Commit Graph

148 Commits

Author SHA1 Message Date
Mark Olesen
b3464d8afc COMP: wmake rules for AMD (clang-based) compiler (#1627)
- not fully tested
2020-05-06 13:11:09 +02:00
Mark Olesen
78dc8c6ba6 CONFIG: refactor common link rules, support FOAM_EXTRA_CFLAGS (#1256)
- additional cgal-headers-only rules (future use)

COMP: add -lgmp for CGAL with mpfr linkage
2020-05-06 13:10:30 +02:00
Mark Olesen
9b4462e07b CONFIG: bump API to 2003
- various changes
2020-04-21 15:09:12 +02:00
Mark Olesen
9cfa5fe454 Merge remote-tracking branch 'origin/master' into develop 2020-04-21 15:07:35 +02:00
Mark Olesen
6691e6563c COMP: adjust for CGAL-1.14 changes 2020-04-21 14:59:07 +02:00
Mark Olesen
9aae45fa51 Merge remote-tracking branch 'origin/master' into develop 2020-04-16 00:45:11 +02:00
Mark Olesen
4200774d35 CONFIG: improve support for compiler derivatives (#1671)
- add '[-+.~]' to the recognized qualifiers.
  This allows simple readable names such as

      WM_COMPILER=Clang-vendor

  but also opens the FUTURE (not yet supported) possibility of
  combining in additional information. For example,

      WM_COMPILER=Clang~openmp
      WM_COMPILER=Clang+cuda~openmp

  by using '+' (add) and '~' (subtract) notation similar to what
  spack uses.

CONFIG: support 'override' rules

- if present, compiler-family 'override' rules are included after
  compiler-family 'general' rules have been included. This allows a
  central means for including dynamically generated content to
  override some values.

  Some examples:

  To handle different gcc versions (system compiler):

  wmake/rules/...Gcc/override

  ```
  ifneq (,$(findstring 9, $(WM_COMPILER)))
      cc  := gcc-9
      CC  := g++-9 -std=c++11
  endif
  ```

  To handle different openmp on Darwin (#1656):

  wmake/rules/darwin64Clang/override

  ```
  # Use libomp (not libgomp) unless openmp is disabled
  ifeq (,$(findstring "~openmp", "$(WM_COMPILER)"))
      COMP_OPENMP = -DUSE_OMP -Xpreprocessor -fopenmp
      LINK_OPENMP = -lomp
  else
      include $(GENERAL_RULES)/no-openmp
  endif
  ```

  This treatment arguably fits into wmake/rules/darwin64Clang/general,
  but it serves to illustrate a possible use case.
2020-04-15 13:18:31 +02:00
Mark Olesen
04b5291c55 CONFIG: handle openmp on Darwin (#1656)
- requires -Xpreprocessor
- uses 'libomp' (no 'libgomp' link)
2020-04-15 13:18:19 +02:00
Mark Olesen
f644d78bde Merge remote-tracking branch 'origin/master' into develop 2020-04-06 12:38:57 +02:00
Mark Olesen
a8b6d01b87 CONFIG: relocate wmake binaries into project platforms/tools (#1647)
- can aid when creating source-only or binary-only packages
2020-04-06 08:32:42 +02:00
Mark Olesen
ac8b64df46 CONFIG: support FOAM_EXTRA_CXXFLAGS (#1256)
- allows custom tuning of compilation parameters
2020-03-16 12:03:58 +01:00
Mark Olesen
2892b78d72 CONFIG: support FOAM_EXTRA_CXXFLAGS (#1256)
- allows custom tuning of compilation parameters
2020-02-20 12:18:12 +01:00
Mark Olesen
2d416a68a0 CONFIG: bump API to 2002
- changes in IOstreamOption, Switch, writeObject
2020-02-19 23:36:47 +01:00
Mark Olesen
449ba56750 CONFIG: bump API to 2001 2020-01-23 14:22:27 +01:00
Mark Olesen
9edaf8bfa5 CONFIG: default compilation is 'Opt' in Makefiles
- only include compiler-family rules for C++ once

STYLE: minor cleanup of wmake/src Makefile
2019-12-16 11:22:16 +01:00
Mark Olesen
69a8369541 COMP: add note about gcc-9 and deprecated-copy 2019-12-13 20:54:28 +01:00
Mark Olesen
89fb73d2a3 COMP: disable some compiler warnings
- The -Wno-deprecated-copy flag for gcc-9.2.0

  In the future we may indeed wish to explicitly request default
  generated constructors and assignment operators, but at the moment
  these are still acceptable.

- The -Wno-alloc-size-larger-than flag for mingw compilations

  Related to differences in PTRDIFF_MAX vs SIZE_MAX on the target.
  Several issues related to this can be found in the gcc bug reports
  and on stackoverflow etc.
2019-12-11 20:42:11 +01:00
Mark Olesen
bc51349d75 CONFIG: bump API to 1912 (pre-release)
- update repository links
2019-12-11 09:19:32 +01:00
Mark Olesen
3a816006dc COMP: support m4 include directories for wrap-lemon
Set the m4 -I include accordingly to have the folllowing:
  - the directory of the parser.
  - include/ in the top-level source tree of the current target
    (eg, src/finiteVolume/include-m4/ when compiling libfiniteVolume)
  - include/ from OpenFOAM

Additional -dry-run option for makeParser, wrap-lemon for expanding m4
only.

Extend m4 wrapping support to include bison as well.
2019-12-06 16:15:07 +01:00
Mark Olesen
9e6683f7bc ENH: add conditionals to #eval (string to scalar)
Example,

     ($radius > 10) ? sin(degToRad(45)) : cos(degToRad(30))

- protect division and modulo against zero-divide.

- add scanner/parser debugging switches in the namespace,
  selectable as "stringToScalar". For example,

    debug parser:  foamDictionary -debug-switch stringToScalar=2
    debug scanner: foamDictionary -debug-switch stringToScalar=4
    debug both:    foamDictionary -debug-switch stringToScalar=6
2019-11-19 14:22:03 +01:00
Mark Olesen
1ddcdb083e ENH: add support for m4 filtering of lemon grammars 2019-10-11 09:24:04 +02:00
Mark Olesen
2c11d875ad CONFIG: bump API to 1909 to reflect #eval directive 2019-10-01 14:27:16 +02:00
Mark Olesen
4a6cd8f194 COMP: update make rules for lemon, add helper infrastructure for ragel 2019-09-27 11:05:35 +02:00
Mark Olesen
f7528a2ac5 COMP: fix inconsistent bison make rule
- generated C++ files, but didn't use C++ compiler
2019-09-26 10:41:16 +02:00
Mark Olesen
894645f9e1 CONFIG: update wmake rules for parsers
- include ragel and lemon

- rename pre-generated files to ".cc" so that they are more
  recognizable as being different from regular file content.
2019-08-16 10:06:08 +02:00
Mark Olesen
508277d0f8 COMFIG: update flex make rules to use '-f' for C-code as well
- add additional rule (ending '.ll') for the combination of
  flex for C-code but compiling the result as C++.
  This can be needed for re-entrant parsers.

- update bison rule to handle renaming of skeleton files.
  Use a wrap-bison script to manage this.
2019-08-23 17:34:25 +02:00
Mark Olesen
60517236fd CONFIG: bump API to 1908 to reflect is_contiguous handling 2019-08-13 16:26:30 +02:00
Mark Olesen
1b4b127af5 CONFIG: harmonize adios1, adios2 config files. Add to setup. 2019-07-31 13:21:52 +02:00
Mark Olesen
481661dabe CONFIG: bump API to 1907 to register any changes in keywords 2019-07-14 19:25:30 +02:00
Mark Olesen
16784c6b06 CONFIG: reduce reliance on WM_ARCH_OPTION (#517)
- now only needed when specify compiling -m32 on a 64-bit system.

  Internally use the __SIZEOF_LONG__ compiler macro (gcc, icc, llvm)
  to define when long is actually an int32_t.
2019-06-14 14:47:35 +02:00
Mark Olesen
f05ff81722 CONFIG: bump API to 1906 (pre-release)
- adjust copyright dates for manpages
2019-06-13 18:22:10 +02:00
Mark Olesen
8928ac54bd COMP: use standard compiler macros when distinguishing the OS
- replace (darwin) with (__APPLE__)
- replace (solarisGcc) with (__sun__ && __GNUC__)
- instead of 'darwin' -> '__APPLE'

- cease with passing a -D$(WM_ARCH) define since this adds no useful
  additional information and isn't used anywhere.

Reference
http://nadeausoftware.com/articles/2012/01/c_c_tip_how_use_compiler_predefined_macros_detect_operating_system

--

COMP: Extend size disambiguation on long (#1238)
2019-04-12 18:42:30 +02:00
Mark Olesen
787325a916 COMP: manage cpu architecture with cARCH, c++ARCH internal make variables
- allows better separation from compiler settings

- use -fPIC instead of legacy -KPIC for intel compiler
2019-04-12 12:59:11 +02:00
Mark Olesen
51aae5f34d CONFIG: bump API to 1904 for changes in interaction with external MPI 2019-04-10 18:00:04 +02:00
Mark Olesen
eb6ccdf7b1 CONFIG: adjust adios config paths 2019-04-10 16:08:21 +02:00
Mark Olesen
d2eb50832c ENH: add handling of lib/exe file extensions in makefile (#1238)
- relocates some logic from makefiles/general into platform-specific
  overrides
2019-03-14 10:42:57 +01:00
Mark Olesen
a2fb1d0bdd COMP: add wmake rules for Pgi compiler (#1234) 2019-03-11 15:56:40 +01:00
Mark Olesen
e46b241378 CONFIG: bump API version number to 1902 to register changes in surface writers 2019-03-11 15:28:55 +01:00
Mark Olesen
fd8379fdbe CONFIG: update MPICH and MVAPICH versions/rules
- Note: mpich now builds libmpi.so instead of libmpich.so

- define both -DMPICH_SKIP_MPICXX and -DOMPI_SKIP_MPICXX regardless of
  using openmpi or mpich. This simplifies the files and does not harm.
2019-02-14 18:09:37 +01:00
Mark Olesen
97994734d2 CONFIG: bump API version number to 1901 to register recent changes
- objectRegistry search, erase methods
  - clip, minMax
  - function object triggering
  ...
2019-02-06 12:01:29 +01:00
Mark Olesen
ef6c2ef590 CONFIG: combine wmake rules for KNL architecture as a compile option
- instead of

      WM_COMPILER=GccKNL WM_COMPILE_OPTION=Opt

      -> linux64GccKNLDPInt32Opt

  now specify

      WM_COMPILER=Gcc  WM_COMPILE_OPTION=OptKNL

      -> linux64GccDPInt32OptKNL

This makes it easier (and more obvious) for adding different tweaks
without needing to generate too many files.
Eg,

    cd wmake/rules/linux64Gcc

    cp cOpt   cOptBdw
    cp c++Opt c++OptBdw

    edit these two files and then use WM_COMPILE_OPTION=OptBdw

CONFIG: provide some default c/c++ flags in General compiler rules

- can make is easier when deriving new compile options, and ensures
  that '-02' is enabled as an initial default.
2019-01-25 17:39:05 +01:00
Mark Olesen
4ecdb2512d CONFIG: add llvm-7.0.1
STYLE: generalize rule for obtaining compiler stem
2019-01-02 11:08:21 +01:00
mattijs
e17f6073b9 CONFIG: bump API version number to 1812 to register recent changes 2018-12-13 15:23:04 +00:00
Mark Olesen
6c68c34e1a ENH: update handling of versioning and make control (issue #1010)
- Use the OPENFOAM define (eg, 1806, 1812), which normally corresponds
  to a major release, to define an API level. This remains consistent
  within a release cycle and means that it is possible to manage
  several sub-versions and continue to have a consistent lookup.

  The current API value is updated automatically during the build
  and cached as meta data for later use, even when the wmake/ directory
  is missing or OpenFOAM has not yet be initialized.

  The version information reported on program start or with -help
  usage adjusted to reflect this. The build tag from git now also
  carries the date as being more meaningful to trace than a hash
  value.

- Update etc/bashrc and etc/cshrc to obtain the project directory
  directly instead of via its prefix directory. The value obtained
  corresponds to an absolute path, from which the prefix directory
  can be obtained.

  The combination of these changes removes the reliance on any
  particular directory naming convention.
  For example,

     With an 1812 version (API level):

     WM_PROJECT_VERSION=myVersion

     installed as /some/path/somewhere/openfoam-mySandbox

  This makes the -prefix, -foamInstall, -projectVersion, -version
  values of foamEtcFiles, and similar entries for foamConfigurePaths
  superfluous.

  WM_PROJECT_INST_DIR is no longer required or used

ENH: improve handling and discovery of ThirdParty

- improve the flexibility and reusability of ThirdParty packs to cover
  various standard use cases:

    1. Unpacking initial release tar files with two parallel directories
       - OpenFOAM-v1812/
       - ThirdParty-v1812/

    2. With an adjusted OpenFOAM directory name, for whatever reason
       - OpenFOAM-v1812-myCustom/
       - openfoam-1812-other-info/

    3. Operating with/without ThirdParty directory

  To handle these use cases, the following discovery is used.

  Note PROJECT = the OpenFOAM directory `$WM_PROJECT_DIR`
       PREFIX = the parent directory
       VERSION = `$WM_PROJECT_VERSION`
       API = `$WM_PROJECT_API`, as per `foamEtcFiles -show-api`

   0. PROJECT/ThirdParty
      - for single-directory installations

   1. PREFIX/ThirdParty-VERSION
      - this corresponds to the traditional approach

   2. PREFIX/ThirdParty-vAPI
      - allows for an updated value of VERSION (eg, v1812-myCustom)
        without requiring a renamed ThirdParty. The API value
        would still be '1812' and the original ThirdParty-v1812/
        would be found.

   3. PREFIX/ThirdParty-API
      - this is the same as the previous example, but using an unadorned
        API value. This also makes sense if the chosen version name also
        uses the unadorned API value in its naming
        (eg, 1812-patch190131, 1812.19W03)

   4. PREFIX/ThirdParty-common
      - permits maximum reuse for various versions, but only for
        experienced user who are aware of potential version
        incompatibilities

   Directory existence is checked as is the presence of an Allwmake file
   or a platforms/ directory. This reduces the potential of false positive
   matches and limits the selection to directories that are either
   with sources (has the Allwmake file), or pre-compiled binaries (has
   the platforms/ directory).

   If none of the explored directories are found to be suitable,
   it reverts to using a PROJECT/ThirdParty dummy location since
   this is within the project source tree and can be trusted to
   have no negative side-effects.

ENH: add csh support to foamConfigurePaths

- this removes the previously experienced inconsistence in config file
  contents.

REMOVED: foamExec

- was previously used when switching versions and before the
  bashrc/cshrc discovery logic was added. It is now obsolete.
2018-12-02 18:25:57 +01:00
Mark Olesen
628b2445fc ENH: improve setup for paraview
- removed reliance on ParaView_INCLUDE_DIR variable for conveying the
  major.minor version information when compiling. This can be somewhat
  fragile and also adds variable that is an unnecessary when running
  (only used when compiling).

  Instead use `have_pvplugin_support` function in paraviewFunctions
  wmake script to determine the maj.min from the PV_PLUGIN_PATH
  since we have already defined the output path there with paraview
  maj.min numbering.

  Can now build with paraview from the operating system,
  provided that it has develop headers available.

      ParaView_VERSION=system

  In the etc/config.sh/paraview setup, the maj.min is taken from
  the corresponding `paraview --version` output and used when
  defining the PV_PLUGIN_PATH.

  During the build, the include path taken from `paraview-config`
  for a system installation, from the guess installation root
  of the paraview binary, or ParaView_DIR otherwise.

NB: using a system ParaView for building runTimePostProcessing is unsupported.

- these types of builds appear to have various library resolution issues
  (eg, libexpat not being loaded). Additionally, the build logic does
  not yet cover this type of use case.
2018-11-29 01:48:00 +01:00
Mark Olesen
820b63e0b2 CONFIG: bump API version number to 1811 to register recent changes 2018-11-26 15:14:01 +01:00
Mark Olesen
6697bb4735 ENH: improve, simplify, rationalize coordinate system handling (issue #863)
Previously the coordinate system functionality was split between
coordinateSystem and coordinateRotation. The coordinateRotation stored
the rotation tensor and handled all tensor transformations.

The functionality has now been revised and consolidated into the
coordinateSystem classes. The sole purpose of coordinateRotation
is now just to provide a selectable mechanism of how to define the
rotation tensor (eg, axis-angle, euler angles, local axes) for user
input, but after providing the appropriate rotation tensor it has
no further influence on the transformations.

--

The coordinateSystem class now contains an origin and a base rotation
tensor directly and various transformation methods.

  - The origin represents the "shift" for a local coordinate system.

  - The base rotation tensor represents the "tilt" or orientation
    of the local coordinate system in general (eg, for mapping
    positions), but may require position-dependent tensors when
    transforming vectors and tensors.

For some coordinate systems (currently the cylindrical coordinate system),
the rotation tensor required for rotating a vector or tensor is
position-dependent.

The new coordinateSystem and its derivates (cartesian, cylindrical,
indirect) now provide a uniform() method to define if the rotation
tensor is position dependent/independent.

The coordinateSystem transform and invTransform methods are now
available in two-parameter forms for obtaining position-dependent
rotation tensors. Eg,

      ... = cs.transform(globalPt, someVector);

In some cases it can be useful to use query uniform() to avoid
storage of redundant values.

      if (cs.uniform())
      {
          vector xx = cs.transform(someVector);
      }
      else
      {
          List<vector> xx = cs.transform(manyPoints, someVector);
      }

Support transform/invTransform for common data types:
   (scalar, vector, sphericalTensor, symmTensor, tensor).

====================
  Breaking Changes
====================

- These changes to coordinate systems and rotations may represent
  a breaking change for existing user coding.

- Relocating the rotation tensor into coordinateSystem itself means
  that the coordinate system 'R()' method now returns the rotation
  directly instead of the coordinateRotation. The method name 'R()'
  was chosen for consistency with other low-level entities (eg,
  quaternion).

  The following changes will be needed in coding:

      Old:  tensor rot = cs.R().R();
      New:  tensor rot = cs.R();

      Old:  cs.R().transform(...);
      New:  cs.transform(...);

  Accessing the runTime selectable coordinateRotation
  has moved to the rotation() method:

      Old:  Info<< "Rotation input: " << cs.R() << nl;
      New:  Info<< "Rotation input: " << cs.rotation() << nl;

- Naming consistency changes may also cause code to break.

      Old:  transformVector()
      New:  transformPrincipal()

  The old method name transformTensor() now simply becomes transform().

====================
  New methods
====================

For operations requiring caching of the coordinate rotations, the
'R()' method can be used with multiple input points:

       tensorField rots(cs.R(somePoints));

   and later

       Foam::transformList(rots, someVectors);

The rotation() method can also be used to change the rotation tensor
via a new coordinateRotation definition (issue #879).

The new methods transformPoint/invTransformPoint provide
transformations with an origin offset using Cartesian for both local
and global points. These can be used to determine the local position
based on the origin/rotation without interpreting it as a r-theta-z
value, for example.

================
  Input format
================

- Streamline dictionary input requirements

  * The default type is cartesian.
  * The default rotation type is the commonly used axes rotation
    specification (with e1/e2/3), which is assumed if the 'rotation'
    sub-dictionary does not exist.

    Example,

    Compact specification:

        coordinateSystem
        {
            origin  (0 0 0);
            e2      (0 1 0);
            e3      (0.5 0 0.866025);
        }

    Full specification (also accepts the longer 'coordinateRotation'
    sub-dictionary name):

        coordinateSystem
        {
            type    cartesian;
            origin  (0 0 0);

            rotation
            {
                type    axes;
                e2      (0 1 0);
                e3      (0.5 0 0.866025);
            }
        }

   This simplifies the input for many cases.

- Additional rotation specification 'none' (an identity rotation):

      coordinateSystem
      {
          origin  (0 0 0);
          rotation { type none; }
      }

- Additional rotation specification 'axisAngle', which is similar
  to the -rotate-angle option for transforming points (issue #660).
  For some cases this can be more intuitive.

  For example,

      rotation
      {
          type    axisAngle;
          axis    (0 1 0);
          angle   30;
      }
  vs.
      rotation
      {
          type    axes;
          e2      (0 1 0);
          e3      (0.5 0 0.866025);
      }

- shorter names (or older longer names) for the coordinate rotation
  specification.

     euler         EulerRotation
     starcd        STARCDRotation
     axes          axesRotation

================
  Coding Style
================
- use Foam::coordSystem namespace for categories of coordinate systems
  (cartesian, cylindrical, indirect). This reduces potential name
  clashes and makes a clearer declaration. Eg,

      coordSystem::cartesian csys_;

  The older names (eg, cartesianCS, etc) remain available via typedefs.

- added coordinateRotations namespace for better organization and
  reduce potential name clashes.
2018-10-01 13:54:10 +02:00
Mark Olesen
f00c7a655c COMP: rename dictionary::read<T> to dictionary::readEntry<T>
- avoids compiler ambiguity when virtual methods such as
  IOdictionary::read() exist.

- the method was introduced in 1806, and was thus not yet widely used
2018-07-30 15:52:40 +02:00
Mark Olesen
94a89d530a COMP: reduce compiler warnings for gcc-7
- ignore implicit-fallthrough for ragel generated code.

- add -Wno-deprecated-declarations for c++LESSWARN.
  These principally associated with older CGAL versions and their use
  of particular mpfr routines.
2018-07-24 09:29:01 +02:00
Mark Olesen
e3f85039a0 CONFIG: set API version number to 1806 for pre-release branch 2018-06-13 13:10:14 +02:00