remain available via typedefs.

- added coordinateRotations namespace for better organization and
  reduce potential name clashes.
2018-10-01 13:54:10 +02:00
Mark Olesen
7d88075842 ENH: dictionary lookup with detection of zero tokens (#1033)
- the opposite problem from issue #762. Now we also test if the input
  token stream had any tokens at all.

- called by the dictionary get<> and readEntry() methods.
2018-10-05 09:56:17 +02:00
Mark Olesen
4a61042f3f ENH: add column access and other methods for Tensor
- Can now retrieve or set a column/row of a tensor.
  Either compile-time or run-time checks.

  Get
     t.col<1>();   t.col(1);
     t.row<1>();   t.row(1);

  Set
     t.col<1>(vec);   t.col(1,vec);
     t.row<1>(vec);   t.row(1,vec);

  The templated versions are compile-time checked

     t.col<3>();
     t.col<3>(vec);

  The parameter versions are run-time checked

     t.col(3);
     t.col(3,vec);

ENH: provide named access to tensor/tensor inner product as inner()
2018-09-28 11:20:31 +02:00
Mark Olesen
64c3e484bb STYLE: add nBoundaryFaces() method to primitiveMesh
- nBoundaryFaces() is often used and is identical to
  (nFaces() - nInternalFaces()).

- forward the mesh nInternalFaces() and nBoundaryFaces() to
  polyBoundaryMesh as nFaces() and start() respectively,
  for use when operating on a polyBoundaryMesh.

STYLE:

- use identity() function with starting offset when creating boundary maps.

     labelList map
     (
         identity(mesh.nBoundaryFaces(), mesh.nInternalFaces())
     );

  vs.

     labelList map(mesh.nBoundaryFaces());
     forAll(map, i)
     {
         map[i] = mesh.nInternalFaces() + i;
     }
2018-09-27 10:17:30 +02:00
Mark Olesen
12c903bba8 ENH: define nameOp<>, typeOp<>, sizeOp<> functors (issue #1013) 2018-09-19 15:32:04 +02:00
Andrew Heather
d3812b9b69 Merge remote-tracking branch 'origin/master' into develop 2018-08-29 13:51:40 +01:00
Will Bainbridge
5e7a766159 BUG: cubicEqn, quadraticEqn: Correction to repeated roots
Also extended the cubic equation test routine and modified the error
methods so that they more accurately generate the round of error of
evaluation.

This resolves bug report https://bugs.openfoam.org/view.php?id=3015
2018-07-24 15:54:32 +01:00
Andrew Heather
6e35bcda70 ENH: Updated config for release v1806 2018-06-28 12:56:00 +01:00
Mark Olesen
be07fc9bbe STYLE: some test apps compiling into wrong location (issue #876) 2018-06-27 10:31:35 +02:00
Mark Olesen
30b4eda7a4 TUT: update some old keywords found in tutorials
- functionObjectLibs -> libs
- redirectType -> name
- change deprecated writeCompression flags types to Switch.

- cleanup some trailing ';;' from some dictionaries
2018-06-26 14:18:52 +02:00
Mark Olesen
62b83a76a4 ENH: face, triFace sign() method analogous to plane
- a quick test for which side of the face a point is located
2018-08-14 10:08:22 +02:00
Mark Olesen
b41d5ed523 STYLE: remove deprecated constraints format from tutorials 2018-07-11 17:02:40 +02:00
Mark Olesen
ae36f5f504 ENH: change argList get<> and getList<> from read<>, readList<>
- more consistent with dictionary method naming. The get<> or
  getList<> returns a value, doesn't read into a existing location.
2018-08-09 11:27:36 +02:00