Commit Graph

586 Commits

Author SHA1 Message Date
Andrew Heather
ae2ab06312 REL: Release preparations 2019-12-23 09:49:23 +00:00
Kutalmis Bercin
f9e5392171 BUG: fix tut regression for potentialFoam (#1518) 2019-12-12 11:22:13 +00:00
Andrew Heather
e1a7c0ed1d ENH: Particle PatchPostProcessing - enable users to filter particle property output
The optional 'fields' entry can be used to limit which particle fields are
written to file.  If empty/not specified, all properties are written to
maintain backwards compatibility.

    patchPostProcessing1
    {
        type            patchPostProcessing;
        maxStoredParcels 20;
        fields          (position "U.*" d T nParticle);
        patches
        (
            cycLeft_half0
            cycLeft_half1
        );
    }
2019-12-09 23:31:01 +00:00
Andrew Heather
deeb27896c ENH: Added option to write particle patch interactions to file
File writing is off by default; to activate, add to the patch interaction model
coeff dictionary

    writeToFile yes;
2019-12-09 22:31:09 +00:00
Mark Olesen
98467036b3 STYLE: regularize quoting and exit on failed 'cd' 2019-11-13 13:19:16 +01:00
Mark Olesen
46d7db79aa TUT: consistent calling of m4 2019-11-06 11:50:42 +01:00
Mark Olesen
e6dfb39c66 STYLE: remove unnecessary stdout, stderr /dev/null redirects
- no stderr redirect needed:
    * 'command -v'

- no stdout/stderr redirect needed:
    * 'rm -f'

STYLE: consistent spacing after redirects
2019-11-06 10:44:36 +01:00
Mark Olesen
ec7e3c88e4 ENH: test for WM_PROJECT_DIR being set/unset in scripts 2019-11-06 09:18:51 +01:00
Mark Olesen
fc461a1cc6 TUT: use writeControl "adjustable" (alias for "adjustableRunTime") 2019-09-27 15:50:06 +02:00
OpenFOAM bot
880d81475b TUT: use simpler syntax for libs entries 2019-08-30 16:45:45 +02:00
Andrew Heather
be44dcaf1f RELEASE: Version clean-up for release 2019-06-25 11:51:19 +01:00
Andrew Heather
74ec94281e TUT: Tuorial updates 2019-06-21 10:53:13 +01:00
sergio
aaf5d7be6d Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2019-06-04 11:06:35 -07:00
sergio
d44a72a1dd ENH: Moving reactingHeterogenousParcelFoam tut 2019-05-13 13:13:18 -07:00
Mark Olesen
722ebdb151 STYLE: update of 'mode' to 'type' keyword for radiation properties 2019-05-17 09:53:25 +01:00
sergio
25575df60e ENH: new ReactingHeterogeneousCloud
- number of particles per parcel info to kinematic cloud

- added turbulent dispersion to basicHeterogeneousReactingParcel

- corrected dhsTrans in MUCSheterogeneousRate::calculate

- added cloud macro system to reactingParcelFoam and fixed calculation
  of average particles per parcel

- added progress variable dimension to reacting model (nF)

- added ReactingHeterogeneous tutorial
2019-01-04 17:08:53 -08:00
Mark Olesen
42fbf6d38c ENH: extended runTimePostProcessing (#1206)
- Extended runTimePostProcessing to include access to "live"
  simulation objects such a geometry patches and sampled surfaces
  stored on the "functionObjectObjects" registry.

- Add 'live' runTimePostProcessing of cloud data.
  Extracts position and fields from the cloud via its objectRegistry writer

- For the "live" simulation objects, there are two new volume filters
  that work directly with the OpenFOAM volume fields:
      * iso-surface
      * cutting planes
  Both use the VTK algorithms directly and support multiple values.
  Eg, can make multiple iso-levels or multiple planes parallel to each
  other.

- When VTK has been compiled with MPI-support, parallel rendering will
  be used.

- Additional title text properties (shadow, italic etc)

- Simplified handling of scalar-bar and visibility switches

- Support multiple text positions. Eg, for adding watermark text.
2019-02-13 11:22:46 +01:00
Andrew Heather
9231534efa STYLE: Updating version to v1812 2018-12-19 18:07:52 +00:00
Mark Olesen
9103b199b9 TUT: remove unused default decomposition coeffs settings 2018-12-13 14:04:50 +01:00
sergio
aaa041b3c7 Fixing reconstruction of lagragian fields for hopper 2018-12-11 13:53:54 -08:00
Mark Olesen
08bcee7a3f ENH: support 'use' action for selections in vtkWrite, ensightWrite (#926)
- have 'use' as the action appears more intuitive as the first entry
  instead of 'add'. Was previously also added to vtkCloud.
2018-12-08 22:16:58 +01:00
Mark Olesen
ff18ab58c2 ENH: add 'use' action for parcel selection
- shortcut for "clear" + "add".

  At the end of the operation, only parcels matching that particular
  selection source will be used.
2018-11-24 13:34:02 +01:00
Mark Olesen
58dae2de43 ENH: improvements for dataCloud function object (issue #1044)
- now supports a parcel selection mechanism like vtkCloud,
  giving the ability to select a subset of parcels.
  For example, a given stride, or removal of parcels with a small
  diameter.

  Eg,
      dataCloud output Time: 3.2
      Applying parcel filtering to 994 parcels
      - add stride 4
      - subtract field U : (less 0.2)
      After filtering using 214/994 parcels

- add output precision control for dataCloud
2018-11-24 13:14:57 +01:00
Mark Olesen
0f48b89185 ENH: output filtering of vtkCloud by user selection (#1056)
- can filter by stride or field information.
  For example,

      selection
      {
          stride
          {
              // every 10th parcelId
              action  add;
              source  stride;
              stride  10;
          }
          Umin
          {
              // Remove slow parcels
              action  subtract;
              source  field;
              field   U;
              accept  (less 1e-3);
          }
          diam
          {
              // Only particular diameter ranges
              action  subset;
              source  field;
              field   d;
              accept  (greater 1e-3) and (less 1e-3);
          }
      }
2018-11-13 22:57:49 +01:00
Mark Olesen
03eec4a5db ENH: code improvements for vtkCloud function object (issue #926)
- use parallel list writing, beginDataArray methods.

- use static_assert to restrict conversion of non-label integral types

- cache .vtp.series information by fileName instead of by cloud name.
  This issues if the output directory changes, and simplifies code.

ENH: emit TimeValue in files generated by vtkCloud

- additional information for passing to ParaView

ENH: vtkCloud output to postProcessing/ (issue #866)

- better alignment with other function objects, no collision with
  foamToVTK output.
2018-09-17 09:36:00 +02:00
Mark Olesen
90dd4b30cd TUT: syntax typo (#1059) 2018-11-12 13:59:38 +01:00
Mark Olesen
5f556ffb4a ENH: make sourceInfo sub-dictionary optional for topoSet (#1060)
- helps reduce clutter in the topoSetDict files.

  Caveats when using this.

  The older specification styles using "name" will conflict with the
  set name. Eg,

    {
        name    f0
        type    faceSet;
        action  add;
        source  patchToFace;
        sourceInfo
        {
            name   inlet;
        }
    }

    would flattened to the following
    {
        name    f0
        type    faceSet;
        action  add;
        source  patchToFace;
        name   inlet;
    }
    which overwrites the "name" used for the faceSet.

    The solution is to use the updated syntax:

    {
        name    f0
        type    faceSet;
        action  add;
        source  patchToFace;
        patch   inlet;
    }
2018-11-07 10:33:36 +01:00
Mark Olesen
7325e3ac7d ENH: topoSetSource::SUBTRACT enum action (#1060)
- old 'DELETE' enum was easily confused with 'REMOVE', which removes
  the set, not the elements from the set.

- provide corresponding subtractSet() method

STYLE: HashSet set/unset instead of insert/erase methods in topoSetSource

- simplifies switching to/from bitSet storage
2018-10-30 15:09:44 +00:00
Mark Olesen
9a87a043d6 ENH: consistency updates for patchToFace topoSetSource (#1060)
- Support specification with "patches" and "patch" keywords
  (similar to zone selection). Keyword "name" for compatibility.
2018-10-30 12:01:36 +00:00
Mark Olesen
50fe195374 ENH: use "origin" for searchable sphere etc. (#1060)
- replaces "centre", using the same keyword as other objects
  (eg, plane, rotatedBox, coordinateSystem etc).
2018-10-29 15:51:05 +00:00
Mark Olesen
14a39405c2 ENH: simple dataCloud function object (issue #1044)
- writes positions and a single field (eg, diameter) in plain ASCII files,
  suitable for importing in a spreadsheet or manipulation with
  scripting tools.

- code integrated from
  https://develop.openfoam.com/Community/OpenFOAM-addOns
2018-10-17 17:37:23 +02:00
Andrew Heather
1eba709319 ENH: Added new fieldExtents function object
Description
    Calculates the spatial minimum and maximum extents of a field

    The extents are derived from the bound box limits after identifying
    the locations where field values exceed the user-supplied threshold
    value.

Usage
    Example of function object specification:

    fieldExtents1
    {
        type        fieldExtents;
        libs        ("libfieldFunctionObjects.so");
        ...
        writeToFile yes;
        log         yes;
        fields      (alpha);
        threshold   0.5;
        patches     ();
    }

    Where the entries comprise:

        Property      | Description              | Required   | Default
        type          | type name: fieldExtents  | yes        |
        writeToFile   | write extents data to file | no       | yes
        log           | write extents data to standard output | no | yes
        internalField | Process the internal field | no       | yes
        threshold     | Field value to identify extents boundary | yes |
        referencePosition | Reference position   | no         | (0 0 0)
        fields        | list of fields to process | yes       |
        patches       | list of patches to process | no       | <all>

    Output data is written to the file \<timeDir\>/fieldExtents.dat

Note
    For non-scalar fields, the magnitude of the field is employed and
    compared to the threshold value.
2018-10-16 13:01:15 +01:00
Mark Olesen
6697bb4735 ENH: improve, simplify, rationalize coordinate system handling (issue #863)
Previously the coordinate system functionality was split between
coordinateSystem and coordinateRotation. The coordinateRotation stored
the rotation tensor and handled all tensor transformations.

The functionality has now been revised and consolidated into the
coordinateSystem classes. The sole purpose of coordinateRotation
is now just to provide a selectable mechanism of how to define the
rotation tensor (eg, axis-angle, euler angles, local axes) for user
input, but after providing the appropriate rotation tensor it has
no further influence on the transformations.

--

The coordinateSystem class now contains an origin and a base rotation
tensor directly and various transformation methods.

  - The origin represents the "shift" for a local coordinate system.

  - The base rotation tensor represents the "tilt" or orientation
    of the local coordinate system in general (eg, for mapping
    positions), but may require position-dependent tensors when
    transforming vectors and tensors.

For some coordinate systems (currently the cylindrical coordinate system),
the rotation tensor required for rotating a vector or tensor is
position-dependent.

The new coordinateSystem and its derivates (cartesian, cylindrical,
indirect) now provide a uniform() method to define if the rotation
tensor is position dependent/independent.

The coordinateSystem transform and invTransform methods are now
available in two-parameter forms for obtaining position-dependent
rotation tensors. Eg,

      ... = cs.transform(globalPt, someVector);

In some cases it can be useful to use query uniform() to avoid
storage of redundant values.

      if (cs.uniform())
      {
          vector xx = cs.transform(someVector);
      }
      else
      {
          List<vector> xx = cs.transform(manyPoints, someVector);
      }

Support transform/invTransform for common data types:
   (scalar, vector, sphericalTensor, symmTensor, tensor).

====================
  Breaking Changes
====================

- These changes to coordinate systems and rotations may represent
  a breaking change for existing user coding.

- Relocating the rotation tensor into coordinateSystem itself means
  that the coordinate system 'R()' method now returns the rotation
  directly instead of the coordinateRotation. The method name 'R()'
  was chosen for consistency with other low-level entities (eg,
  quaternion).

  The following changes will be needed in coding:

      Old:  tensor rot = cs.R().R();
      New:  tensor rot = cs.R();

      Old:  cs.R().transform(...);
      New:  cs.transform(...);

  Accessing the runTime selectable coordinateRotation
  has moved to the rotation() method:

      Old:  Info<< "Rotation input: " << cs.R() << nl;
      New:  Info<< "Rotation input: " << cs.rotation() << nl;

- Naming consistency changes may also cause code to break.

      Old:  transformVector()
      New:  transformPrincipal()

  The old method name transformTensor() now simply becomes transform().

====================
  New methods
====================

For operations requiring caching of the coordinate rotations, the
'R()' method can be used with multiple input points:

       tensorField rots(cs.R(somePoints));

   and later

       Foam::transformList(rots, someVectors);

The rotation() method can also be used to change the rotation tensor
via a new coordinateRotation definition (issue #879).

The new methods transformPoint/invTransformPoint provide
transformations with an origin offset using Cartesian for both local
and global points. These can be used to determine the local position
based on the origin/rotation without interpreting it as a r-theta-z
value, for example.

================
  Input format
================

- Streamline dictionary input requirements

  * The default type is cartesian.
  * The default rotation type is the commonly used axes rotation
    specification (with e1/e2/3), which is assumed if the 'rotation'
    sub-dictionary does not exist.

    Example,

    Compact specification:

        coordinateSystem
        {
            origin  (0 0 0);
            e2      (0 1 0);
            e3      (0.5 0 0.866025);
        }

    Full specification (also accepts the longer 'coordinateRotation'
    sub-dictionary name):

        coordinateSystem
        {
            type    cartesian;
            origin  (0 0 0);

            rotation
            {
                type    axes;
                e2      (0 1 0);
                e3      (0.5 0 0.866025);
            }
        }

   This simplifies the input for many cases.

- Additional rotation specification 'none' (an identity rotation):

      coordinateSystem
      {
          origin  (0 0 0);
          rotation { type none; }
      }

- Additional rotation specification 'axisAngle', which is similar
  to the -rotate-angle option for transforming points (issue #660).
  For some cases this can be more intuitive.

  For example,

      rotation
      {
          type    axisAngle;
          axis    (0 1 0);
          angle   30;
      }
  vs.
      rotation
      {
          type    axes;
          e2      (0 1 0);
          e3      (0.5 0 0.866025);
      }

- shorter names (or older longer names) for the coordinate rotation
  specification.

     euler         EulerRotation
     starcd        STARCDRotation
     axes          axesRotation

================
  Coding Style
================
- use Foam::coordSystem namespace for categories of coordinate systems
  (cartesian, cylindrical, indirect). This reduces potential name
  clashes and makes a clearer declaration. Eg,

      coordSystem::cartesian csys_;

  The older names (eg, cartesianCS, etc) remain available via typedefs.

- added coordinateRotations namespace for better organization and
  reduce potential name clashes.
2018-10-01 13:54:10 +02:00
Mark Olesen
b41d5ed523 STYLE: remove deprecated constraints format from tutorials 2018-07-11 17:02:40 +02:00
Mark Olesen
712f49758a TUT: update snappy dictionaries to use minMedialAxisAngle
- canonical parameter name changed from "minMedianAxisAngle" to
  "minMedialAxisAngle" (DEC-2013), but was never previously reported
  as having changed.
2018-07-18 16:47:34 +02:00
Mark Olesen
84784c5061 Merge remote-tracking branch 'origin/master' into develop 2018-07-13 13:25:11 +02:00
Mark Olesen
1b76ff6001 BUG: vtkCloud suppresses output for empty clouds (closes #866)
- the original intention was to avoid vtp output when the clouds are
  empty anyhow. However, it is useful for post-processing to have
  clouds with zero parcels (eg, before the start of injection).

  Pruning of empty clouds is now an option in the vtkCloud dictionary
  controls, with the default being false (no pruning). This represents
  a non-breaking change in behaviour since it generates more output
  than previously.

  Example,
  {
      type    vtkCloud;
      //- Suppress writing of empty clouds (default: false)
      prune   true;
  }
2018-07-11 07:53:51 +02:00
Mark Olesen
d530bc254a STYLE: code cleanup searchableSurface (issue #929)
- improve doxygen entries for searchable surfaces.

- support selection of searchable surfaces with shorter names.
  Eg,
      type   box | cylinder | ...;
  vs  type   searchableBox | searchableCylinder | ...;
2018-07-06 11:03:28 +02:00
Andrew Heather
6e35bcda70 ENH: Updated config for release v1806 2018-06-28 12:56:00 +01:00
Andrew Heather
16a6379183 TUT: Cleaned up headers 2018-06-26 17:37:38 +01:00
Mark Olesen
30b4eda7a4 TUT: update some old keywords found in tutorials
- functionObjectLibs -> libs
- redirectType -> name
- change deprecated writeCompression flags types to Switch.

- cleanup some trailing ';;' from some dictionaries
2018-06-26 14:18:52 +02:00
Mark Olesen
73fbed1c2c TUT: consistent use of scale and headers for blockMeshDict 2018-06-21 15:28:25 +02:00
Mark Olesen
27dcb69ccc GIT: add forgotten Allrun-parallel script (issue #866) 2018-06-19 13:03:35 +02:00
Mark Olesen
6a13ad2d93 ENH: vtkCloud function object (issue #866)
- writes lagrangian data in VTP format during a simulation.
  In parallel, all data are written from the master.
2018-06-16 01:16:00 +02:00
Andrew Heather
357042c801 TUT: Updates for combustionModel = none. See #867 2018-06-14 14:45:32 +01:00
Andrew Heather
c909a5df25 GIT: resolved merge conflict 2018-06-13 14:20:18 +01:00
Andrew Heather
616b91c06e Merge branch 'master' into develop 2018-06-13 14:17:47 +01:00
Andrew Heather
85ecb009d7 TUT: Updated input value 2018-05-18 09:57:12 +01:00
Andrew Heather
66df3369dc BUG: ConeInjection - corrected number of parcels injected for multiple injector positions 2018-05-17 09:04:00 +01:00
sergio
6b33d0ec6b Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2017-12-18 08:24:58 -08:00