Commit Graph

3320 Commits

Author SHA1 Message Date
Mark Olesen
a97628121c ENH: overhaul ensight handling (#1579)
- includes restructuring and simplification of low-level ensight part
  handling and refactor of backends to improve code reuse.

foamToEnsight
-------------

  * new cellZone support.
    This was previously only possible via a separate foamToEnsightParts
    utility that was not parallelized.

  * support for point fields.

  * `-nearCellValue` option (as per foamToVTK)

  * data indexing now uses values from the time index.
    This is consistent with the ensightWrite function object and
    can help with restarts.

  * existing ensight directories are removed, unless the -no-overwrite
    option is supplied

foamToEnsightParts
------------------
  * now redundant and removed.

ensightOutputSurface (new class)
--------------------------------
  * a lightweight wrapper for point/face references that is tailored
    for the ensightSurfaceWriter. It uses compact face/point information
    and is serial only, since this is the format requirements from the
    surfaceWriter class.

ensightMesh (revised class)
---------------------------
  * now only holds a polyMesh reference, which removes its dependency
    on finiteVolume and allows it to be relocated under fileFormats
    instead of conversion.

Removed classes: ensightParts, ensighPartFaces, ensightPartCells

- these were used by foamToEnsightParts, but not needed anymore.
2020-02-18 11:09:43 +00:00
mattijs
09db19c3f0 Merge remote-tracking branch 'origin/master' into develop 2020-02-12 17:13:34 +00:00
Andrew Heather
49e63378f8 TUT: corrected link to online case. Fixes #1584 2020-02-10 11:44:20 +00:00
Mark Olesen
531f6d9ea2 TUT: add inner-region cellZone to simpleFoam/motorBike
- useful for post-processing and data conversion tests
2020-02-07 17:00:20 +01:00
Kutalmis Bercin
cee3dab140 TUT: cleanup compressible tutorials
- for all tutorial cases:
     - correct/uniformize dict-style
     - rm redundant dict entries

 - compressible.overRhoPimpleDyMFoam.twoSimpleRotors: rm redundant file: pointDisplacement
 - compressible.overRhoSimpleFoam.hotCylinder
 - compressible.rhoCentralDyMFoam.movingCone
 - compressible.rhoCentralFoam.forwardStep: activate purgeWrite=10
 - compressible.rhoCentralFoam.LadenburgJet60psi: rm redundant files: mapFieldsDict & sample
 - compressible.rhoCentralFoam.shockTube: rm redundant file: sample; command: cleanSample
 - compressible.rhoPimpleFoam.laminar.sineWaveDamping: rm redundant file: V; activate purgeWrite=10
 - compressible.rhoPimpleFoam.LES.pitzDaily: activate purgeWrite=10
 - compressible.rhoPimpleFoam.RAS.aerofoilNACA0012: activate purgeWrite=10
 - compressible.rhoPimpleFoam.RAS.angledDuct: add Allclean
 - compressible.rhoPimpleFoam.RAS.mixerVessel2D: add Allclean; rm makeMesh
 - compressible.rhoPimpleFoam.RAS.angledDuctLTS: add Allclean
 - compressible.rhoPimpleFoam.RAS.TJunctionAverage
 - compressible.rhoPorousSimpleFoam.angledDuct
 - compressible.rhoSimpleFoam.aerofoilNACA0012
 - compressible.rhoSimpleFoam.angledDuctExplicitFixedCoeff
 - compressible.rhoSimpleFoam.squareBend
 - compressible.rhoSimpleFoam.gasMixing.injectorPipe
 - compressible.sonicDyMFoam.movingCone: rm redundant file: cuttingPlane
 - compressible.sonicFoam.laminar.shockTube
 - compressible.sonicFoam.RAS.nacaAirfoil
 - compressible.sonicFoam.RAS.prism
2020-01-29 12:26:36 +00:00
Kutalmis Bercin
f55da4b690 ENH: allow datToFoam writing points dict directly
- refactors the corresponding tutorial by removing redundant files and items:
    compressible/rhoCentralFoam/biconic25-55Run35
2020-01-29 12:26:36 +00:00
Mark Olesen
669f3de327 TUT: file cleanup 2020-01-17 08:11:05 +01:00
OpenFOAM bot
596e4aef3f STYLE: remove trailing space, tabs 2020-01-22 10:00:03 +01:00
Mattijs Janssens
b8c2c0acf6 ENH: shm: support for automatic faceZones 2020-01-16 12:22:02 +00:00
Mark Olesen
b0072bfab8 ENH: regIOobject store() now also registers the object
- previously the store() method just set the ownedByRegistry flag.
  Now ensure that it is indeed registered first.

- support register/store of tmp<> items.
  The tmp parameter is not cleared, but changed from PTR to CREF
  to allow further use.

  The implicit registration allows code simplification using the
  GeometricField::New factory method, for example.

  Old Code
  ========
      volScalarField* ptr = new volScalarField
      (
          IOobject
          (
              fieldName,
              mesh.time().timeName(),
              mesh,
              IOobject::NO_READ,
              IOobject::NO_WRITE,
              true  // Register
          ),
          mesh,
          dimless,
          zeroGradientFvPatchField<scalar>::typeName
      );
      ptr->store();

  New Code
  ========
      auto tptr = volScalarField::New
      (
          fieldName,
          mesh,
          dimless,
          zeroGradientFvPatchField<scalar>::typeName
      );
      regIOobject::store(tptr);

  or even
      regIOobject::store
      (
          volScalarField::New
          (
              fieldName,
              mesh,
              dimless,
              zeroGradientFvPatchField<scalar>::typeName
          )
      );
2020-01-13 15:37:25 +00:00
Kutalmis Bercin
a68333d695 TUT: simplify basic/overPotentialFoam/cylinder
BAKW: ensures bitwise backward compatibility
2020-01-10 09:44:38 +00:00
Kutalmis Bercin
b81106f837 TUT: enable purgeWrite in driftFluxFoam tuts to avoid numerous write-outs 2020-01-10 09:44:38 +00:00
Kutalmis Bercin
8504c813d0 TUT: remove redundant white-spaces in interFoam/motorBike 2020-01-10 09:44:38 +00:00
Kutalmis Bercin
152890d288 TUT: change residuals FO remnants to solverInfo FO (#1290) 2020-01-10 09:44:38 +00:00
Kutalmis Bercin
bda695d97a TUT: simplify basic/overLaplacianDyMFoam/heatTransfer
BAKW: ensure bitwise backward compatibility
2020-01-10 09:44:33 +00:00
Kutalmis Bercin
c399a4b3fb TUT: simplify basic/laplacianFoam/flange
BAKW: ensure bitwise backward compatibility
2020-01-09 17:19:36 +00:00
Andrew Heather
be38f5fb11 Merge remote-tracking branch 'origin/master' into develop 2020-01-03 15:09:00 +00:00
Kutalmis Bercin
e34a6e7df0 TUT: change output tag 'hill' to more consistent 'bump' 2020-01-03 09:40:58 +00:00
Kutalmis Bercin
ab0dd1f1a8 DEFEATURE: deprecate v2f model in favour of kEpsilonPhitF
- kEpsilonPhitF is a kEpsilon-based model which originated
    from (Durbin, 1995)’s v2-f methodology. However, the majority of
    v2-f model variants proved to be numerically stiff for segregated
    solution algorithms due to the coupled formulations of v2 and f fields,
    particularly on wall boundaries.

    The v2-f variant (i.e. OpenFOAM’s v2f model) due to
    (Lien and Kalitzin, 2001) reformulated the original v2-f model to enable
    segregated computations; however, a number of shortcomings regarding
    the model fidelity were reported in the literature.

    To overcome the shortcomings of the v2-f methodology, the v2-f approach
    was re-evaluated by (Laurence et al., 2005) by transforming v2 scale into
    its equivalent non-dimensional form, i.e. phit, to reduce the numerical
    stiffness.
    This variant, i.e. kEpsilonPhitF, is believed to provide numerical
    robustness, and insensitivity to grid anomalies while retaining the
    theoretical model fidelity of the original v2-f model.

    Accordingly the v2f RANS model is deprecated in favour of the variant
    kEpsilonPhitF model.
2020-01-03 09:40:58 +00:00
Vaggelis Papoutsis
254d38d772 BUG: continuation of updateMethods with empty activeDesignVariables
When activeDesignVariables are not set explicitly, all design variables
are treated as active. These were allocated properly when starting from
0 but not when starting from an intermediate optimisation cycle
(e.g. running 5 optimisation cycles, stopping and restarting).

TUT: added a new tutorial including the restart of an optimisation run
to help identify future regression
2020-01-03 09:38:11 +00:00
Vaggelis Papoutsis
c413ec5009 BUG: writeMorpherCPs expects a controlBoxes entry
The controlBoxes wordList was removed from NURBS3DVolume in the
pre-release phase but writeMorpherCPs was not updated accordingly.

TUT: added the invocation of writeMorpherCPs in one of the tutotials to
help identify future regression
2020-01-03 09:36:51 +00:00
Andrew Heather
ae2ab06312 REL: Release preparations 2019-12-23 09:49:23 +00:00
mattijs
df5a056fd3 GIT: interfaceTracking: relocate library 2019-12-19 15:32:34 +00:00
Zeljko Tukovic
e5ede7e8c5 TUT: interTrack tutorials in incompressible pimpleFoam 2019-12-19 15:32:34 +00:00
mattijs
9ab75c5c3b STYLE: weightedFlux: adapt for word input 2019-12-19 09:21:32 +00:00
sergio
7d89b72e26 TUT: Using rPolynomial Eq of State for water 2019-12-18 12:08:22 -08:00
Kutalmis Bercin
a3b5299b09 BUG: fix no-U/P iteration issue in TUT/simpleFoam/turbineSiting (#1114) 2019-12-18 15:47:19 +00:00
Kutalmis Bercin
e6238a5c62 TUT: add kEpsilonPhitF RAS model example to bump2D
- STYLE: remove redundant whitespaces
2019-12-18 15:47:19 +00:00
Gabriel Barajas
634e5329d8 INT: Added tutorial cases showcasing new multi-paddle wave maker extensions 2019-12-18 13:57:41 +00:00
sergio
4818af3bef TUT: Changing combustion models for fireFoam tutorial cases.
Changing to Eddy Dissipation Model the combustion casese
for fireFoam
2019-12-17 16:02:24 -08:00
Mark Olesen
9d63a1e7c4 TUT: examples for PDRsetFields 2019-12-16 21:50:58 +01:00
Norbert Weber
3b6ba059c3 TUT: verificationAndValidation for weightedFlux scheme (#1388) 2019-10-10 12:59:39 +02:00
Mark Olesen
75ba4a07ef STYLE: consistent quoting for 'cd' 2019-12-14 13:34:48 +01:00
sergio
84095ef631 ENH: Adding solarBeamWithTrees tutorial 2019-12-13 16:40:32 -08:00
Mark Olesen
6ce3e0bd67 BUG: expression BCs missing their variables on output 2019-12-13 15:49:25 +01:00
Mark Olesen
7aa2bf832f STYLE: header format 2019-12-13 12:33:23 +01:00
Mark Olesen
373ad6df0e ENH: additional feedback about controlled mesh motion update type
- ensure that the updateControl is "non-sticky" on re-read,
  even if we do not support runtime-modifiable here

STYLE: add syntax example (wingMotion), but with updateInterval 1
2019-12-13 10:02:57 +01:00
Andrew Heather
042c529f9f Merge branch 'feature-adjoint-shapeOptimisation' into 'develop'
ENH: New adjont shape optimisation functionality

See merge request Development/openfoam!307
2019-12-12 14:18:20 +00:00
Vaggelis Papoutsis
b863254308 ENH: New adjont shape optimisation functionality
The adjoint library is enhanced with new functionality enabling
automated shape optimisation loops.  A parameterisation scheme based on
volumetric B-Splines is introduced, the control points of which act as
the design variables in the optimisation loop [1, 2].  The control
points of the volumetric B-Splines boxes can be defined in either
Cartesian or cylindrical coordinates.

The entire loop (solution of the flow and adjoint equations, computation
of sensitivity derivatives, update of the design variables and mesh) is
run within adjointOptimisationFoam. A number of methods to update the
design variables are implemented, including popular Quasi-Newton methods
like BFGS and methods capable of handling constraints like loop using
the SQP or constraint projection.

The software was developed by PCOpt/NTUA and FOSS GP, with contributions from

Dr. Evangelos Papoutsis-Kiachagias,
Konstantinos Gkaragounis,
Professor Kyriakos Giannakoglou,
Andy Heather

[1] E.M. Papoutsis-Kiachagias, N. Magoulas, J. Mueller, C. Othmer,
K.C.  Giannakoglou: 'Noise Reduction in Car Aerodynamics using a
Surrogate Objective Function and the Continuous  Adjoint Method with
Wall Functions', Computers & Fluids, 122:223-232, 2015

[2] E. M. Papoutsis-Kiachagias, V. G. Asouti, K. C. Giannakoglou,
K.  Gkagkas, S. Shimokawa, E. Itakura: ‘Multi-point aerodynamic shape
optimization of cars based on continuous adjoint’, Structural and
Multidisciplinary Optimization, 59(2):675–694, 2019
2019-12-12 14:17:29 +00:00
Kutalmis Bercin
f9e5392171 BUG: fix tut regression for potentialFoam (#1518) 2019-12-12 11:22:13 +00:00
Kutalmis Bercin
64242fc096 TUT: generalise planarPoiseuille for all laminar models (#1509) 2019-12-12 11:22:13 +00:00
Kutalmis Bercin
be235787cf DOC: add missing tags into Stokes.H (#1509)
STYLE: add missing comment dashes, DOI
  DOC: add DOI into WatersKing.C
2019-12-12 11:22:13 +00:00
Mark Olesen
1847bd16be TUT: use fast topological search for channel395DFSEM blockMesh
- same result, but approx 4x faster for this case
2019-12-11 09:45:54 +01:00
Andrew Heather
e1a7c0ed1d ENH: Particle PatchPostProcessing - enable users to filter particle property output
The optional 'fields' entry can be used to limit which particle fields are
written to file.  If empty/not specified, all properties are written to
maintain backwards compatibility.

    patchPostProcessing1
    {
        type            patchPostProcessing;
        maxStoredParcels 20;
        fields          (position "U.*" d T nParticle);
        patches
        (
            cycLeft_half0
            cycLeft_half1
        );
    }
2019-12-09 23:31:01 +00:00
Andrew Heather
deeb27896c ENH: Added option to write particle patch interactions to file
File writing is off by default; to activate, add to the patch interaction model
coeff dictionary

    writeToFile yes;
2019-12-09 22:31:09 +00:00
Mark Olesen
44304e07d6 TUT: simple tutorial with expression boundary conditions and setExprFields 2019-12-10 13:09:22 +01:00
Mark Olesen
c2123452b1 ENH: generalize string expression evaluation
- replace stringOps::toScalar with a more generic stringOps::evaluate
  method that handles scalars, vectors etc.

- improve #eval to handle various mathematical operations.
  Previously only handled scalars. Now produce vectors, tensors etc
  for the entries. These tokens are streamed directly into the entry.
2019-12-09 19:44:23 +01:00
Andrew Heather
9a7adf3606 Merge branch 'master' into develop-v1906 2019-12-06 12:05:32 +00:00
Mark Olesen
9e6683f7bc ENH: add conditionals to #eval (string to scalar)
Example,

     ($radius > 10) ? sin(degToRad(45)) : cos(degToRad(30))

- protect division and modulo against zero-divide.

- add scanner/parser debugging switches in the namespace,
  selectable as "stringToScalar". For example,

    debug parser:  foamDictionary -debug-switch stringToScalar=2
    debug scanner: foamDictionary -debug-switch stringToScalar=4
    debug both:    foamDictionary -debug-switch stringToScalar=6
2019-11-19 14:22:03 +01:00
Mark Olesen
a5a222f7cf ENH: support scalar tokens when testing #if, #ifeq
- this allows use of #eval results in the tests
2019-11-19 09:00:00 +01:00