Commit Graph

984 Commits

Author SHA1 Message Date
mattijs
26f6f4257a STYLE: createBafflesDict: typo in comment 2018-10-31 13:55:06 +00:00
Mark Olesen
6697bb4735 ENH: improve, simplify, rationalize coordinate system handling (issue #863)
Previously the coordinate system functionality was split between
coordinateSystem and coordinateRotation. The coordinateRotation stored
the rotation tensor and handled all tensor transformations.

The functionality has now been revised and consolidated into the
coordinateSystem classes. The sole purpose of coordinateRotation
is now just to provide a selectable mechanism of how to define the
rotation tensor (eg, axis-angle, euler angles, local axes) for user
input, but after providing the appropriate rotation tensor it has
no further influence on the transformations.

--

The coordinateSystem class now contains an origin and a base rotation
tensor directly and various transformation methods.

  - The origin represents the "shift" for a local coordinate system.

  - The base rotation tensor represents the "tilt" or orientation
    of the local coordinate system in general (eg, for mapping
    positions), but may require position-dependent tensors when
    transforming vectors and tensors.

For some coordinate systems (currently the cylindrical coordinate system),
the rotation tensor required for rotating a vector or tensor is
position-dependent.

The new coordinateSystem and its derivates (cartesian, cylindrical,
indirect) now provide a uniform() method to define if the rotation
tensor is position dependent/independent.

The coordinateSystem transform and invTransform methods are now
available in two-parameter forms for obtaining position-dependent
rotation tensors. Eg,

      ... = cs.transform(globalPt, someVector);

In some cases it can be useful to use query uniform() to avoid
storage of redundant values.

      if (cs.uniform())
      {
          vector xx = cs.transform(someVector);
      }
      else
      {
          List<vector> xx = cs.transform(manyPoints, someVector);
      }

Support transform/invTransform for common data types:
   (scalar, vector, sphericalTensor, symmTensor, tensor).

====================
  Breaking Changes
====================

- These changes to coordinate systems and rotations may represent
  a breaking change for existing user coding.

- Relocating the rotation tensor into coordinateSystem itself means
  that the coordinate system 'R()' method now returns the rotation
  directly instead of the coordinateRotation. The method name 'R()'
  was chosen for consistency with other low-level entities (eg,
  quaternion).

  The following changes will be needed in coding:

      Old:  tensor rot = cs.R().R();
      New:  tensor rot = cs.R();

      Old:  cs.R().transform(...);
      New:  cs.transform(...);

  Accessing the runTime selectable coordinateRotation
  has moved to the rotation() method:

      Old:  Info<< "Rotation input: " << cs.R() << nl;
      New:  Info<< "Rotation input: " << cs.rotation() << nl;

- Naming consistency changes may also cause code to break.

      Old:  transformVector()
      New:  transformPrincipal()

  The old method name transformTensor() now simply becomes transform().

====================
  New methods
====================

For operations requiring caching of the coordinate rotations, the
'R()' method can be used with multiple input points:

       tensorField rots(cs.R(somePoints));

   and later

       Foam::transformList(rots, someVectors);

The rotation() method can also be used to change the rotation tensor
via a new coordinateRotation definition (issue #879).

The new methods transformPoint/invTransformPoint provide
transformations with an origin offset using Cartesian for both local
and global points. These can be used to determine the local position
based on the origin/rotation without interpreting it as a r-theta-z
value, for example.

================
  Input format
================

- Streamline dictionary input requirements

  * The default type is cartesian.
  * The default rotation type is the commonly used axes rotation
    specification (with e1/e2/3), which is assumed if the 'rotation'
    sub-dictionary does not exist.

    Example,

    Compact specification:

        coordinateSystem
        {
            origin  (0 0 0);
            e2      (0 1 0);
            e3      (0.5 0 0.866025);
        }

    Full specification (also accepts the longer 'coordinateRotation'
    sub-dictionary name):

        coordinateSystem
        {
            type    cartesian;
            origin  (0 0 0);

            rotation
            {
                type    axes;
                e2      (0 1 0);
                e3      (0.5 0 0.866025);
            }
        }

   This simplifies the input for many cases.

- Additional rotation specification 'none' (an identity rotation):

      coordinateSystem
      {
          origin  (0 0 0);
          rotation { type none; }
      }

- Additional rotation specification 'axisAngle', which is similar
  to the -rotate-angle option for transforming points (issue #660).
  For some cases this can be more intuitive.

  For example,

      rotation
      {
          type    axisAngle;
          axis    (0 1 0);
          angle   30;
      }
  vs.
      rotation
      {
          type    axes;
          e2      (0 1 0);
          e3      (0.5 0 0.866025);
      }

- shorter names (or older longer names) for the coordinate rotation
  specification.

     euler         EulerRotation
     starcd        STARCDRotation
     axes          axesRotation

================
  Coding Style
================
- use Foam::coordSystem namespace for categories of coordinate systems
  (cartesian, cylindrical, indirect). This reduces potential name
  clashes and makes a clearer declaration. Eg,

      coordSystem::cartesian csys_;

  The older names (eg, cartesianCS, etc) remain available via typedefs.

- added coordinateRotations namespace for better organization and
  reduce potential name clashes.
2018-10-01 13:54:10 +02:00
sergio
77753021df Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2018-10-04 09:14:08 -07:00
sergio
789d261f0e Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2018-10-01 17:14:39 -07:00
sergio
d0c39b0e27 ENH: Changing non-interpolation field in versetFvPatchField
for correct run time reading.
Setting up twoSimpleRotors tutorial for smooth pressure
fluctuations
2018-10-01 17:11:39 -07:00
mattijs
b937a531bd STYLE: Allrun: use suffix option 2018-10-03 09:39:27 +01:00
Mark Olesen
d92d77cc84 Merge remote-tracking branch 'origin/master' into develop 2018-09-28 13:20:41 +02:00
Mark Olesen
a6e735e5ce TUT: samplingDebug was left enabled in tutorial (and missing a file) 2018-07-18 19:41:32 +02:00
Andrew Heather
6e35bcda70 ENH: Updated config for release v1806 2018-06-28 12:56:00 +01:00
Andrew Heather
16a6379183 TUT: Cleaned up headers 2018-06-26 17:37:38 +01:00
Mark Olesen
2df51655ca TUT: remove stray catalyst script 2018-06-27 08:22:13 +02:00
Mark Olesen
b70b2d8629 TUT: fixup formatting, tabs etc 2018-06-26 16:37:35 +02:00
Mark Olesen
30b4eda7a4 TUT: update some old keywords found in tutorials
- functionObjectLibs -> libs
- redirectType -> name
- change deprecated writeCompression flags types to Switch.

- cleanup some trailing ';;' from some dictionaries
2018-06-26 14:18:52 +02:00
Andrew Heather
1e5919f8b0 TUT: Updates - see #856 2018-06-26 11:16:24 +01:00
Mark Olesen
d9568a4b56 SUBMODULE: updates for catalyst
- SIGFPE handling, cmake configuration

CONFIG: adjust for simplified Catalyst channel naming

- no sub-channels, select volField output based in the
  (internal | boundary) dictionary switches instead
2018-06-24 15:50:50 +02:00
Mark Olesen
eed1e99378 TUT: remove 'functions' dictionary scope from catalyst files
- rename Allrun.parallel to Allrun-parallel (issue #899)
2018-06-23 13:41:20 +02:00
Mark Olesen
e0db37f043 ENH: support rhoRef for derived surfMesh sampled fields (issue #898) 2018-06-22 16:57:30 +02:00
Mark Olesen
4d03e4386d STYLE: update version info in some tutorial files 2018-08-14 11:58:52 +02:00
Mark Olesen
45f4a8b9c5 ENH: bounding box clipping for ensightWrite function object (issue #973)
- for larger problems with a smaller region of interest, can apply a
  bounding to limit the size of the ensight geometry and fields created.

  Since the implementation uses a fvMeshSubset, there is an additional
  per-process memory overhead.

  A high output frequency should be avoided with moving meshes, since
  this indirectly forces a frequent update of the submesh.
2018-08-14 11:50:53 +02:00
mattijs
da74e872f4 STYLE: overset: remove unused dictionary entry 2018-08-09 17:39:22 +01:00
sergio
0be3caec4a ENH: Improving twoRotorTutorial set up 2018-08-09 15:09:56 -07:00
Mark Olesen
de2eed3e7d ENH: additional methods and improvements to plane
- signedDistance() method is like distance() but retains
  the positive/negative sign for the side of the plane.

- the sign() method returns the sign as -1,0,+1 integer for
  classification purposes where it is important to distinguish between
  a zero value and a positive value (eg, for cutting). Optional
  tolerance can be supplied to round for zero.

- refactor and inlined simple and frequently used methods.

- add boundBox faceCentre() method, which can be useful for creating
  clipping planes from a bounding box.
  Relocated treeBoundBox faceNormals to boundBox since they apply
  equally there - the meaning of the faces (x-min, x-max, etc)
  is the same, even if the point addressing for the faces differs.
2018-08-03 23:17:49 +02:00
Mark Olesen
329f3a99e4 TUT: remove extraneous '}' from dictionary input 2018-07-26 17:06:10 +02:00
Mark Olesen
d58c142404 ENH: use restricted dictionary lookup for utilities (issue #762)
- get<label>, get<scalar> instead of readLabel, readScalar, etc.
2018-07-24 08:08:30 +02:00
Mark Olesen
ec318a95d1 Merge remote-tracking branch 'origin/master' into develop 2018-07-23 21:18:43 +02:00
Andrew Heather
598c49fe8a TUT: Added new tutorial cases 2018-06-22 15:25:06 +01:00
Andrew Heather
abb597359f ENH: Updated the boundaryDataSurfaceWriter to use a plain list for the points file 2018-06-22 15:24:07 +01:00
Mark Olesen
f7d4f52726 STYLE: update names of known solvers, consistent End value (issue #856) 2018-06-21 16:03:06 +02:00
Mark Olesen
237f20b0ed TUT: tab removal 2018-06-21 15:43:15 +02:00
Mark Olesen
73fbed1c2c TUT: consistent use of scale and headers for blockMeshDict 2018-06-21 15:28:25 +02:00
Mark Olesen
dcde2eed74 TUT: consistent name for runTimePostProcessing dictionary 2018-06-21 11:56:00 +02:00
Andrew Heather
f9dc9dbf5f TUT: updates 2018-06-21 08:31:22 +01:00
sergio
7bf7aaea91 ENH: Further enhancements to stabilizationSchemes 2018-06-19 12:04:27 -07:00
sergio
9001aa2440 Merge branch 'develop-pre-release' of develop.openfoam.com:Development/OpenFOAM-plus into develop-pre-release 2018-06-19 11:23:36 -07:00
sergio
a3a6768608 ENH: Adding additional entry to stabilizationSchemes.
Correcting tutorial and expanding documentation
2018-06-19 11:21:56 -07:00
Mark Olesen
1871b1d3bc TUT: use separate forces file for wingMotion2D 2018-06-19 17:18:15 +02:00
mattijs
0c5f36f40a ENH: Move stabilisation to steady-state part of LES motorBike tutorial. See #856. 2018-06-18 15:00:47 +01:00
Mark Olesen
cad0455d46 TUT: consistent application name for lumpedPointMotion
- use simpleFoam for steady-state and change to pimpleFoam for
  transient. This provides better correspondence with the expected log
  output.
2018-07-23 09:12:06 +02:00
Mark Olesen
712f49758a TUT: update snappy dictionaries to use minMedialAxisAngle
- canonical parameter name changed from "minMedianAxisAngle" to
  "minMedialAxisAngle" (DEC-2013), but was never previously reported
  as having changed.
2018-07-18 16:47:34 +02:00
Mark Olesen
181582fef8 TUT: remove extraneous '}' from dictionary input 2018-07-11 14:24:49 +02:00
Mark Olesen
d530bc254a STYLE: code cleanup searchableSurface (issue #929)
- improve doxygen entries for searchable surfaces.

- support selection of searchable surfaces with shorter names.
  Eg,
      type   box | cylinder | ...;
  vs  type   searchableBox | searchableCylinder | ...;
2018-07-06 11:03:28 +02:00
Andrew Heather
7b8e2b1a18 Merge remote-tracking branch 'origin/master' into develop 2018-07-10 16:42:59 +01:00
Mark Olesen
ad5ab870ef Merge branch 'feature-dictionary-checks' into develop 2018-07-05 13:40:25 +02:00
Mark Olesen
f7dc92d744 STYLE: mark compatibility level for keyword redirectType (issue #912)
- was replaced with "name" in 1706
2018-07-05 09:26:26 +02:00
Mark Olesen
2662042d49 ENH: improve controls for Time (issue #910)
- relocate some standard functionality to TimePaths to allow a lighter
  means of managing time directories without using the entire Time
  mechanism.

- optional enableLibs for Time construction (default is on)
  and a corresponding argList::noLibs() and "-no-libs" option

STYLE:

- mark Time::outputTime() as deprecated MAY-2016

- use pre-increment for runTime, although there is no difference in
  behaviour or performance.
2018-07-02 10:20:01 +02:00
Mark Olesen
e3d306d3cf TUT: additional and extra closing braces in dictionaries 2018-06-18 14:05:49 +02:00
sergio
46e7dab0cb ENH: Adding stabilizationSchemes FO and tutorial 2018-06-06 12:54:34 -07:00
Andrew Heather
f700bce878 Merge remote-tracking branch 'origin/develop' into develop-pre-release 2018-05-17 12:14:27 +01:00
Mark Olesen
73a525b7f5 ENH: additional input/output parameters for lumped point motion (closes #804)
- input or output scaling of values to manage dissimilar unit systems
  in the structures model

- logging of communicated force, moments and updated positions.
  This allows tracking of the information exchange throughout the
  duration of the simulation and may assist in post-simulation diagnosis.
2018-03-22 23:57:46 +01:00
Mark Olesen
28627250c6 CONFIG: update catalyst configuration files
- relocated from
    etc/caseDicts/postProcessing/catalyst/ -> etc/caseDicts/insitu/catalyst/

- adjusted for unified catalyst function object
2018-05-11 14:55:47 +02:00
Mark Olesen
5c60cbe34d ENH: improve ensightWrite handling of moving mesh
- now treat all mesh geometries as moving, since we cannot know
  beforehand if this is the case.
2018-05-08 12:41:06 +02:00
Mark Olesen
f99880cbea ENH: add nodeValues option for ensightWrite function object (closes #734) 2018-05-08 09:51:15 +02:00
Mark Olesen
9531212f14 ENH: disable ensightWrite, vtkWrite function objects in post-process mode
- prevents accidental overwrite of runtime conversions.
2018-05-08 09:16:00 +02:00
Mark Olesen
dd8341f659 ENH: make format of ExecutionTime = ... output configurable (issue #788)
- controlled by the the 'printExecutionFormat' InfoSwitch in
  etc/controlDict

      // Style for "ExecutionTime = " output
      // - 0 = seconds (with trailing 's')
      // - 1 = day-hh:mm:ss

   ExecutionTime = 112135.2 s  ClockTime = 113017 s

   ExecutionTime = 1-07:08:55.20  ClockTime = 1-07:23:37

- Callable via the new Time::printExecutionTime() method,
  which also helps to reduce clutter in the applications.
  Eg,

     runTime.printExecutionTime(Info);

  vs

     Info<< "ExecutionTime = " << runTime.elapsedCpuTime() << " s"
         << "  ClockTime = " << runTime.elapsedClockTime() << " s"
         << nl << endl;

--

ENH: return elapsedClockTime() and clockTimeIncrement as double

- previously returned as time_t, which is less portable.
2018-04-27 15:00:34 +02:00
mattijs
af3f93c057 ENH: snappyHexMeshDict: changed 17x to 1.7.x 2018-04-18 11:32:59 +01:00
Andrew Heather
a230e8d408 STYLE: Correcting typos 2018-03-28 17:14:16 +01:00
Mark Olesen
c2da3424bb SUBMODULE: catalyst function object
- now uses current OpenFOAM code level

- added initial catalyst script for insitu processing of overset
2018-04-12 16:25:42 +02:00
Mark Olesen
a9741cea79 ENH: additional text expansion shortcuts (issue #792)
Support the following expansions when they occur at the start of a
string:

    Short-form       Equivalent
    =========       ===========
      <etc>/          ~OpenFOAM/   (as per foamEtcFile)
      <case>/         $FOAM_CASE/
      <constant>/     $FOAM_CASE/constant/
      <system>/       $FOAM_CASE/system/

These can be used in fileName expansions to improve clarity and reduce
some typing

     "<constant>/reactions"   vs  "$FOAM_CASE/constant/reactions"
2018-04-10 13:41:41 +02:00
Mark Olesen
f0435beb9c Merge remote-tracking branch 'origin/master' into develop 2018-03-16 23:38:29 +01:00
Andrew Heather
b0c5608b62 TUT: Corrected turbulence Ck value - see #753 2018-03-13 12:32:16 +00:00
Andrew Heather
e78548352e TUT: Removed misleading comment in tutorial - see #746 2018-03-06 11:12:39 +00:00
Mark Olesen
451f8e0357 Merge remote-tracking branch 'origin/master' into develop 2018-03-07 18:08:07 +01:00
Mark Olesen
fe140cd6c5 TUT: test mode not respected (closes #710)
- now replaced 'if ! isTest' with 'if notTest' for most cases.
2018-02-20 12:54:44 +01:00
Andrew Heather
89d49f002a Merge branch 'master' into develop 2018-01-18 09:33:40 +00:00
Andrew Heather
e3c4696a6e TUT: Updated Allrun scripts for tests. Fixes #710 2018-01-17 15:30:49 +00:00
Mark Olesen
534c173a09 TUT: cleanup lumpedPointMotion copied/derived files (closes #683) 2018-01-03 10:48:17 +01:00
Andrew Heather
23af7e435a ENH: FFT - removed power-of-2 constraint on number of samples 2017-12-29 23:57:22 +00:00
mattijs
59caad90b9 BUG: decomposeParDict: missing coeffs 2017-12-28 13:49:58 +00:00
sergio
709d2f43b1 Addition of tutorial using energyTransport FO + ArrheniusBirdCarreau laminar transport 2017-12-18 16:12:48 -08:00
mattijs
ddde330884 ENH: overset: new solvers, new stencil 2017-12-08 16:00:02 +00:00
Andrew Heather
ee06a687eb TUT: Corrected file header 2018-05-16 16:15:50 +01:00
Henry Weller
8165c462cd ENH: freestreamPressure, freestreamVelocity: New blended boundary conditions for the freestream
These BCs blend between typical inflow and outflow conditions based on the
velocity orientation.

airFoil2D tutorial updated to demonstrate these new BCs.
2018-02-23 12:23:06 +00:00
Henry Weller
fe4752d28a ENH: ddtScheme::fvcDdtPhiCoeff: Improved formulation providing better stability/accuracy balance
Resolves problem with pressure "staggering" when running with a very Courant
number.
2018-01-08 21:35:00 +00:00
Andrew Heather
dcad66f7d3 INT: Additional integration updates/clean-up 2018-05-14 13:21:22 +01:00
Henry Weller
81cea09983 ENH: pimpleDyMFoam: Improved efficiency and consistency when running on a static mesh
Now pimpleDyMFoam is exactly equivalent to pimpleFoam when running on a
staticFvMesh.  Also when the constant/dynamicMeshDict is not present a
staticFvMesh is automatically constructed so that the pimpleDyMFoam solver can
run any pimpleFoam case without change.

pimpleDyMFoam: Store Uf as an autoPtr for better error handling

pimpleFoam: Set initial deltaT from the Courant number

for improved stability on start-up and compatibility with pimpleDyMFoam

ENH: pimpleFoam: Merged dynamic mesh functionality of pimpleDyMFoam into pimpleFoam

and replaced pimpleDyMFoam with a script which reports this change.

The pimpleDyMFoam tutorials have been moved into the pimpleFoam directory.

This change is the first of a set of developments to merge dynamic mesh
functionality into the standard solvers to improve consistency, usability,
flexibility and maintainability of these solvers.

Henry G. Weller
CFD Direct Ltd.

tutorials/incompressible/pimpleFoam: Updated pimpleDyMFoam tutorials to run pimpleFoam

Renamed tutorials/incompressible/pimpleFoam/RAS/wingMotion/wingMotion2D_pimpleDyMFoam

-> tutorials/incompressible/pimpleFoam/RAS/wingMotion/wingMotion2D_pimpleFoam
2017-11-18 01:13:48 +00:00
Andrew Heather
6b97bf54ab TUT: Adding Alltest scripts 2017-12-05 12:19:47 +00:00
Mark Olesen
a9ffcab5af ENH: region-wise decomposition specification for decomposeParDict
Within decomposeParDict, it is now possible to specify a different
  decomposition method, methods coefficients or number of subdomains
  for each region individually.

  The top-level numberOfSubdomains remains mandatory, since this
  specifies the number of domains for the entire simulation.
  The individual regions may use the same number or fewer domains.

  Any optional method coefficients can be specified in a general
  "coeffs" entry or a method-specific one, eg "metisCoeffs".

  For multiLevel, only the method-specific "multiLevelCoeffs" dictionary
  is used, and is also mandatory.

----

ENH: shortcut specification for multiLevel.

  In addition to the longer dictionary form, it is also possible to
  use a shorter notation for multiLevel decomposition when the same
  decomposition method applies to each level.
2017-11-09 12:30:24 +01:00
Mark Olesen
966a941a64 ENH: fix foamListTimes to work with -fileHandler collated 2017-11-26 15:23:02 +01:00
Prashant
4bc9c98695 STYLE: Corrected file name in surface noise, added README file 2017-11-07 16:08:30 +05:30
Mark Olesen
4e48beffd4 ENH: support "one-shot" changes to the dictionary inputMode (issue #429)
- Instead of relying on #inputMode to effect a global change it is now
  possible (and recommended) to a temporary change in the inputMode
  for the following entry.

     #default   : provide default value if entry is not already defined
     #overwrite : silently remove a previously existing entry
     #warn      : warn about duplicate entries
     #error     : error if any duplicate entries occur
     #merge     : merge sub-dictionaries when possible (the default mode)

  This is generally less cumbersome than the switching the global
  inputMode. For example to provide a set of fallback values.

      #includeIfPresent "user-files"
      ...
      #default value uniform 10;

  vs.

      #includeIfPresent "user-files"
      #inputMode protect
      ...
      value uniform 10;
      #inputMode merge    // _Assuming_ we actually had this before

  These directives can also be used to suppress the normal dictionary
  merge semantics:

     #overwrite dict { entry val; ... }
2017-07-29 17:44:22 +02:00
Mark Olesen
c792a9d7df TUT: script cleanup, provide cleanCase0 for commonly used operation 2017-10-12 19:20:56 +02:00
Mark Olesen
85f5fb730f TUT: avoid backticks in scripts
- consistent versions in headers
2017-10-05 14:27:48 +02:00
Andrew Heather
e48f3d6d52 BUG: Added missing #include. See #600 2017-09-26 09:29:45 +01:00
Henry Weller
f80334415c sixDoFRigidBodyState: New functionObject which writes the rigid-body state
Based on code contributed by SeongMo Yeon
Resolves feature request https://bugs.openfoam.org/view.php?id=2656
2017-09-09 19:00:56 +01:00
Andrew Heather
d7fd550e61 ENH: Reinstated the wallBoundedStreamline function object
Note: performs its own tracking and does not rely on the base
particle::trackXXX functions, and uses a local particle position.

Look to update to barycentric tracking in the future.
2017-09-14 12:02:03 +01:00
Will Bainbridge
743dea87d2 Lagrangian: Rewrite of the particle tracking algorithm to function in
terms of the local barycentric coordinates of the current tetrahedron,
rather than the global coordinate system.

Barycentric tracking works on any mesh, irrespective of mesh quality.
Particles do not get "lost", and tracking does not require ad-hoc
"corrections" or "rescues" to function robustly, because the calculation
of particle-face intersections is unambiguous and reproducible, even at
small angles of incidence.

Each particle position is defined by topology (i.e. the decomposed tet
cell it is in) and geometry (i.e. where it is in the cell). No search
operations are needed on restart or reconstruct, unlike when particle
positions are stored in the global coordinate system.

The particle positions file now contains particles' local coordinates
and topology, rather than the global coordinates and cell. This change
to the output format is not backwards compatible. Existing cases with
Lagrangian data will not restart, but they will still run from time
zero without any modification. This change was necessary in order to
guarantee that the loaded particle is valid, and therefore
fundamentally prevent "loss" and "search-failure" type bugs (e.g.,
2517, 2442, 2286, 1836, 1461, 1341, 1097).

The tracking functions have also been converted to function in terms
of displacement, rather than end position. This helps remove floating
point error issues, particularly towards the end of a tracking step.

Wall bounded streamlines have been removed. The implementation proved
incompatible with the new tracking algorithm. ParaView has a surface
LIC plugin which provides equivalent, or better, functionality.

Additionally, bug report <https://bugs.openfoam.org/view.php?id=2517>
is resolved by this change.
2017-04-28 08:03:44 +01:00
Mark Olesen
c2a0663cc7 TUT: use general 'scale' instead of 'convertToMeters' in blockMeshDict
- although this has been supported for many years, the tutorials
  continued to use "convertToMeters" entry, which is specific to blockMesh.
  The "scale" is more consistent with other dictionaries.

ENH:
- ignore "scale 0;" (treat as no scaling) for blockMeshDict,
  consistent with use elsewhere.
2017-08-03 06:38:30 +02:00
Pete Bachant
8f11aeabaf BUG: Fix viscosity in simpleFoam motorBike tutorial (fixes #550) 2017-07-27 19:55:12 -04:00
Mark Olesen
6afa62a6e4 STYLE: use shell 'command' instead of 'which' in tutorials 2017-07-07 16:00:57 +02:00
Mark Olesen
e7da4f0d07 TUT: adjust surfaceFeatureExtractDict to remove optional sub-dictionary
- as of v1706
  extractFromSurfaceCoeffs { ... } is an optional subdictionary
2017-07-07 15:41:18 +02:00
Andrew Heather
07d9d3fc04 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2017-06-29 14:18:41 +01:00
Andrew Heather
a900153f57 ENH: Added new vortexShed tutorial to show vortex shedding and use of the Curle function object 2017-06-29 14:18:19 +01:00
mattijs
191c8534e7 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2017-06-28 12:46:24 +01:00
mattijs
c5c48205fe BUG: pitzDaily: remove DebugSwitches 2017-06-28 12:46:01 +01:00
Mark Olesen
0f547660ce TUT: make it easier to perform dry runs for lumpedPointMotion 2017-06-28 12:16:38 +02:00
Andrew Heather
d415bf77bf Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2017-06-26 13:33:19 +01:00
Andrew Heather
4abc7a92ed STYLE: Header updates 2017-06-26 11:03:00 +01:00
Mark Olesen
491657047b TUT: simple tutorial demonstrating lumpedPointMotion 2017-06-23 14:52:27 +01:00
Mark Olesen
8005e2b4a2 ENH: add cloneParallelCase function into bin/tools/RunFunctions 2017-06-22 14:45:53 +01:00
mattijs
e17e8e4e96 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop
Conflicts:
	tutorials/basic/overLaplacianDyMFoam/heatTransfer/0.orig/T
	tutorials/basic/overLaplacianDyMFoam/heatTransfer/0.orig/zoneID
2017-06-22 09:48:31 +01:00
Mark Olesen
6ecddbe4a5 STYLE: use #includeEtc in tutorial cases
#includeEtc "caseDicts/setConstraintTypes"
 vs.
    #include "${WM_PROJECT_DIR}/etc/caseDicts/setConstraintTypes"
2017-06-21 16:42:57 +01:00
mattijs
cbbf08dc0d STYLE: tutorials: fix headers 2017-06-21 12:49:28 +01:00
sergio
6ff341b5f5 Adding alphaEqn.H with interpolation method.
Adding special alphaCourantNo for overlaping
Adding bounded term to UEq.H for overInterDyMFoam
Changing to NO_WRITE for the cellMask field
Changing twoSimpleRotors tutorial to open domain
2017-06-19 11:10:19 -07:00
mattijs
7c88c694df STYLE: vtkWrite: added comment 2017-06-14 15:34:05 +01:00
Andrew Heather
2dfd01ac7b Merge branch 'feature-paraview-vtk' into 'develop'
Feature paraview vtk

See merge request !116
2017-06-14 14:16:18 +01:00
Mark Olesen
7eec9f0dd6 STYLE: use standardized 0.orig/ for overset tutorials 2017-06-14 14:15:22 +02:00
mattijs
fd665b4a3c ENH: overset: Initial release of overset capability.
Adds overset discretisation to selected physics:
- diffusion : overLaplacianDyMFoam
- incompressible steady : overSimpleFoam
- incompressible transient : overPimpleDyMFoam
- compressible transient: overRhoPimpleDyMFoam
- two-phase VOF: overInterDyMFoam

The overset method chosen is a parallel, fully implicit implementation
whereby the interpolation (from donor to acceptor) is inserted as an
adapted discretisation on the donor cells, such that the resulting matrix
can be solved using the standard linear solvers.

Above solvers come with a set of tutorials, showing how to create and set-up
simple simulations from scratch.
2017-06-14 09:51:02 +01:00
Mark Olesen
98cc0fc004 ENH: upgrade writeVTK function object -> vtkWrite function object
- user-selectable format (vtk or vtu, ascii or binary)
- dictionary syntax closer to ensightWrite
- tutorial example in windAroundBuildings
2017-06-14 01:48:32 +02:00
Mark Olesen
0ea219adf5 TUT: consistent writeCompression option
- Use on/off vs longer compressed/uncompressed.
  For consistency, replaced yes/no with on/off.

- Avoid the combination of binary/compressed,
  which is disallowed and provokes a warning anyhow
2017-06-13 06:50:16 +02:00
sergio
852616ba88 interpolationTable: Correcting header documentation
fanPressureFvPatchScalarField.H:  Correcting header documentation
RAS/TJunctionFan/0.orig: Creating tutorial for fanPressure
Adding pRef and pValue for tutorial createZeroDirectory/snappyMultiRegionHeater
2017-06-12 13:53:52 -07:00
Andrew Heather
0a4733acab ENH: Tutorial updates 2017-05-18 14:47:00 +01:00
Andrew Heather
91b90da4f3 Integrated Foundation code to commit 104aac5 2017-05-17 16:35:18 +01:00
Henry Weller
5c51836501 The "<type>Coeffs" sub-dictionary is now optional for most model parameters
except turbulence and lagrangian which will also be updated shortly.

For example in the nonNewtonianIcoFoam offsetCylinder tutorial the viscosity
model coefficients may be specified in the corresponding "<type>Coeffs"
sub-dictionary:

transportModel  CrossPowerLaw;

CrossPowerLawCoeffs
{
    nu0         [0 2 -1 0 0 0 0]  0.01;
    nuInf       [0 2 -1 0 0 0 0]  10;
    m           [0 0 1 0 0 0 0]   0.4;
    n           [0 0 0 0 0 0 0]   3;
}

BirdCarreauCoeffs
{
    nu0         [0 2 -1 0 0 0 0]  1e-06;
    nuInf       [0 2 -1 0 0 0 0]  1e-06;
    k           [0 0 1 0 0 0 0]   0;
    n           [0 0 0 0 0 0 0]   1;
}

which allows a quick change between models, or using the simpler

transportModel  CrossPowerLaw;

nu0         [0 2 -1 0 0 0 0]  0.01;
nuInf       [0 2 -1 0 0 0 0]  10;
m           [0 0 1 0 0 0 0]   0.4;
n           [0 0 0 0 0 0 0]   3;

if quick switching between models is not required.

To support this more convenient parameter specification the inconsistent
specification of seedSampleSet in the streamLine and wallBoundedStreamLine
functionObjects had to be corrected from

    // Seeding method.
    seedSampleSet   uniform;  //cloud; //triSurfaceMeshPointSet;

    uniformCoeffs
    {
        type        uniform;
        axis        x;  //distance;

        // Note: tracks slightly offset so as not to be on a face
        start       (-1.001 -0.05 0.0011);
        end         (-1.001 -0.05 1.0011);
        nPoints     20;
    }

to the simpler

    // Seeding method.
    seedSampleSet
    {
        type        uniform;
        axis        x;  //distance;

        // Note: tracks slightly offset so as not to be on a face
        start       (-1.001 -0.05 0.0011);
        end         (-1.001 -0.05 1.0011);
        nPoints     20;
    }

which also support the "<type>Coeffs" form

    // Seeding method.
    seedSampleSet
    {
        type        uniform;

        uniformCoeffs
        {
            axis        x;  //distance;

            // Note: tracks slightly offset so as not to be on a face
            start       (-1.001 -0.05 0.0011);
            end         (-1.001 -0.05 1.0011);
            nPoints     20;
        }
    }
2017-04-20 09:14:48 +01:00
Henry Weller
af2810149e porosityModel: The "<porosityModel>Coeffs" sub-dictionary is now optional
For example the porosity coefficients may now be specified thus:

porosity1
{
    type            DarcyForchheimer;

    cellZone        porosity;

    d   (5e7 -1000 -1000);
    f   (0 0 0);

    coordinateSystem
    {
        type    cartesian;
        origin  (0 0 0);
        coordinateRotation
        {
            type    axesRotation;
            e1      (0.70710678 0.70710678 0);
            e2      (0 0 1);
        }
    }
}

rather than

porosity1
{
    type            DarcyForchheimer;
    active          yes;
    cellZone        porosity;

    DarcyForchheimerCoeffs
    {
        d   (5e7 -1000 -1000);
        f   (0 0 0);

        coordinateSystem
        {
            type    cartesian;
            origin  (0 0 0);
            coordinateRotation
            {
                type    axesRotation;
                e1      (0.70710678 0.70710678 0);
                e2      (0 0 1);
            }
        }
    }
}

support for which is maintained for backward compatibility.
2017-04-13 14:00:00 +01:00
Henry Weller
8b55ea4fb1 fvOptions: The "<type>Coeffs" sub-dictionary is now optional
For example the actuationDiskSource fvOption may now be specified

disk1
{
    type            actuationDiskSource;

    fields      (U);

    selectionMode   cellSet;
    cellSet         actuationDisk1;
    diskDir         (1 0 0);    // Orientation of the disk
    Cp              0.386;
    Ct              0.58;
    diskArea        40;
    upstreamPoint   (581849 4785810 1065);
}

rather than

disk1
{
    type            actuationDiskSource;
    active          on;

    actuationDiskSourceCoeffs
    {
        fields      (U);

        selectionMode   cellSet;
        cellSet         actuationDisk1;
        diskDir         (1 0 0);    // Orientation of the disk
        Cp              0.386;
        Ct              0.58;
        diskArea        40;
        upstreamPoint   (581849 4785810 1065);
    }
}

but this form is supported for backward compatibility.
2017-04-13 13:30:17 +01:00
Andrew Heather
fb724ce113 MRG: Integrated Foundation code to commit 9f37c3c 2017-03-31 15:34:28 +01:00
Andrew Heather
45381b1085 MRG: Integrated Foundation code to commit 19e602b 2017-03-28 11:30:10 +01:00
Andrew Heather
436ec1cf1f MRG: Integrated Foundation code to commit ba4dbed 2017-03-23 12:11:49 +00:00
Chris Greenshields
6f5caf28d5 pitzDaily tutorials: updated blockMeshDict files to use multi-grading
The pitzDaily case uses a lot of mesh grading close to walls and the shear layer.
Prior to v2.4, blockMesh only permitted grading in one direction within a single block,
so the pitzDaily mesh comprised of 13 blocks to accommodate the complex grading pattern.

blockMesh has multi-grading that allows users to divide a block in a given direction and
apply different grading within each division.  The mesh generated with blockMesh using
13 blocks has been replaced with a mesh of 5 blocks that use multi-grading.  The new
blockMeshDict configuration produces a mesh very similar to the original 13-block mesh.
2017-03-17 12:42:13 +00:00
Henry Weller
7f5c135020 wingMotion tutorial: Corrected fvSolution file 2017-03-09 23:11:30 +00:00
Henry Weller
1be5f699e5 decomposePar: Added 'copyZero' option
Using

decomposePar -copyZero

The mesh is decomposed as usual but the '0' directory is recursively copied to
the 'processor.*' directories rather than decomposing the fields.  This is a
convenient option to handle cases where the initial field files are generic and
can be used for serial or parallel running.  See for example the
incompressible/simpleFoam/motorBike tutorial case.
2017-03-08 11:48:06 +00:00
Henry Weller
7aed8c2904 tutorials: Updated pcorr settings in fvSolution to provide pcorrFinal if required 2017-03-07 11:48:20 +00:00
Henry Weller
55e7a77ac6 tutorials/incompressible/pisoFoam/LES/motorBike/motorBike/Allrun: Remove previous 0 directories
Patch contributed by Mattijs Janssens
2017-03-06 23:18:13 +00:00
Henry Weller
fe548839c5 tutorials/incompressible/pisoFoam/LES/motorBike: Removed unused $1 arguments to xargs
Resolves bug-report https://bugs.openfoam.org/view.php?id=2475
2017-02-28 11:27:28 +00:00
mark
9e2e111518 STYLE: adjust ordering of 'find' command arguments
- use -name test before -type test to avoid calling stat(2) on every file.
- use -delete instead of -exec rm to avoid forking
2017-02-21 19:19:04 +01:00
Mark Olesen
d3911dd167 STYLE: avoid old-style shell backticks in various places 2017-02-20 09:30:58 +01:00
Mark Olesen
ec94c078e3 BUG: STL patch names not being passed through
- regression introduced by a719528832

STYLE: add meaningful solid names for some stl files
2017-02-03 09:33:22 +00:00
Henry Weller
4e5dc43418 snappyHexMesh: Added "noRefinement" writeFlag to control the writing of cellLevel, pointLevel etc. files
By default snappyHexMesh writes files relating to the hex-splitting process into
the polyMesh directory: cellLevel level0Edge pointLevel surfaceIndex

but by setting the noRefinement flag:

writeFlags
(
    noRefinement
    .
    .
    .
);

these optional files which are generally not needed are not written.

If you run the three stages of snappyHexMesh separately or run a dynamic mesh
solver supporting refinement and unrefinement these files are needed
and "noRefinement" should not be set.
2017-01-24 22:28:36 +00:00
Andrew Heather
28e37bbec9 STYLE: Consistency updates 2016-12-16 14:36:48 +00:00
Andrew Heather
30d8fc3459 ENH: Tutorial updates and clean-up 2016-12-16 13:26:28 +00:00
Andrew Heather
7e985a9b7c BUG: tutorial - corrected runTimePostProcessing intput. See #340 2016-12-15 16:28:36 +00:00
Andrew Heather
ad807e8d31 BUG: Updates to DyM tutorials - see #340 2016-12-13 12:40:58 +00:00
Henry Weller
d2f6f7e391 tutorials/incompressible/pisoFoam/les/motorBike/motorBike/Allrun: Removed spurious '-parallel' option
Resolves bug-report http://bugs.openfoam.org/view.php?id=2378
2016-12-07 15:39:40 +00:00
Henry Weller
445513a1dc mixerVesselAMI2D/constant/dynamicMeshDict: Removed unused motionSolverLibs entry 2016-12-01 16:13:18 +00:00
Henry Weller
1c687baa35 dynamicMotionSolverListFvMesh: New mesh-motion solver supporting multiple moving regions
e.g. the motion of two counter-rotating AMI regions could be defined:

dynamicFvMesh   dynamicMotionSolverListFvMesh;

solvers
(
    rotor1
    {
        solver solidBody;

        cellZone        rotor1;

        solidBodyMotionFunction  rotatingMotion;
        rotatingMotionCoeffs
        {
            origin        (0 0 0);
            axis          (0 0 1);
            omega         6.2832; // rad/s
        }
    }

    rotor2
    {
        solver solidBody;

        cellZone        rotor2;

        solidBodyMotionFunction  rotatingMotion;
        rotatingMotionCoeffs
        {
            origin        (0 0 0);
            axis          (0 0 1);
            omega         -6.2832; // rad/s
        }
    }
);

Any combination of motion solvers may be selected but there is no special
handling of motion interaction; the motions are applied sequentially and
potentially cumulatively.

To support this new general framework the solidBodyMotionFvMesh and
multiSolidBodyMotionFvMesh dynamicFvMeshes have been converted into the
corresponding motionSolvers solidBody and multiSolidBody and the tutorials
updated to reflect this change e.g. the motion in the mixerVesselAMI2D tutorial
is now defined thus:

dynamicFvMesh   dynamicMotionSolverFvMesh;

solver solidBody;

solidBodyCoeffs
{
    cellZone        rotor;

    solidBodyMotionFunction  rotatingMotion;
    rotatingMotionCoeffs
    {
        origin        (0 0 0);
        axis          (0 0 1);
        omega         6.2832; // rad/s
    }
}
2016-12-01 15:57:15 +00:00
Andrew Heather
c0f44ac4f3 MRG: Integrated foundation code 2016-12-12 12:10:29 +00:00
Andrew Heather
b7ea6ee24e Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-24 12:05:24 +00:00
Andrew Heather
9316088550 STYLE: Relocated DFSEM tutorial 2016-11-24 12:05:12 +00:00
Mark Olesen
58fad3ab79 BUG: snappyHexMesh with -decomposeParDict option (issue #265)
- only occurs in combination with distributedTriSurfaceMesh in snappy.

- workaround similar to that previously used for surfaceRedistributePar
  (issue #60).

Minor adjustment of incompressible motorBike tutorial to detect use of
distributedTriSurfaceMesh.
2016-11-24 12:02:11 +01:00
Andrew Heather
558006afd2 BUG: Corrections to commit 1f826361 for issue #306 2016-11-22 15:12:10 +00:00
Andrew Heather
1f826361c6 STYLE: Consistency updates to change input of <var>Name to <var>. Fixes #306 2016-11-22 14:50:33 +00:00
sergio
143e99194f ENH: Adding functionality to scalarTransport FO and residence time tutorials for VOF
and single phase cases. Registration of the compressed flux in interFoam as it is
needed for the FO if used.
2016-11-21 09:21:45 -08:00
Mark Olesen
a6a90838fa STYLE: adjust tutorial Allrun scripts (issue #310)
- A few without a 'cd' at the start.
  Use $(getApplication) directly in more places (for clarity).
2016-11-21 10:18:00 +01:00
Mark Olesen
21679c04e4 STYLE: adjust tutorial Allclean scripts (issue #310)
- A few without a 'cd' at the start.
  Several remove files that are already covered by the cleanCase function.
2016-11-20 17:26:44 +01:00
Mark Olesen
f3cc16e42c ENH: Avoid constant/polyMesh/blockMeshDict (issue #309)
- relocate to system/blockMeshDict, which avoids it being cleaned out
  accidentally
2016-11-20 16:50:47 +01:00
Mark Olesen
8b4dfe24f1 Merge remote-tracking branch 'origin/decomposeParDict' into develop 2016-11-19 15:34:36 +01:00
Henry Weller
80db302666 Allwmake: Remove 'set -x' which generates a lot of noise
'set -x' should be used for debugging.

Added command printing into wmake and Allwmake as a replacement for
'set -x' to log current target.
2016-11-13 18:08:22 +00:00
Mark Olesen
f0107b47f5 Merge branch 'ensight-preview' into 'develop'
Reworking of the ensight infrastructue and new ensightWrite function object



See merge request !70
2016-11-03 08:24:52 +00:00
Andrew Heather
b9d5e5bab1 STYLE: tutorial updates 2016-11-01 16:55:58 +00:00
Andrew Heather
99151638e3 STYLE: moved les tut file to LES directory 2016-11-01 15:36:11 +00:00
Mark Olesen
aca0b1ca04 COMP: ensight writer compilation for 64-bit labels (issue #263)
GIT: added missing source file.

ENH: add tutorial example under incompressible/simpleFoam/motorBike
2016-10-28 11:49:05 +02:00
Andrew Heather
af81184ecf MRG: Resolve conflict with latest foundation merge 2016-10-26 15:37:15 +01:00
Mark Olesen
52d0289ee1 BUG: resolve some decomposeParDict problems (issues #60, #265).
- Cleanup/centralize handling of -decomposeParDict by relocating
  common code into argList. Ensures that all processes receive
  identical information about the -decomposeParDict opton.

- Only use alternative decomposeParDict for simpleFoam/motorBike
  tutorial so that this will be included in the test loop for snappy.

- Added Mattijs' fix for surfaceRedistributePar.
2016-10-25 18:19:19 +02:00
Henry Weller
12d0707b84 foamCleanTutorials: Simplified cleaning the mesh by removing the constant/polyMesh directory 2016-10-13 15:02:32 +01:00
Andrew Heather
e98e372f8e ENH: Tutorial updates 2016-09-30 15:31:35 +01:00
Andrew Heather
bd0e982d99 MRG: Initial commit after latest Foundation merge 2016-09-30 11:16:28 +01:00
Andrew Heather
3dbd39146c STYLE: consistency updates 2016-09-27 15:17:55 +01:00
Andrew Heather
89d9fd1550 ENH: Tutorial updates 2016-09-26 13:00:49 +01:00
Andrew Heather
ad1e798293 ENH: Initial testing updates 2016-09-26 09:28:31 +01:00
Henry Weller
fdece9b2ce tutorials/incompressible/shallowWaterFoam/squareBump/.gmtcommands4: deleted
Resolves bug-report http://bugs.openfoam.org/view.php?id=2268
2016-09-25 16:53:37 +01:00
Andrew Heather
1fbcb686ff STYLE: Consistency updates 2016-09-23 16:52:46 +01:00
Henry Weller
1e94682f24 tutorials: Renamed sub-directories ras -> RAS and les -> LES 2016-09-20 19:03:40 +01:00
Chris Greenshields
bb3c0c3593 Maxwell model for viscoelasticity using the upper-convected time
derivative of the stress tensor.  See
http://en.wikipedia.org/wiki/Upper-convected_Maxwell_model

The model includes an additional viscosity (nu) from the transport
model from which it is instantiated, which makes it equivalent to the
Oldroyd-B model for the case of an incompressible transport model.
See https://en.wikipedia.org/wiki/Oldroyd-B_model
2016-09-20 18:38:15 +01:00
Chris Greenshields
6baa2aaf58 Organisation of pimpleFoam tutorials into categories of turbulence modelling 2016-09-20 18:24:09 +01:00
Andrew Heather
9fbd612672 GIT: Initial state after latest Foundation merge 2016-09-20 14:49:08 +01:00
Henry Weller
0857f479a8 PBiCGStab: New preconditioned bi-conjugate gradient stabilized solver for asymmetric lduMatrices
using a run-time selectable preconditioner

References:
    Van der Vorst, H. A. (1992).
    Bi-CGSTAB: A fast and smoothly converging variant of Bi-CG
    for the solution of nonsymmetric linear systems.
    SIAM Journal on scientific and Statistical Computing, 13(2), 631-644.

    Barrett, R., Berry, M. W., Chan, T. F., Demmel, J., Donato, J.,
    Dongarra, J., Eijkhout, V., Pozo, R., Romine, C. & Van der Vorst, H.
    (1994).
    Templates for the solution of linear systems:
    building blocks for iterative methods
    (Vol. 43). Siam.

See also: https://en.wikipedia.org/wiki/Biconjugate_gradient_stabilized_method

Tests have shown that PBiCGStab with the DILU preconditioner is more
robust, reliable and shows faster convergence (~2x) than PBiCG with
DILU, in particular in parallel where PBiCG occasionally diverges.

This remarkable improvement over PBiCG prompted the update of all
tutorial cases currently using PBiCG to use PBiCGStab instead.  If any
issues arise with this update please report on Mantis: http://bugs.openfoam.org
2016-09-05 11:46:42 +01:00
Andrew Heather
bc5c6d83df BUG: incompressible/icoFoam/cavityMappingTest - renamed Allrun-serial->Allrun. Fixes #220 2016-08-25 13:34:17 +01:00
Henry Weller
32fe670d1e tutorials/incompressible/boundaryFoam/boundaryWallFunctionsProfile: Corrected typo
Resolves bug-report http://bugs.openfoam.org/view.php?id=2170
2016-08-01 20:10:19 +01:00
Henry Weller
04f73903b4 tutorials/incompressible/simpleFoam/T3A: ERCOFTAC T3A 3% test-case for the kOmegaSSTLM model
References:
    Savill, A. M. (1993).
    Some recent progress in the turbulence modelling of by-pass transition.
    Near-wall turbulent flows, 829-848.

    Savill, A. M. (1996).
    One-point closures applied to transition.
    In Turbulence and transition modelling (pp. 233-268).
    Springer Netherlands.

Based on case contributed by Florian Schwertfirm, Kreuzinger und Manhart Turbulenz GmbH.
2016-07-29 10:51:42 +01:00
Andrew Heather
ff0557cf22 BUG: ensight output - corrected mask 2016-06-30 23:05:23 +01:00
Mark Olesen
6d71d03f44 ENH: default to collateTimes on for ensight output
- the uncollated version becomes quite difficult to process.

  Caveat: cannot use "collateTimes true" for non-static geometries
2016-06-30 15:32:21 +02:00
Henry Weller
9fdb5506f4 timeVaryingMappedFixedValueFvPatchField: Simplifed for consistency with the output of sampledPlane
Now a case can be sampled and written in 'foam' format and used for the
timeVaryingMappedFixedValue BC of another case.
2016-06-30 10:35:01 +01:00
Andrew Heather
038356cdda Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-06-29 21:37:10 +01:00
Andrew Heather
208de6b320 ENH: Added new mapFields function object 2016-06-29 21:34:33 +01:00
Henry Weller
6d330d3d12 tutorials: Updated formatting of dictionaries and specification of 'plane' and 'samplePlane' 2016-06-29 18:02:57 +01:00
Mark Olesen
6e6ed0ca94 STYLE: cleanup rhoPorousSimpleFoam tutorial case
- better cleanup, avoid collisions between implicit and explicit cases
2016-06-29 14:21:02 +02:00
Mark Olesen
820f809bd5 STYLE: cleanup handling of 0.org directories (in parallel)
- remove duplicate 0/ files from the repository
2016-06-29 13:34:36 +02:00
Mark Olesen
1988e4bb60 STYLE: avoid backticks for getApplication 2016-06-27 17:50:55 +02:00
Mark Olesen
dd60cfcd06 FIX: provide restore0Dir function to fix issue #159
- makes it easier to ensure the correct behaviour, consistently
2016-06-27 16:33:55 +02:00
Andrew Heather
dd3fb6225f ENH: Tutorials - added new channel tutorial to show turbulence DFSEM inlet behaviour 2016-06-28 15:49:18 +01:00
Chris Greenshields
aa12a81474 pitzDaily tutorial: replaced streamline function object
with new #includeFunc directive
2016-06-17 08:18:41 +01:00
Henry Weller
64aa9925e4 totalPressureFvPatchScalarField, uniformTotalPressureFvPatchScalarField: simplified and rationalized
The modes of operation are set by the dimensions of the pressure field
    to which this boundary condition is applied, the \c psi entry and the value
    of \c gamma:
    \table
        Mode                    | dimensions | psi   | gamma
        incompressible subsonic | p/rho      |       |
        compressible subsonic   | p          | none  |
        compressible transonic  | p          | psi   | 1
        compressible supersonic | p          | psi   | > 1
    \endtable

    For most applications the totalPressure boundary condition now only
    requires p0 to be specified e.g.
    outlet
    {
        type            totalPressure;
        p0              uniform 1e5;
    }
2016-06-16 12:21:34 +01:00
Henry Weller
3d98d6e5c6 changeDictionary: Simplified by removing the need for the superfluous dictionaryReplacement sub-dictionary
Added the option '-subDict' to specify a sub-dictionary if multiple
replacement sets are present in the same file.  This also provides
backward compatibility by setting '-subDict dictionaryReplacement'
2016-06-15 09:03:05 +01:00
Chris Greenshields
344f435f54 Tutorials fvSolution files: removed solver entries which use default
values; formatted Switch entries consistently across all cases
2016-06-15 07:39:12 +01:00
Chris Greenshields
3d810c11dc Tutorials: made laplacianSchemes consistent and correct 2016-06-13 23:38:03 +01:00
Henry Weller
de02a089ba tutorials: Removed references to 'sampleDict' 2016-06-13 14:53:56 +01:00
Chris Greenshields
cc151ce9a0 pimpleDyMFoam/mixerVesselAMI2D: removed redundant coefficient 2016-06-13 13:12:24 +01:00
Henry Weller
83321bd4f7 functionObjects: renamed faceSource -> surfaceRegion, cellSource -> volRegion
The use of the term 'source' in the context of post-processing is
confusing and does not properly describe the process of region
selection.  The new names 'surfaceRegion' and 'volRegion' better
describe the purpose of the functionObjects which is to provide field
processing functionality limited to a specified region of space, either
a surface or volume.

The keyword 'source' is renamed 'regionType' which better describes the
purpose which is to specify the method by which the surface or volume
region is selected.

The keyword to select the name of the surface or volume region is
renamed from 'sourceName' to 'name' consistent with the other
name-changes above.
2016-06-12 20:56:51 +01:00
Henry Weller
43b3fa2ce3 functionObjects::scalarTransport: simplified, standardized, rationalized
tutorials/incompressible/pisoFoam/les/pitzDaily: Added scalarTransport
functionObject to demonstrate the new functionality
2016-06-08 15:11:57 +01:00
Chris Greenshields
ee6188ed09 Removed fixedWalls from cuttingPatches because it is redundant now fixedWalls is noSlip 2016-06-08 14:08:26 +01:00
Chris Greenshields
c32f4fef00 Corrected RAS cavity case to be consistent with User Guide tutorial 2016-06-08 14:01:50 +01:00
Henry Weller
dd281330bc foamInfoExec: Time listing functionality superseded by foamListTimes 2016-06-03 19:23:27 +01:00
Henry Weller
ea6d010f51 tutorials/incompressible/pimpleDyMFoam/propeller: Use the standard 'Q' functionObject configuration 2016-05-31 21:21:41 +01:00
Henry Weller
d438da1eb7 ACMI: Corrected conservation issue
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2057
2016-05-30 08:29:11 +01:00
Henry Weller
e4dc50dcb0 postProcessing: Replaced 'foamCalc' and the 'postCalc' utilities
with the more general and flexible 'postProcess' utility and '-postProcess' solver option

Rationale
---------

Both the 'postProcess' utility and '-postProcess' solver option use the
same extensive set of functionObjects available for data-processing
during the run avoiding the substantial code duplication necessary for
the 'foamCalc' and 'postCalc' utilities and simplifying maintenance.
Additionally consistency is guaranteed between solver data processing
and post-processing.

The functionObjects have been substantially re-written and generalized
to simplify development and encourage contribution.

Configuration
-------------

An extensive set of simple functionObject configuration files are
provided in

OpenFOAM-dev/etc/caseDicts/postProcessing

and more will be added in the future.  These can either be copied into
'<case>/system' directory and included into the 'controlDict.functions'
sub-dictionary or included directly from 'etc/caseDicts/postProcessing'
using the '#includeEtc' directive or the new and more convenient
'#includeFunc' directive which searches the
'<etc>/caseDicts/postProcessing' directories for the selected
functionObject, e.g.

functions
{
    #includeFunc Q
    #includeFunc Lambda2
}

'#includeFunc' first searches the '<case>/system' directory in case
there is a local configuration.

Description of #includeFunc
---------------------------

    Specify a functionObject dictionary file to include, expects the
    functionObject name to follow (without quotes).

    Search for functionObject dictionary file in
    user/group/shipped directories.
    The search scheme allows for version-specific and
    version-independent files using the following hierarchy:
    - \b user settings:
      - ~/.OpenFOAM/\<VERSION\>/caseDicts/postProcessing
      - ~/.OpenFOAM/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is set):
      - $WM_PROJECT_SITE/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_SITE/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is not set):
      - $WM_PROJECT_INST_DIR/site/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_INST_DIR/site/caseDicts/postProcessing
    - \b other (shipped) settings:
      - $WM_PROJECT_DIR/etc/caseDicts/postProcessing

    An example of the \c \#includeFunc directive:
    \verbatim
        #includeFunc <funcName>
    \endverbatim

postProcess
-----------

The 'postProcess' utility and '-postProcess' solver option provide the
same set of controls to execute functionObjects after the run either by
reading a specified set of fields to process in the case of
'postProcess' or by reading all fields and models required to start the
run in the case of '-postProcess' for each selected time:

postProcess -help

Usage: postProcess [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

 pimpleFoam -postProcess -help

Usage: pimpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

The functionObjects to execute may be specified on the command-line
using the '-func' option for a single functionObject or '-funcs' for a
list, e.g.

postProcess -func Q
postProcess -funcs '(div(U) div(phi))'

In the case of 'Q' the default field to process is 'U' which is
specified in and read from the configuration file but this may be
overridden thus:

postProcess -func 'Q(Ua)'

as is done in the example above to calculate the two forms of the divergence of
the velocity field.  Additional fields which the functionObjects may depend on
can be specified using the '-field' or '-fields' options.

The 'postProcess' utility can only be used to execute functionObjects which
process fields present in the time directories.  However, functionObjects which
depend on fields obtained from models, e.g. properties derived from turbulence
models can be executed using the '-postProcess' of the appropriate solver, e.g.

pisoFoam -postProcess -func PecletNo

or

sonicFoam -postProcess -func MachNo

In this case all required fields will have already been read so the '-field' or
'-fields' options are not be needed.

Henry G. Weller
CFD Direct Ltd.
2016-05-28 18:58:48 +01:00
Henry Weller
8b3b04b2f0 tutorials/incompressible/pimpleDyMFoam/propeller/system/Q: Updated 2016-05-22 19:03:23 +01:00
Henry Weller
3eec5854be Standardized the selection of required and optional fields in BCs, fvOptions, functionObjects etc.
In most boundary conditions, fvOptions etc. required and optional fields
to be looked-up from the objectRegistry are selected by setting the
keyword corresponding to the standard field name in the BC etc. to the
appropriate name in the objectRegistry.  Usually a default is provided
with sets the field name to the keyword name, e.g. in the
totalPressureFvPatchScalarField the velocity is selected by setting the
keyword 'U' to the appropriate name which defaults to 'U':

        Property     | Description             | Required    | Default value
        U            | velocity field name     | no          | U
        phi          | flux field name         | no          | phi
        .
        .
        .

However, in some BCs and functionObjects and many fvOptions another
convention is used in which the field name keyword is appended by 'Name'
e.g.

        Property     | Description             | Required    | Default value
        pName        | pressure field name     | no          | p
        UName        | velocity field name     | no          | U

This difference in convention is unnecessary and confusing, hinders code
and dictionary reuse and complicates code maintenance.  In this commit
the appended 'Name' is removed from the field selection keywords
standardizing OpenFOAM on the first convention above.
2016-05-21 20:28:20 +01:00
Henry Weller
83c7e97655 dynamicCode: Renamed 'redirectType' to 'name' to clarify the purpose
of the entry which is to provide the name of the generated class.

'redirectType' is supported for backward-compatibility.
2016-05-18 23:10:42 +01:00
Henry Weller
83bae2efd3 functionObjects: Renamed dictionary entry 'functionObjectLibs' -> 'libs'
This changes simplifies the specification of functionObjects in
controlDict and is consistent with the 'libs' option in controlDict to
load special solver libraries.

Support for the old 'functionObjectLibs' name is supported for backward compatibility.
2016-05-16 22:09:01 +01:00
Henry Weller
78d2971b21 functionObjects: rewritten to all be derived from 'functionObject'
- Avoids the need for the 'OutputFilterFunctionObject' wrapper
  - Time-control for execution and writing is now provided by the
    'timeControlFunctionObject' which instantiates the processing
    'functionObject' and controls its operation.
  - Alternative time-control functionObjects can now be written and
    selected at run-time without the need to compile wrapped version of
    EVERY existing functionObject which would have been required in the
    old structure.
  - The separation of 'execute' and 'write' functions is now formalized in the
    'functionObject' base-class and all derived classes implement the
    two functions.
  - Unnecessary implementations of functions with appropriate defaults
    in the 'functionObject' base-class have been removed reducing
    clutter and simplifying implementation of new functionObjects.
  - The 'coded' 'functionObject' has also been updated, simplified and tested.
  - Further simplification is now possible by creating some general
    intermediate classes derived from 'functionObject'.
2016-05-15 16:40:01 +01:00