Commit Graph

307 Commits

Author SHA1 Message Date
Mark Olesen
886ba89ddb ENH: change internal dictionary separator to '/' (#1073)
- simplifies internal handling (like a fileName) and allows the
  dictionary name to be used with unambiguous addressing.
  The previous dot (.) separator is ambiguous (ie, as dictionary
  separator or as part of a keyword).

ENH: foamDictionary report -add/-set to stderr
2023-08-21 08:40:39 +02:00
Mark Olesen
db16d80840 ENH: use objectRegistry/IOobjectList sorted instead of lookupClass
- in most cases a parallel-consistent order is required.
  Even when the order is not important, it will generally require
  fewer allocations to create a UPtrList of entries instead of a
  HashTable or even a wordList.
2023-07-31 20:11:32 +02:00
Mark Olesen
945e3e41b1 ENH: more consistent use of good() or direct testing instead valid() 2023-07-27 16:52:03 +02:00
Mark Olesen
4412566c58 ENH: support command-line specification of MPI threads (#2791)
- MPI_THREAD_MULTIPLE is usually undesirable for performance reasons,
  but in some cases may be necessary if a linked library expects it.
  Provide a '-mpi-threads' option to explicitly request it.

ENH: consolidate some looping logic within argList
2023-06-19 17:05:45 +02:00
Mark Olesen
f41d1879b9 STYLE: prefer isHeaderClass<Type>() check instead of Type::typeName
- use typeHeaderOk<regIOobject>(false) for some generic file existence
  checks. Often had something like labelIOField as a placeholder, but
  that may be construed to have a particular something.
2023-05-19 00:48:14 +02:00
Mark Olesen
16591012e9 ENH: add -verbose option to surface conversion, cleanup
- by default, reduce the amount of output

ENH: support default text description for -verbose option

- simplifies use in more places.
2023-05-09 19:30:57 +02:00
Mark Olesen
475ed5cc32 STYLE: readOnProc/writeOnProc instead of 'valid' for IO 2023-04-04 15:04:26 +02:00
Mark Olesen
25bc7d65f7 STYLE: prefer REGISTER/NO_REGISTER instead of true/false for IOobject
- self-documenting
2023-03-10 14:16:32 +00:00
Mark Olesen
d597b3f959 STYLE: check iterator validity with good() instead of found()
- aligns better with other container checks
2023-02-10 17:12:48 +01:00
Mark Olesen
a8f369fd2b ENH: region support for foamRestoreFields (#2638) 2022-11-22 13:14:53 +01:00
Mark Olesen
473e14418a ENH: more consistent use of broadcast, combineReduce etc.
- broadcast           : (replaces scatter)
  - combineReduce       == combineGather + broadcast
  - listCombineReduce   == listCombineGather + broadcast
  - mapCombineReduce    == mapCombineGather + broadcast
  - allGatherList       == gatherList + scatterList

  Before settling on a more consistent naming convention,
  some intermediate namings were used in OpenFOAM-v2206:

    - combineReduce       (2206: combineAllGather)
    - listCombineReduce   (2206: listCombineAllGather)
    - mapCombineReduce    (2206: mapCombineAllGather)
2022-11-08 16:48:08 +00:00
Mark Olesen
779a2ca084 ENH: adjust fileName methods for similarity to std::filesystem::path
- stem(), replace_name(), replace_ext(), remove_ext() etc

- string::contains() method - similar to C++23 method

  Eg,
      if (keyword.contains('/')) ...
  vs
      if (keyword.find('/') != std::string::npos) ...
2022-10-11 17:58:22 +02:00
Mark Olesen
88061f3b28 ENH: improved argList handling of libs, functionObjects
- include -no-libs option by default, similar to '-lib',
  which makes it available to all solvers/utilities.
  Add argList allowLibs() method to query it.

- relocate with/no functionObjects logic from Time to argList
  itself as argList allowFunctionObjects()

- add libs/functionObjects override handling to decomposePar etc

ENH: report the stream relativeName for IOerrors (see c9333a5ac8)
2022-09-22 16:08:52 +02:00
Mark Olesen
ac83b41aaf ENH: improve demangled symbol names for safePrintStack
- parse out symbols and use abi::__cxa_demangle for more readable
  names in safePrintStack.

- shorten prefixed /path/openfoam/platforms/lib/... to start
  with "platforms/lib/..." to avoid unreadably long lines.

- improved file-scope localization of helper functions.

STYLE: use std::ios_base::basefield instead of dec|oct|hex for masking
2022-07-21 11:29:49 +02:00
Mark Olesen
3d892ace29 STYLE: set readOpt(..), writeOpt(..) by parameter, not by assignment
STYLE: qualify format/version/compression with IOstreamOption not IOstream

STYLE: reduce number of lookups when scanning {fa,fv}Solution

STYLE: call IOobject::writeEndDivider as static
2022-07-19 11:17:47 +02:00
sergio
9a80d0d5ef ENH: thermoTools: new library for thermophysics tools
thermoTools is a relocation of various existing tools:

- src/TurbulenceModels/compressible/turbulentFluidThermoModels/derivedFvPatchFields/
- src/semiPermeableBaffle/derivedFvPatchFields/
- src/thermophysicalModels/thermophysicalPropertiesFvPatchFields/liquidProperties/

ENH: Allwmake: reordering various compilation steps

Co-authored-by: Kutalmis Bercin <kutalmis.bercin@esi-group.com>
2022-06-21 09:29:13 +01:00
Mark Olesen
ba10afea77 ENH: add 'filtered' polyMesh regionName() method
- in various situations with mesh regions it is also useful to
  filter out or remove the defaultRegion name (ie, "region0").

  Can now do that conveniently from the polyMesh itself or as a static
  function. Simply use this

      const word& regionDir = polyMesh::regionName(regionName);

  OR  mesh.regionName()

  instead of

      const word& regionDir =
      (
           regionName != polyMesh::defaultRegion
         ? regionName
         : word::null
      );

  Additionally, since the string '/' join operator filters out empty
  strings, the following will work correctly:

      (polyMesh::regionName(regionName)/polyMesh::meshSubDir)

      (mesh.regionName()/polyMesh::meshSubDir)
2022-05-27 14:10:31 +02:00
Mark Olesen
18e0d7e4d6 ENH: bundle broadcasts (#2371)
- additional Pstream::broadcasts() method to serialize/deserialize
  multiple items.

- revoke the broadcast specialisations for std::string and List(s) and
  use a generic broadcasting template. In most cases, the previous
  specialisations would have required two broadcasts:
    (1) for the size
    (2) for the contiguous content.

  Now favour reduced communication over potential local (intermediate)
  storage that would have only benefited a few select cases.

ENH: refine PstreamBuffers access methods

- replace 'bool hasRecvData(label)' with 'label recvDataCount(label)'
  to recover the number of unconsumed receive bytes from specified
  processor.  Can use 'labelList recvDataCounts()' to recover the
  number of unconsumed receive bytes from all processor.

- additional peekRecvData() method (for transcribing contiguous data)

ENH: globalIndex whichProcID - check for isLocal first

- reasonable to assume that local items are searched for more
  frequently, so do preliminary check for isLocal before performing
  a more costly binary search of globalIndex offsets

ENH: masterUncollatedFileOperation - bundled scatter of status
2022-04-29 11:44:28 +02:00
Mark Olesen
d38de84d21 ENH: bundle Pstream:: AllGather methods
- bundles frequently used 'gather/scatter' patterns more consistently.

  - combineAllGather     -> combineGather + broadcast
  - listCombineAllGather -> listCombineGather + broadcast
  - mapCombineAllGather  -> mapCombineGather + broadcast
  - allGatherList        -> gatherList + scatterList
  - reduce               -> gather + broadcast (ie, allreduce)

- The allGatherList currently wraps gatherList/scatterList, but may be
  replaced with a different algorithm in the future.

STYLE: PstreamCombineReduceOps.H is mostly unneeded now
2022-03-31 15:56:04 +02:00
Mark Olesen
5a121119e6 ENH: add -verbose support into argList
- similar to -dry-run handling, can be interrogated from argList,
  which makes it simpler to add into utilities.

- support multiple uses of -dry-run and -verbose to increase the
  level. For example, could have

    someApplication -verbose -verbose

 and inside of the application:

    if (args.verbose() > 2) ...

BUG: error with empty distributed roots specification (fixes #2196)

- previously used the size of distributed roots to transmit if the
  case was running in distributed mode, but this behaves rather poorly
  with bad input. Specifically, the following questionable setup:

      distributed true;
      roots ( /*none*/ );

  Now transmit the ParRunControl distributed() value instead,
  and also emit a gentle warning for the user:

      WARNING: running distributed but did not specify roots!
2021-11-09 15:44:54 +01:00
Mark Olesen
ba8d6bddcc ENH: use singleton method for accessing runtime selection
STYLE: use alias to mark partialFaceAreaWeightAMI deprecation after v2012
2021-11-05 17:21:27 +01:00
Mark Olesen
b364a9e72c ENH: argList improvements
- argList::envExecutable() static method.
  This is identical to getEnv("FOAM_EXECUTABLE"), where the name of
  the executable has typically been set from the argList construction.

  Provides a singleton access to this value from locations that
  do not have knowledge of the originating command args (argList).
  This is a similar rationale as for the argList::envGlobalPath() static.

- additional argList::envRelativePath() static method.

- make -dry-run handling more central and easier to use by adding into
  argList itself.

STYLE: drop handling of -srcDoc (v1706 option)

- replaced with -doc-source for 1712 and never used much anyhow
2021-11-03 11:38:21 +01:00
Mark Olesen
851be8ea33 ENH: use consistent naming when toggling exception throwing on/off 2021-11-02 21:14:41 +01:00
Mark Olesen
0c15f773e0 STYLE: remove/replace unneeded SortableList 2021-07-15 16:47:27 +02:00
Mark Olesen
385f92732b STYLE: default construct empty dictionaries
- some code used copy construct from dictionary::null instead.
  The result is the same but suggests that something else may be intended.
  Only need dictionary::null for const-ref usage.
2021-04-26 17:09:38 +02:00
Mark Olesen
b060378dca ENH: improve consistency of fileName handling windows/non-windows (#2057)
- wrap command-line retrieval of fileName with an implicit validate.

  Instead of this:
      fileName input(args[1]);
      fileName other(args["someopt"]);

  Now use this:
      auto input = args.get<fileName>(1);
      auto other = args.get<fileName>("someopt");

  which adds a fileName::validate on the inputs

  Because of how it is implemented, it will automatically also apply
  to argList getOrDefault<fileName>, readIfPresent<fileName> etc.

- adjust fileName::validate and clean to handle backslash conversion.
  This makes it easier to ensure that path names arising from MS-Windows
  are consistently handled internally.

- dictionarySearch: now check for initial '/' directly instead of
  relying on fileName isAbsolute(), which now does more things

BREAKING: remove fileName::clean() const method

- relying on const/non-const to control the behaviour (inplace change
  or return a copy) is too fragile and the const version was
  almost never used.

  Replace:
      fileName sanitized = constPath.clean();

  With:
      fileName sanitized(constPath);
      sanitized.clean());

STYLE: test empty() instead of comparing with fileName::null
2021-04-19 16:33:42 +00:00
Mark Olesen
9a2a22a03a ENH: provide setter methods for IOobject read/write options etc.
- simplifies local toggling.

- centralize fileModification static variables into IOobject.
  They were previously scattered between IOobject and regIOobject
2021-03-17 15:10:00 +01:00
Mark Olesen
df74e8448c ENH: robuster fileOperations splitProcessorPath
- robuster matching behaviour when encountering paths that themselves
  contain the word "processor" in them. For example,

    "/path/processor0generation2/case1/processor10/system"
    will now correctly match on processor10 instead of failing.

- use procRangeType for encapsulating the processor ranges

- provision for information of distributed vs non-distributed roots.
  The information is currently available from the initial setup, but
  can useful to access directly within fileOperation.

STYLE: modernize list iteration
2020-12-08 11:58:28 +01:00
Mark Olesen
9423d2bd83 CONFIG: improve support for compiler/link options (#1830)
- introduce WM_COMPILE_CONTROL variable to convey control information
  into the build rules.

  The convention (as per spack):
      - '+' to select a feature
      - '~' to deselect a feature

  Eg, to select the gold linker, and disable openmp
  (spaces are not required):

      WM_COMPILE_CONTROL="+gold ~openmp"

CONFIG: accept FOAM_EXTRA_LDFLAGS for AMD, gold, Mingw linkers

CONFIG: generalize PROJECT_LIBS (-ldl used almost universally)
2020-09-07 09:45:51 +02:00
Mark Olesen
12c91b9472 STYLE: check autoPtr as plain bool instead of valid()
- cleaner code, more similarity with unique_ptr

  Now
      if (ptr)
      if (!ptr)

  instead
      if (ptr.valid())
      if (!ptr.valid())
2020-07-16 11:39:24 +02:00
Mark Olesen
8526e44884 ENH: dlLibraryTable InfoProxy output (#1735) 2020-06-22 10:22:45 +02:00
Mark Olesen
2dcbc09b3e ENH: add foamHasLibrary to test for availability of libraries (#1735)
- For some cases it can be helpful to test if additional libraries can
  be properly resolved.

  This can be useful in scripts to test for additional capability:

      if foamHasLibrary geometricVoF
      then ...
      fi

  But also directly from the command-line to help resolve configuration
  issues:

      foamHasLibrary -verbose petscFoam

  Could not load "petscFoam"
  libpetsc.so.3.13: cannot open shared object file: No such file or directory
2020-06-19 12:52:00 +02:00
Mark Olesen
31b172217c ENH: support predicate checks for argList (similar to dictionary methods)
- Favour use of argList methods that are more similar to dictionary
  method names with the aim of reducing the cognitive load.

  * Silently deprecate two-parameter get() method in favour of the
    more familiar getOrDefault.
  * Silently deprecate opt() method in favour of get()

  These may be verbosely deprecated in future versions.
2020-06-02 13:51:18 +02:00
Mark Olesen
02517e971a ENH: no implicit loading of controlDict libs for foamListRegions (#1713)
ENH: eliminate duplicate input region types
2020-05-23 15:53:17 +02:00
Mark Olesen
6744a2102b Merge remote-tracking branch 'origin/master' into develop 2020-03-12 11:35:26 +01:00
Mark Olesen
42299dca22 ENH: use IOstreamOption for writeObject() calls.
- reduces the number of parameters that are being passed around
  and allows future additions into the IOstreamOption with mininal
  effort.
2020-02-19 09:25:33 +00:00
Mark Olesen
79cf72d573 BUG: foamListTimes does not remove collated directories (fixes #1588)
- also now report any verbosity on stderr

- fix similar collated directories issue for foamRestoreFields
2020-02-14 17:44:49 +01:00
mattijs
8ab37e13e2 ENH: foamFormatConvert: leave boundary intact. Fixes #1358. 2020-02-12 15:04:05 +00:00
mattijs
427f92215c BUG: foamFormatConvert: missing 'faces' file. Fixes #1529. 2019-12-18 15:00:50 +00:00
Mark Olesen
98467036b3 STYLE: regularize quoting and exit on failed 'cd' 2019-11-13 13:19:16 +01:00
Mark Olesen
7c1190f0b1 ENH: rationalize some string methods.
- silently deprecate 'startsWith', 'endsWith' methods
  (added in 2016: 2b14360662), in favour of
  'starts_with', 'ends_with' methods, corresponding to C++20 and
  allowing us to cull then in a few years.

- handle single character versions of starts_with, ends_with.

- add single character version of removeEnd and silently deprecate
  removeTrailing which did the same thing.

- drop the const versions of removeRepeated, removeTrailing.
  Unused and with potential confusion.

STYLE: use shrink_to_fit(), erase()
2019-11-11 18:50:00 +01:00
Mark Olesen
e6dfb39c66 STYLE: remove unnecessary stdout, stderr /dev/null redirects
- no stderr redirect needed:
    * 'command -v'

- no stdout/stderr redirect needed:
    * 'rm -f'

STYLE: consistent spacing after redirects
2019-11-06 10:44:36 +01:00
Mark Olesen
ec7e3c88e4 ENH: test for WM_PROJECT_DIR being set/unset in scripts 2019-11-06 09:18:51 +01:00
Andrew Heather
fdf8d10ab4 Merge commit 'e9219558d7' into develop-v1906 2019-12-05 11:47:19 +00:00
OpenFOAM bot
e9219558d7 GIT: Header file updates 2019-10-31 14:48:44 +00:00
Mark Olesen
b6bf9129f6 DEFEATURE: pointer dereferencing for HashTable iterator
- this largely reverts 3f0f218d88 and 4ee65d12c4.

  Consistent addressing with support for wrapped pointer types (eg,
  autoPtr, std::unique_ptr) has proven to be less robust than desired.
  Thus rescind HashTable iterator '->' dereferencing (from APR-2019).
2019-09-27 19:45:54 +02:00
sergio
e3b05494f7 COMP: relocate regionProperties to meshTools 2019-09-20 14:06:30 -07:00
Kutalmis Bercin
5447220e6f BUG: Add writeDivider to foamDictionary (#1444) 2019-09-23 14:14:48 +01:00
Mark Olesen
f94be1bebb ENH: use FatalIOErrorInLookup instead of FatalErrorInLookup 2019-07-16 10:26:51 +02:00
Mark Olesen
beefee48d4 COMP: adjust compilation order with updated interdependencies
- Eg, with surface writers now in surfMesh, there are fewer libraries
  depending on conversion and sampling.

COMP: regularize linkage ordering and avoid some implicit linkage (#1238)
2019-04-28 14:44:33 +02:00