Commit Graph

1193 Commits

Author SHA1 Message Date
Andrew Heather
780c156103 REL: Updated config to v2006 2020-06-29 17:27:54 +01:00
Andrew Heather
538d749220 REL: Updated headers to version v2006 2020-06-29 17:27:54 +01:00
Mark Olesen
d93dd11ae4 ENH: add heatTransferCoeff caseDicts template (#1751) 2020-06-26 14:48:05 +02:00
Mark Olesen
cbcc87549e CONFIG: support openfoam -init=FILE
- useful for supporting a variety of different predefined
  configuration files. Bypasses the regular etc/bashrc entirely.

- minor refactoring in foamCreateModuleInclude
2020-06-23 15:35:52 +02:00
Mark Olesen
420be3f9ab CONFIG: improve handling of in-source PETSC installations
- when installed in-source, use PETSC_ARCH to find additional include
  directory and the correct library directory

CONFIG: bump to new hypre version

- add -hint option for have_adios2, have_hypre, have_petsc
2020-06-19 12:44:14 +02:00
Kutalmis Bercin
d0d3670d01 ENH: add missing/improve annotated dictionaries
New:
  - blockMeshDict
  - sampleDict
  - boxTurbDict
  - createBoxTurbDict
  - dsmcInitialiseDict
  - mdEquilibrationDict
  - mdInitialiseDict
  - obstaclesDict
  - optimisationDict
  - potentialDict
  - probesDict
  - sampleDict
  - setExprBoundaryFieldsDict
  - setExprFieldsDict

  Improved:
  - extrudeMeshDict
  - topoSetSourcesDict
2020-06-11 13:30:29 +01:00
Kutalmis Bercin
5cbdb7a3d7 INT: various integrations from openfoam.org
ENH: add log FO
  ENH: improve log with scale, and offset entries
  BUG: ensure extrueMesh does not fail in parallel with wedge extrusion
  BUG: add missing clone and mapping funcs to copiedFixedValue, fixedMultiPhaseHeatFlux
  ENH: meshToMesh0::cellAddressing slight speed up for some geometries
  BUG:0003495: Divide-by-zero in SHF particle break-up model
  BUG:0003492: The formula in the OF is inconsistent with the Rosin-Rammler distribution theory formula
2020-06-11 13:30:29 +01:00
mattijs
5bf440956a ENH: timeVaryingMapped: abstract IFstream/regIOobject handling. See #1640.
This change abstracts out the reading of "boundaryData". It should
now support OpenFOAM headers and with that also binary input.
2020-06-11 12:00:51 +01:00
mattijs
30ea38a77e ENH: shanppyHexMesh: disable gap detection on same surface. See #1463. 2020-06-10 15:36:33 +01:00
Kutalmis Bercin
41e264f27d ENH: New atmospheric boundary layer (ABL) model suite (Part 1)
Please refer to the header file documentation for complete set of details.

  ENH: add new fvOptions for ABL modelling

    - atmAmbientTurbSource
    - atmBuoyancyTurbSource
    - atmCoriolisUSource
    - atmLengthScaleTurbSource
    - atmPlantCanopyTurbSource
    - atmPlantCanopyUSource
    - atmPlantCanopyTSource
    - atmNutSource

  ENH: add new boundary conditions for ABL modelling
       with PatchFunction1 and TimeFunction1 support

    - atmAlphatkWallFunction
    - atmEpsilonWallFunction
    - atmNutkWallFunction
    - atmNutUWallFunction
    - atmNutWallFunction
    - atmOmegaWallFunction
    - atmTurbulentHeatFluxTemperature

  STYLE: change names of nutkAtmRoughWallFunction -> atmNutkWallFunction by
         ensuring the bitwise backward compatibility

  ENH: add new variable-scaling force computation method to actuationDiskSource

  ENH: review actuationDiskSource and radialActuationDiskSource

  ENH: add new function object, ObukhovLength

  ENH: add new ABL tutorials/verifications

    - verificationAndValidation/atmosphericModels/atmFlatTerrain
      - verification with the Leipzig field experiment
      - illustration of precursor/successor field mapping
    - verificationAndValidation/atmosphericModels/atmForestStability
      - verification with the Sweden field experiment
    - update incompressible/simpleFoam/turbineSiting
2020-06-09 11:08:14 +01:00
Kutalmis Bercin
a5c6516e23 DOC: elaborate the usage of function objects
ENH: update libs of etc/caseDicts/postProcess items
  ENH: ensure destructor=default
  ENH: ensure constness
  ENH: ensure no 'copy construct' and 'no copy assignment' exist
  TUT: add examples of function objects with full set
       of settings into a TUT if unavailable
  TUT: update pisoFoam/RAS/cavity tutorial in terms of usage
2020-06-08 15:43:47 +01:00
Mark Olesen
934d0bd743 ENH: support FOAM_MODULE_PREFIX to guide location of module builds (#1721)
- When compiling additional modules or user code, we need more control
  for the installation locations beyond the usual FOAM_USER_LIBBIN,
  FOAM_SITE_LIBBIN, FOAM_LIBBIN, and wish to have these values be
  modifiable without editing files.

- provide wmake rules for handling standard defaults:
    * GENERAL_RULES/module-path-user
    * GENERAL_RULES/module-path-group
    * GENERAL_RULES/module-path-project
  which are incorporated as follows:

  Make/options:
      include $(GENERAL_RULES)/module-path-user

  Make/files:
      LIB = $(FOAM_MODULE_LIBBIN)/libMyLibrary

  By default these would compile into FOAM_USER_{APPBIN,LIBBIN} but
  could be adjusted at compilation time. For example,

```
wmake -module-prefix=/path/my-install-location
```
Or
```
./Allwmake -module-prefix=/path/my-install-location
./Allwmake -prefix=/path/my-install-location
```
Or
```
FOAM_MODULE_PREFIX=/path/my-install-location ./Allwmake
```

ENH: add -no-recursion option for AllwmakeParseArguments

- more descriptive naming than the -fromWmake option (still supported)

- remove wmake/scripts/wmake.{cmake,wmake}-args since the -prefix
  handling and -no-recursion is now directly handled by AllwmakeParseArguments
2020-06-08 13:51:26 +02:00
Mark Olesen
8e0b05368f CONFIG: add gcc 10 series, reorder the compiler version list
- now list compiler versions in reverse order (newest first) similar
  to how they are listed on the gcc/llvm sites. Add comments to
  mention which compiler series are now considered unsupported.
2020-06-08 11:41:08 +02:00
Mark Olesen
ba8f1265e1 CONFIG: update boost, cgal, openmpi versions (#1705)
- the CGAL version change is associated with a header-only build
  (needs updated ThirdParty scripts).

- openmpi is a major version change (4.0.3)
2020-06-05 16:28:01 +02:00
mattijs
7618150ea4 ENH: fileModificationSkew: Changed default. See #1472 2020-06-05 09:06:14 +01:00
Mark Olesen
44ccf1e4d4 CONFIG: adjust aliases to use project-dir directly
- reduces some reliance on env variables
2020-06-03 12:11:17 +02:00
Mark Olesen
3e43edf056 ENH: unify use of dictionary method names
- previously introduced `getOrDefault` as a dictionary _get_ method,
  now complete the transition and use it everywhere instead of
  `lookupOrDefault`. This avoids mixed usage of the two methods that
  are identical in behaviour, makes for shorter names, and promotes
  the distinction between "lookup" access (ie, return a token stream,
  locate and return an entry) and "get" access (ie, the above with
  conversion to concrete types such as scalar, label etc).
2020-06-02 17:26:03 +02:00
Mark Olesen
997c9a232c STYLE: use compact form for libs () entries 2020-05-23 18:42:47 +02:00
Mark Olesen
09d9c5cc03 ENH: consistent autoPtr handling in PatchFunction1 2020-05-23 16:02:35 +02:00
Mark Olesen
36c1993c5e CONFIG: only set PV_PLUGIN_PATH if the directory actually exists
- this does mean two passes are required on the initial compilation,
  but improves reliability thereafter.

ENH: correct csh handling of system paraview
2020-05-22 21:53:42 +02:00
mattijs
7f936ad01f ENH: coded version of PatchFunction1. See #1709. 2020-05-20 10:38:39 +01:00
Mark Olesen
5bba554d6d GIT: renamed .keep files to .gitignore
- purpose is to preserve empty directories under git, so use the more
  general name
2020-05-18 15:18:20 +02:00
Mark Olesen
614db5a1e2 STYLE: adjust 'No completions' message for more clarification
- Now state "[ignore if OpenFOAM is not yet compiled]"
2020-05-14 11:20:49 +02:00
Mark Olesen
d4e31093fd ENH: improved encapsulation of MPI (re)builds
- dependency handling relocated from cmakeFunctions to wmakeFunctions
  and reused for mpi-versioned builds. This allows more checks for
  configuration parameters and removes hard-code build path
  information.

CONFIG: remove spurious mplibHPMPI entries

CONFIG: remove ADIOS1 rules (antiquated)
2020-05-12 10:05:47 +02:00
Mark Olesen
9e3d06853e ENH: add 'subcommand' handling to wmake (#1693)
- initial split of wmake-related commands into "plumbing" and
  "porcelain" akin to how git handles things.

- wmakeBuildInfo (very low-level), now relocated to the wmake/scripts
  and accessible for the user as "wmake -build-info".

  This satisfies a long-standing desire to access build information
  in a fashion similar to the api/patch information.

CONFIG: avoid git information when building with a debian/ directory

- when a 'debian/' directory exists, there is a high probability that
  the '.git/' directory is from debian and not from OpenFOAM (ie,
  useless here). This corresponds to an implicit '-no-git', which has
  no effect when building from pristine sources.

ENH: wmakeCheckPwd becomes scripts/wmake-check-dir

- accessible for the user as "wmake -check-dir" and with 1 or 2
  directory names. A wmakeCheckPwd symlink left for compatibility.
2020-05-12 10:05:24 +02:00
Mark Olesen
b3464d8afc COMP: wmake rules for AMD (clang-based) compiler (#1627)
- not fully tested
2020-05-06 13:11:09 +02:00
Mark Olesen
78dc8c6ba6 CONFIG: refactor common link rules, support FOAM_EXTRA_CFLAGS (#1256)
- additional cgal-headers-only rules (future use)

COMP: add -lgmp for CGAL with mpfr linkage
2020-05-06 13:10:30 +02:00
Mark Olesen
b4bf26ea4f Merge remote-tracking branch 'origin/master' into develop 2020-05-06 10:13:56 +02:00
Mark Olesen
aafe674f5f ENH: improve cmake/ParaView config handling
- improve handling of changes in ParaView/VTK or cmake parameters (#1693)

  * adjust internals to support recording of an unlimited number of
    configuration parameters and use file `cmp` instead of trying
    to check strings ourselves.

ENH: new wmake/scripts/wmake.cmake-args handler

- additional handling of -prefix=... as CMAKE_INSTALL_PREFIX export.

- in some contexts, can use instead of AllwmakeParseArguments
2020-05-05 18:06:09 +02:00
Mark Olesen
8525d4a2c5 CONFIG: no default verbosity for openfoam shell session
- an otherwise confusing amount of output that may not be expected
2020-04-27 21:24:56 +02:00
Mark Olesen
9cfa5fe454 Merge remote-tracking branch 'origin/master' into develop 2020-04-21 15:07:35 +02:00
Mark Olesen
aa2f932b75 CONFIG: additional packaging helpers, tutorial test helper
- bin/tools/create-mpi-config to query/write values for system openmpi.
  In some cases this can be used to avoid an mpicc requirement at runtime.

- adjust openfoam session to include -test-tutorial forwarding to the
  tutorials/AutoTest. This helps with writing installation tests.

- adjust foamConfigurePaths to latest version

- removal of gperftools default config, as per develop
2020-04-21 14:59:07 +02:00
Mark Olesen
e1586bdaa0 CONFIG: add linuxARM64Fujitsu settings (#1671) 2020-04-16 00:48:08 +02:00
Mark Olesen
f01ad2f187 CONFIG: improve config files for Darwin (#1667), BSD-csh syntax (#1668)
- use Clang instead of Gcc for Darwin since this is its system
  compiler. The user can force use of Gcc by using Gcc92 etc.

- make etc/cshrc sed check more robust.

- replace tcsh (${%var}) syntax with ("${var}" != "")

[Fixes and ideas from Alexey Matveichev]

CONFIG: do not source the gperftools environment by default

- this is now an used feature, but can be re-enabled by advanced users
  if required.
2020-04-08 11:38:18 +02:00
Mark Olesen
f644d78bde Merge remote-tracking branch 'origin/master' into develop 2020-04-06 12:38:57 +02:00
Mark Olesen
a5dbd27ddb CONFIG: update llvm versions 2020-03-25 13:21:11 +01:00
Andrew Heather
ba8d45c82d CONFIG: forces.cfg - updated output controls. See #1642 2020-03-18 18:21:32 +00:00
Mark Olesen
fe17c8ad5f CONFIG: improve prefix matching for system libraries (#1607)
- missed detection of system libraries when installed with multiarch
  paths like /usr/lib/x86_64-linux-gnu

CONFIG: improve handling of group/user config files (#928)

- changed bashrc handling of FOAM_CONFIG_NOUSER to use
  FOAM_CONFIG_MODE instead. Propagate into foamEtcFile to make this
  a stickier control.

  This change allows better control, but also enables cluster
  installations to define their own value within the OpenFOAM prefs.sh
  file to prevent users accidentally mis-configuring things if
  necessary.

- remove undocumented handling of an (a)ll mode in foamEtcFile to
  avoid potential pitfalls.

- add support for FOAM_CONFIG_ETC handling.
  This allows injection of an extra search layer when finding
  project etc files

ENH: improvements to foamConfigurePaths (#928)

- handle FOAM_CONFIG_ETC implicitly, or explicitly with the new
  -etc option.

STYLE: more explicit wording in foamConfigurePaths usage (#1602)

- document that an absolute path (eg, -scotch-path) overrides/ignores
  the equivalent ThirdParty setting (eg, -scotch)

- longer options -system-compiler and -third-compiler for -system
  and -third, respectively. Clearer as to their purpose.

- adjust the location sanity check to look for META-INFO directory.
2020-03-16 12:03:58 +01:00
Mark Olesen
ac8b64df46 CONFIG: support FOAM_EXTRA_CXXFLAGS (#1256)
- allows custom tuning of compilation parameters
2020-03-16 12:03:58 +01:00
Mark Olesen
ba3a31af95 ENH: openfoam shell session - improved and relocated
- '-c' option (as per shell), '-Dkey[=value]' option to provide
  preferences via the command-line. For example,

      etc/openfoam -DWM_COMPILER=Clang -int64  ./Allwmake -j -s -l

  These can also be combined with other options. Eg,

      etc/openfoam -DWM_COMPILER=Clang \
          -c 'wmake -show-path-cxx -show-cxxflags'

- relocated from bin/tools/ => etc/ for easier access

- bin/tools/openfoam.in : for autoconfig-style installation

- Auto-detect if the shell script was executed with openfoam and
  interpret accordingly.

  Simple example,

      --------------
      #!/usr/bin/openfoam
      cd "${0%/*}" || exit   # Run -*-sh-*- from this dir

      blockMesh
      simpleFoam
      --------------

   Note it is NOT currently possible to provide any other parameters
   this way. Eg,

      `#!/usr/bin/openfoam -sp` (NOT)

   This will either fail to run, or result in infinite recursion.
2020-03-16 12:03:57 +01:00
Mark Olesen
06c4dc34ee ENH: adjust sampling onto meshed surfaces (#1600)
- base level surface container is now a meshedSurface instead of
  a triSurface. This avoid automatic triangulation of surfaces
  when they are read, and simplifies the internals.

- sampling types:
  * "meshedSurface" (compat: "sampledTriSurfaceMesh")
  * "meshedSurfaceNormal" (compat: "sampledTriSurfaceMeshNormal")
2020-03-12 16:20:57 +01:00
Mark Olesen
5ba2cbc54f CONFIG: improve prefix matching for system libraries (#1607)
- missed detection of system libraries when installed with multiarch
  paths like /usr/lib/x86_64-linux-gnu

CONFIG: improve handling of group/user config files (#928)

- changed bashrc handling of FOAM_CONFIG_NOUSER to use
  FOAM_CONFIG_MODE instead. Propagate into foamEtcFile to make this
  a stickier control.

  This change allows better control, but also enables cluster
  installations to define their own value within the OpenFOAM prefs.sh
  file to prevent users accidentally mis-configuring things if
  necessary.

- remove undocumented handling of an (a)ll mode in foamEtcFile to
  avoid potential pitfalls.

- add support for FOAM_CONFIG_ETC handling.
  This allows injection of an extra search layer when finding
  project etc files

ENH: improvements to foamConfigurePaths (#928)

- handle FOAM_CONFIG_ETC implicitly, or explicitly with the new
  -etc option.

STYLE: more explicit wording in foamConfigurePaths usage (#1602)

- document that an absolute path (eg, -scotch-path) overrides/ignores
  the equivalent ThirdParty setting (eg, -scotch)

- longer options -system-compiler and -third-compiler for -system
  and -third, respectively. Clearer as to their purpose.

- adjust the location sanity check to look for META-INFO directory.
2020-02-24 16:00:16 +01:00
Mark Olesen
2892b78d72 CONFIG: support FOAM_EXTRA_CXXFLAGS (#1256)
- allows custom tuning of compilation parameters
2020-02-20 12:18:12 +01:00
mattijs
09db19c3f0 Merge remote-tracking branch 'origin/master' into develop 2020-02-12 17:13:34 +00:00
Mark Olesen
f90de02159 ENH: openfoam shell session - improved and relocated
- '-c' option (as per shell), '-Dkey[=value]' option to provide
  preferences via the command-line. For example,

      etc/openfoam -DWM_COMPILER=Clang -int64  ./Allwmake -j -s -l

  These can also be combined with other options. Eg,

      etc/openfoam -DWM_COMPILER=Clang \
          -c 'wmake -show-path-cxx -show-cxxflags'

- relocated from bin/tools/ => etc/ for easier access

- bin/tools/openfoam.in : for autoconfig-style installation

- Auto-detect if the shell script was executed with openfoam and
  interpret accordingly.

  Simple example,

      --------------
      #!/usr/bin/openfoam
      cd "${0%/*}" || exit   # Run -*-sh-*- from this dir

      blockMesh
      simpleFoam
      --------------

   Note it is NOT currently possible to provide any other parameters
   this way. Eg,

      `#!/usr/bin/openfoam -sp` (NOT)

   This will either fail to run, or result in infinite recursion.
2020-02-12 17:48:09 +01:00
Mark Olesen
92a148e9e5 CONFIG: provide separate default settings for clang/gcc (fixes #1566)
- the foamConfigurePaths script is quite simplistic and aggressive in
  what it changes. This was particularly evident when using it to
  change gcc/clang versions.

  Restructured the corresponding compiler settings to define default
  versions (eg, "default_gcc_version") that limits the scope of
  changes performed by foamConfigurePaths and makes it easier to
  understand if changing manually.
2020-02-06 12:36:26 +00:00
Mark Olesen
a100b49606 BUG: csh ignores additional parameters (fixes #1582) 2020-02-05 10:27:38 +01:00
Mark Olesen
81015889f2 CONFIG: provide separate default settings for clang/gcc (fixes #1566)
- the foamConfigurePaths script is quite simplistic and aggressive in
  what it changes. This was particularly evident when using it to
  change gcc/clang versions.

  Restructured the corresponding compiler settings to define default
  versions (eg, "default_gcc_version") that limits the scope of
  changes performed by foamConfigurePaths and makes it easier to
  understand if changing manually.
2020-02-03 11:05:04 +01:00
mattijs
0bc59af983 ENH: snappyHexMesh: allow cellZone erosion. Fixes #1528. 2020-02-03 09:29:10 +00:00
Mark Olesen
2a98c4e665 ENH: consistency improvements for surface patch handling (fixes #483)
- remove (unused) Istream constructors, prune some unused methods,
  rationalize write() vs writeDict().
  Deprecate inconsistent construction order.

- handle empty names for ".ftr" surface patches (for plain triSurface
  format) with double-quoted strings for more reliable streaming.
  Written on a single line.

  This is _backward_ compatible, but if users have been parsing these
  files manually, they will need to adjust their code.

Previously:
```
  (
  frt-fairing:001%1
  empty

  windshield:002%2
  empty
  ...
  )
```

Updated (with example handling of empty name):
```
  (
  frt-fairing:001%1 empty

  windshield:002%2 ""
  ...
  )
```
2020-01-16 10:07:26 +01:00