Commit Graph

66 Commits

Author SHA1 Message Date
OpenFOAM bot
154029ddd0 BOT: Cleaned up header files 2019-02-06 12:28:23 +00:00
Mark Olesen
14a404170b ENH: for-range, forAllIters() ... in applications/utilities
- reduced clutter when iterating over containers
2019-01-07 09:20:51 +01:00
Mark Olesen
1d85fecf4d ENH: use Zero when zero-initializing types
- makes the intent clearer and avoids the need for additional
  constructor casting. Eg,

      labelList(10, Zero)    vs.  labelList(10, 0)
      scalarField(10, Zero)  vs.  scalarField(10, scalar(0))
      vectorField(10, Zero)  vs.  vectorField(10, vector::zero)
2018-12-11 23:50:15 +01:00
Mark Olesen
29a5793b5b STYLE: argList::opt method instead of the longer argList::lookupOrDefault
- also replaced a few instances of readIfPresent with opt<> for
  constant values.
2018-12-12 12:10:39 +01:00
Mark Olesen
68ec561df8 STYLE: add usage notes to more utilities and solvers 2018-12-11 15:25:27 +01:00
Mark Olesen
41a03f3790 ENH: add regular expressions for reconstructPar, mapFieldsPar -fields option
- improved flexibility

- reconstruction of Lagrangian positions/fields now handled as a class
  for better modularity
2018-11-28 08:36:17 +01:00
Mark Olesen
4e04c1966f ENH: use dictionary::get<word>() instead of lookup() in a few places 2018-10-19 09:11:31 +02:00
Mark Olesen
a77ab5d4eb STYLE: relocate distributed flag into ParRunControl
- adjust member order in TimePaths to better packing
2018-10-11 09:12:01 +02:00
Mark Olesen
501326b27a ENH: additional constructor and methods for regionProperties
- can now construct with READ_IF_PRESENT and use count() to determine
  if it was loaded. names() and sortedNames() for a collected overview.
2018-10-01 16:01:02 +02:00
Mark Olesen
69f6f63810 ENH: add globalPath() to argList and TimePaths
- simply combines (rootPath()/globalCaseName())
2018-09-28 15:24:59 +02:00
Mark Olesen
64c3e484bb STYLE: add nBoundaryFaces() method to primitiveMesh
- nBoundaryFaces() is often used and is identical to
  (nFaces() - nInternalFaces()).

- forward the mesh nInternalFaces() and nBoundaryFaces() to
  polyBoundaryMesh as nFaces() and start() respectively,
  for use when operating on a polyBoundaryMesh.

STYLE:

- use identity() function with starting offset when creating boundary maps.

     labelList map
     (
         identity(mesh.nBoundaryFaces(), mesh.nInternalFaces())
     );

  vs.

     labelList map(mesh.nBoundaryFaces());
     forAll(map, i)
     {
         map[i] = mesh.nInternalFaces() + i;
     }
2018-09-27 10:17:30 +02:00
mattijs
4637e4582c ENH: redistributePar: allow nDomains 1 in decomposeParDict. Fixes #924.
Note: this removes the option to reconstruct by setting nDomains to 1.
      You now have to explicitly use -reconstruct to reconstruct.
2018-08-09 15:17:21 +01:00
Mark Olesen
e0f83938ee ENH: ignore -noFunctionObjects option when disabled
- With argList::noFunctionObjects() we use the logic added in
  4b93333292 (issue #352)

  By removing the '-noFunctionObjects' option, we automatically
  suppress the creation of function-objects via Time (with argList
  as a parameter).
  There is generally no need in these cases for an additional

      runTime.functionObjects().off()  statement

  Use the argList::noFunctionObjects() for more direct configuration
  and reduce unnecessary clutter in the -help information.

  In previous versions, the -noFunctionObjects would have been redundant
  anyhow, so we can also just ignore it now instead.
2018-08-08 09:44:28 +02:00
Mark Olesen
cb919a6c41 ENH: tag some options as 'advanced' (only shown with -help-full)
General:
    * -roots, -hostRoots, -fileHandler

Specific:
    * -to <coordinateSystem> -from <coordinateSystem>

- Display -help-compat when compatibility or ignored options are available

STYLE: capitalization of options text
2018-07-31 11:54:15 +02:00
Mark Olesen
ff26b96a80 STYLE: use 'cloudObjects' instead of 'sprayObjects' 2018-07-30 13:15:38 +02:00
Mark Olesen
02ad76df4f ENH: allow wordHashSet filter for IOobjectList::names
- simplifies usage.
  Support syncPar check on names() to detect inconsistencies.

- simplify readFields, ReadFields and other routines by using these
  new methods.
2018-07-26 14:56:52 +02:00
Mark Olesen
dbe0db1d9a ENH: fvMeshSubset improvements (issue #951)
- what was previously termed 'setLargeCellSubset()' is now simply
  'setCellSubset()' and supports memory efficient interfaces.

  The new parameter ordering avoids ambiguities caused by default
  parameters.

  Old parameter order:

      setLargeCellSubset
      (
          const labelList& region,
          const label currentRegion,
          const label patchID = -1,
          const bool syncCouples = true
      );

  New parameter order:

      setCellSubset
      (
          const label regioni,
          const labelUList& regions,
          const label patchID = -1,
          const bool syncCouples = true
      );

   And without ambiguity:

      setCellSubset
      (
          const labelUList& selectedCells,
          const label patchID = -1,
          const bool syncCouples = true
      );

- support bitSet directly for specifying the selectedCells for
  memory efficiency and ease of use.

- Additional constructors to perform setCellSubset() immediately,
  which simplifies coding.

  For example,

      meshParts.set
      (
          zonei,
          new fvMeshSubset(mesh, selectedCells)
      );

  Or even

      return autoPtr<fvMeshSubset>::New(mesh, selectedCells);
2018-07-25 18:58:00 +02:00
Mark Olesen
0304911921 STYLE: more consistent use of dimensioned Zero, scalar decimal points
- use scalar(0) instead of scalar(0.0) etc
2018-07-13 10:28:48 +02:00
Mark Olesen
2662042d49 ENH: improve controls for Time (issue #910)
- relocate some standard functionality to TimePaths to allow a lighter
  means of managing time directories without using the entire Time
  mechanism.

- optional enableLibs for Time construction (default is on)
  and a corresponding argList::noLibs() and "-no-libs" option

STYLE:

- mark Time::outputTime() as deprecated MAY-2016

- use pre-increment for runTime, although there is no difference in
  behaviour or performance.
2018-07-02 10:20:01 +02:00
mattijs
d703f09d11 BUG: fileOperation: avoid par syn in uncollated. Fixes #846. 2018-05-29 12:13:13 +01:00
Mark Olesen
3d608bf06a ENH: remove reliance on the Xfer class (issue #639)
This class is largely a pre-C++11 holdover. It is now possible to
simply use move construct/assignment directly.

In a few rare cases (eg, polyMesh::resetPrimitives) it has been
replaced by an autoPtr.
2018-03-05 13:28:53 +01:00
Mark Olesen
660f3e5492 ENH: cleanup autoPtr class (issue #639)
Improve alignment of its behaviour with std::unique_ptr

  - element_type typedef
  - release() method - identical to ptr() method
  - get() method to get the pointer without checking and without releasing it.
  - operator*() for dereferencing

Method name changes

  - renamed rawPtr() to get()
  - renamed rawRef() to ref(), removed unused const version.

Removed methods/operators

  - assignment from a raw pointer was deleted (was rarely used).
    Can be convenient, but uncontrolled and potentially unsafe.
    Do allow assignment from a literal nullptr though, since this
    can never leak (and also corresponds to the unique_ptr API).

Additional methods

  - clone() method: forwards to the clone() method of the underlying
    data object with argument forwarding.

  - reset(autoPtr&&) as an alternative to operator=(autoPtr&&)

STYLE: avoid implicit conversion from autoPtr to object type in many places

- existing implementation has the following:

     operator const T&() const { return operator*(); }

  which means that the following code works:

       autoPtr<mapPolyMesh> map = ...;
       updateMesh(*map);    // OK: explicit dereferencing
       updateMesh(map());   // OK: explicit dereferencing
       updateMesh(map);     // OK: implicit dereferencing

  for clarity it may preferable to avoid the implicit dereferencing

- prefer operator* to operator() when deferenced a return value
  so it is clearer that a pointer is involve and not a function call
  etc    Eg,   return *meshPtr_;  vs.  return meshPtr_();
2018-02-26 12:00:00 +01:00
Mark Olesen
15f7260884 ENH: cleanup of ListOps, ListListOps. Adjustments to List, PackedList.
- relocated ListAppendEqOp and ListUniqueEqOp to ListOps::appendEqOp
  and ListOps::UniqueEqOp, respectively for better code isolation and
  documentation of purpose.

- relocated setValues to ListOps::setValue() with many more
  alternative selectors possible

- relocated createWithValues to ListOps::createWithValue
  for better code isolation. The default initialization value is itself
  now a default parameter, which allow for less typing.

  Negative indices in the locations to set are now silently ignored,
  which makes it possible to use an oldToNew mapping that includes
  negative indices.

- additional ListOps::createWithValue taking a single position to set,
  available both in copy assign and move assign versions.
  Since a negative index is ignored, it is possible to combine with
  the output of List::find() etc.

STYLE: changes for PackedList

- code simplication in the PackedList iterators, including dropping
  the unused operator() on iterators, which is not available in plain
  list versions either.

- improved sizing for PackedBoolList creation from a labelUList.

ENH: additional List constructors, for handling single element list.

- can assist in reducing constructor ambiguity, but can also helps
  memory optimization when creating a single element list.
  For example,

    labelListList labels(one(), identity(mesh.nFaces()));
2018-03-01 14:12:51 +01:00
Mark Olesen
87b1bbacd8 ENH: support writeLagrangianPositions in redistributePar (issue #702) 2018-02-20 15:22:47 +01:00
Mark Olesen
345a2a42f1 ENH: simplify method names for reading argList options and arguments
- use succincter method names that more closely resemble dictionary
  and HashTable method names. This improves method name consistency
  between classes and also requires less typing effort:

    args.found(optName)        vs.  args.optionFound(optName)
    args.readIfPresent(..)     vs.  args.optionReadIfPresent(..)
    ...
    args.opt<scalar>(optName)  vs.  args.optionRead<scalar>(optName)
    args.read<scalar>(index)   vs.  args.argRead<scalar>(index)

- the older method names forms have been retained for code compatibility,
  but are now deprecated
2018-01-08 15:35:18 +01:00
Mark Olesen
e60a77442c STYLE: less verbose output of available procs in redistributePar 2017-12-22 12:50:55 +01:00
Mark Olesen
cf15d299cc ENH: remove old proc-addressing when redistributing (issue #656)
- after redistribution, the old cellProcAddressing etc files are incorrect
  and potentially troublesome.
2017-12-08 12:02:09 +00:00
Mark Olesen
7d7b0bfe84 STYLE: use list methods find/found instead of findIndex function 2017-10-24 19:07:34 +02:00
mattijs
dfe464dd5b BUG: redistributePar: transfer particles correctly. Fixes #605. 2017-09-28 12:36:25 +01:00
Mark Olesen
8399277d7d STYLE: eliminate duplicate includes (issue #293) 2017-07-17 14:44:05 +02:00
Mark Olesen
c50368ecc6 ENH: add trapFpe and setNaN optimisationSwitch (issue #517)
- allows configuration without an environment variable.
  For compatibility still respect FOAM_SIGFPE and FOAM_SETNAN
  env-variables

- The env-variables are now treated as true/false switch values.
  Previously there was just a check for env exists or not, but this
  can be fairly fragile for a user's environment.
2017-07-05 17:49:37 +02:00
Andrew Heather
45381b1085 MRG: Integrated Foundation code to commit 19e602b 2017-03-28 11:30:10 +01:00
Henry Weller
96ad725a0b Updated UPstream::commsTypes to use the C++11 enum class 2017-03-10 19:54:55 +00:00
mattijs
23a6cadfa6 BUG: redistributePar: remove inconsistent *ProcAddressing. Fixes #351. 2016-12-19 12:58:49 +00:00
Mark Olesen
2c7eff8d6b Merge remote-tracking branch 'origin/feature-cellSetRemove' into develop 2016-12-07 14:13:00 +00:00
mattijs
db3699f8ab ENH: redistributePar: remove shm data 2016-12-06 09:10:30 +00:00
mattijs
d9740aa33e ENH: redistributePar: remove pointFields 2016-11-21 17:20:34 +00:00
Mark Olesen
8b4dfe24f1 Merge remote-tracking branch 'origin/decomposeParDict' into develop 2016-11-19 15:34:36 +01:00
mattijs
ae3d2f4d57 ENH: topoSet: clear sets upon writing modified mesh. Fixes #129. 2016-11-16 14:58:46 +00:00
Mark Olesen
52d0289ee1 BUG: resolve some decomposeParDict problems (issues #60, #265).
- Cleanup/centralize handling of -decomposeParDict by relocating
  common code into argList. Ensures that all processes receive
  identical information about the -decomposeParDict opton.

- Only use alternative decomposeParDict for simpleFoam/motorBike
  tutorial so that this will be included in the test loop for snappy.

- Added Mattijs' fix for surfaceRedistributePar.
2016-10-25 18:19:19 +02:00
Andrew Heather
b9940cbbb1 COMP: Multiple changes - first clean build after latest merge - UNTESTED 2016-09-23 15:36:53 +01:00
mattijs
8bdc7e01bf Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-06-29 10:43:51 +01:00
mattijs
49e4475b46 STYLE: redistributePar: indentation 2016-06-29 10:43:36 +01:00
Henry Weller
ce0cd35185 Patches contributed by Mattijs Janssens:
splitMeshRegions: handle flipping of faces for surface fields

subsetMesh: subset dimensionedFields

decomposePar: use run-time selection of decomposition constraints. Used to
    keep cells on particular processors. See the decomposeParDict in

$FOAM_UTILITIES/parallel/decomposePar:
  - preserveBaffles: keep baffle faces on same processor
  - preserveFaceZones: keep faceZones owner and neighbour on same processor
  - preservePatches: keep owner and neighbour on same processor. Note: not
    suitable for cyclicAMI since these are not coupled on the patch level
  - singleProcessorFaceSets: keep complete faceSet on a single processor
  - refinementHistory: keep cells originating from a single cell on the
    same processor.

decomposePar: clean up decomposition of refinement data from snappyHexMesh

reconstructPar: reconstruct refinement data (refineHexMesh, snappyHexMesh)

reconstructParMesh: reconstruct refinement data (refineHexMesh, snappyHexMesh)

redistributePar:
  - corrected mapping surfaceFields
  - adding processor patches in order consistent with decomposePar

argList: check that slaves are running same version as master

fvMeshSubset: move to dynamicMesh library

fvMeshDistribute:
  - support for mapping dimensionedFields
  - corrected mapping of surfaceFields

parallel routines: allow parallel running on single processor

Field: support for
  - distributed mapping
  - mapping with flipping

mapDistribute: support for flipping

AMIInterpolation: avoid constructing localPoints
2016-05-15 16:36:48 +01:00
Andrew Heather
b9313ef2fe ENH: Consistency updates after Foundation merge and code tidying 2016-04-25 16:46:56 +01:00
Henry Weller
450728ea84 Standardized cell, patch, face and processor loop index names 2016-04-25 12:00:53 +01:00
andy
fd9d801e2d GIT: Initial commit after latest foundation merge 2016-04-25 11:40:48 +01:00
Henry Weller
43beb06018 Standardized cell, patch and face loop index names 2016-04-25 10:28:32 +01:00
Henry Weller
2d5ff31649 boundaryField() -> boundaryFieldRef() 2016-04-24 22:07:37 +01:00
Andrew Heather
efb39a8790 ENH: (further) Doxygen documentation updates for module support 2016-06-27 20:34:19 +01:00