Commit Graph

48 Commits

Author SHA1 Message Date
Mark Olesen
c9333a5ac8 ENH: improve flexibility of error, messageStream output
- provide a plain stream() method on messageStream to reduce reliance
  on casting operators and slightly opaque operator()() calls etc

- support alternative stream for messageStream serial output.
  This can be used to support local redirection of output.
  For example,

     refPtr<OFstream> logging;   // or autoPtr, unique_ptr etc

     // Later...
     Info.stream(logging.get())
        << "Detailed output ..." << endl;

  This will use the stdout semantics in the normal case, or allow
  redirection to an output file if a target output stream is defined,
  but still effectively use /dev/null on non-master processes.

  This is mostly the same as this ternary

      (logging ? *logging : Info())

  except that the ternary could be incorrect on sub-processes,
  requires more typing etc.

ENH: use case-relative names of dictionary, IOstream for FatalIOError

- normally yields more easily understandable information
2021-11-03 11:46:13 +01:00
Mark Olesen
cdbc3e2de6 ENH: List/DynamicList appendUniq() method
- affords some code reduction.

STYLE: use HashSet insert() without found() check in more places
2021-04-19 16:33:42 +00:00
Andrew Heather
b012475c01 ENH: snappyLayerDriver - ensure parallel consistent rebuilding of face centres 2020-12-15 20:38:41 +00:00
Mattijs Janssens
46dbfabd9d ENH: primitiveMesh: make geometry calculation runtime selectable
This adds a 'geometry' scheme section to the system/fvSchemes:

geometry
{
    type            highAspectRatio;
}

These 'fvGeometryMethod's are used to calculate
- deltaCoeffs
- nonOrthoCoeffs
etc and can even modify the basic face/cellCentres calculation.
2020-12-11 10:31:34 +00:00
Mark Olesen
7349b97ecc STYLE: use labelRange for identity 2020-11-25 19:53:02 +01:00
mattijs
146a1d1b67 ENH: snappyHexMesh: par extrusion. Fixes #1923 2020-11-16 11:22:56 +00:00
mattijs
ab55157358 BUG: snappyHexMesh: fixes #1836.
When truncating layers in one go (nBufferCellsNoExtrude -1) it
should set the nCells per face to be the min of the number of points
per edge.
2020-09-10 14:09:58 +01:00
Mark Olesen
12c91b9472 STYLE: check autoPtr as plain bool instead of valid()
- cleaner code, more similarity with unique_ptr

  Now
      if (ptr)
      if (!ptr)

  instead
      if (ptr.valid())
      if (!ptr.valid())
2020-07-16 11:39:24 +02:00
Mark Olesen
8cfb483054 STYLE: some general spelling fixes 2020-05-04 09:15:21 +02:00
OpenFOAM bot
e9219558d7 GIT: Header file updates 2019-10-31 14:48:44 +00:00
Mark Olesen
f3670521cd STYLE: use std:: qualifier on ::abort, ::exit
- consistent with use of <cstdlib> and makes for a stronger distinct
  from Foam::abort etc.
2019-04-03 20:24:30 +02:00
mattijs
83e321d3e4 ENH: snappyHexMesh: allow cross-patch merging of patch faces. Fixes #1255. 2019-03-27 15:04:48 +00:00
Mark Olesen
bd78da22e7 ENH: for-range, forAllIters() ... in mesh/
- reduced clutter when iterating over containers
2019-01-07 09:20:51 +01:00
Mark Olesen
60234ab007 STYLE: reduced nesting on return branching 2019-02-13 08:06:36 +01:00
OpenFOAM bot
154029ddd0 BOT: Cleaned up header files 2019-02-06 12:28:23 +00:00
mattijs
7bf4bcf4ba ENH: snappyHexMesh: Size printing, formatting. See #972. 2018-11-29 10:56:38 +00:00
mattijs
0e5325bff9 ENH: snappyHexMesh: add -dry-run argument. See #972. 2018-11-26 12:23:01 +00:00
mattijs
f8985566e9 BUG: snappyHexMesh: extrude non-local baffle. Fixes #1175. 2019-01-21 15:27:51 +00:00
Mark Olesen
1d85fecf4d ENH: use Zero when zero-initializing types
- makes the intent clearer and avoids the need for additional
  constructor casting. Eg,

      labelList(10, Zero)    vs.  labelList(10, 0)
      scalarField(10, Zero)  vs.  scalarField(10, scalar(0))
      vectorField(10, Zero)  vs.  vectorField(10, vector::zero)
2018-12-11 23:50:15 +01:00
Mark Olesen
64c3e484bb STYLE: add nBoundaryFaces() method to primitiveMesh
- nBoundaryFaces() is often used and is identical to
  (nFaces() - nInternalFaces()).

- forward the mesh nInternalFaces() and nBoundaryFaces() to
  polyBoundaryMesh as nFaces() and start() respectively,
  for use when operating on a polyBoundaryMesh.

STYLE:

- use identity() function with starting offset when creating boundary maps.

     labelList map
     (
         identity(mesh.nBoundaryFaces(), mesh.nInternalFaces())
     );

  vs.

     labelList map(mesh.nBoundaryFaces());
     forAll(map, i)
     {
         map[i] = mesh.nInternalFaces() + i;
     }
2018-09-27 10:17:30 +02:00
Mark Olesen
ca5d91239d STYLE: use edgeHashes include
STYLE: use initial hash size 128 instead of 100 in a few places
2018-08-08 23:54:27 +02:00
Mark Olesen
10941280cb BUG: incorrect bitSet auto-vivify in snappy
- should use bitSet::set() and not bitSet::operator[] to auto-vivify
  out-of-range entries

- use bitSet::test() instead of bitSet::operator[] when testing
  non-const variables - circumvents any potential out-of-range issues.
2018-06-07 14:43:10 +02:00
Mark Olesen
6b6b36afd3 STYLE: revert bitSet/HashSet setMany() to set() method (issue #837)
- improves backward compatibility and more naming consistency.
  Retain setMany(iter1, iter2) to avoid ambiguity with the
  PackedList::set(index, value) method.
2018-05-29 17:38:02 +02:00
Mark Olesen
bac943e6fc ENH: new bitSet class and improved PackedList class (closes #751)
- The bitSet class replaces the old PackedBoolList class.
  The redesign provides better block-wise access and reduced method
  calls. This helps both in cases where the bitSet may be relatively
  sparse, and in cases where advantage of contiguous operations can be
  made. This makes it easier to work with a bitSet as top-level object.

  In addition to the previously available count() method to determine
  if a bitSet is being used, now have simpler queries:

    - all()  - true if all bits in the addressable range are empty
    - any()  - true if any bits are set at all.
    - none() - true if no bits are set.

  These are faster than count() and allow early termination.

  The new test() method tests the value of a single bit position and
  returns a bool without any ambiguity caused by the return type
  (like the get() method), nor the const/non-const access (like
  operator[] has). The name corresponds to what std::bitset uses.

  The new find_first(), find_last(), find_next() methods provide a faster
  means of searching for bits that are set.

  This can be especially useful when using a bitSet to control an
  conditional:

  OLD (with macro):

      forAll(selected, celli)
      {
          if (selected[celli])
          {
              sumVol += mesh_.cellVolumes()[celli];
          }
      }

  NEW (with const_iterator):

      for (const label celli : selected)
      {
          sumVol += mesh_.cellVolumes()[celli];
      }

      or manually

      for
      (
          label celli = selected.find_first();
          celli != -1;
          celli = selected.find_next()
      )
      {
          sumVol += mesh_.cellVolumes()[celli];
      }

- When marking up contiguous parts of a bitset, an interval can be
  represented more efficiently as a labelRange of start/size.
  For example,

  OLD:

      if (isA<processorPolyPatch>(pp))
      {
          forAll(pp, i)
          {
              ignoreFaces.set(i);
          }
      }

  NEW:

      if (isA<processorPolyPatch>(pp))
      {
          ignoreFaces.set(pp.range());
      }
2018-03-07 11:21:48 +01:00
Andrew Heather
a230e8d408 STYLE: Correcting typos 2018-03-28 17:14:16 +01:00
mattijs
cb14a2020b ENH: snappyHexMesh: exclude feature angle analysis. See #699. 2018-04-11 10:58:46 +01:00
Mark Olesen
2f86cdc712 STYLE: more consistent use of dimensioned Zero
- when constructing dimensioned fields that are to be zero-initialized,
  it is preferrable to use a form such as

      dimensionedScalar(dims, Zero)
      dimensionedVector(dims, Zero)

  rather than

      dimensionedScalar("0", dims, 0)
      dimensionedVector("zero", dims, vector::zero)

  This reduces clutter and also avoids any suggestion that the name of
  the dimensioned quantity has any influence on the field's name.

  An even shorter version is possible. Eg,

      dimensionedScalar(dims)

  but reduces the clarity of meaning.

- NB: UniformDimensionedField is an exception to these style changes
  since it does use the name of the dimensioned type (instead of the
  regIOobject).
2018-03-16 10:24:03 +01:00
Mark Olesen
5d1fb23555 ENH: code reduction in PackedList, PackedBoolList (issue #751)
- eliminate iterators from PackedList since they were unused, had
  lower performance than direct access and added unneeded complexity.

- eliminate auto-vivify for the PackedList '[] operator.
  The set() method provides any required auto-vivification and
  removing this ability from the '[]' operator allows for a lower
  when accessing the values. Replaced the previous cascade of iterators
  with simpler reference class.

PackedBoolList:

- (temporarily) eliminate logic and addition operators since
  these contained partially unclear semantics.

- the new test() method tests the value of a single bit position and
  returns a bool without any ambiguity caused by the return type
  (like the get() method), nor the const/non-const access (like
  operator[] has). The name corresponds to what std::bitset uses.

- more consistent use of PackedBoolList test(), set(), unset() methods
  for fewer operation and clearer code. Eg,

      if (list.test(index)) ...    |  if (list[index]) ...
      if (!list.test(index)) ...   |  if (list[index] == 0u) ...
      list.set(index);             |  list[index] = 1u;
      list.unset(index);           |  list[index] = 0u;

- deleted the operator=(const labelUList&) and replaced with a setMany()
  method for more clarity about the intended operation and to avoid any
  potential inadvertent behaviour.
2018-03-13 08:32:40 +01:00
mattijs
3269ba0df9 ENH: shm: Parallel consistent extrusion. Fixes #759. 2018-03-08 15:07:24 +00:00
Mark Olesen
660f3e5492 ENH: cleanup autoPtr class (issue #639)
Improve alignment of its behaviour with std::unique_ptr

  - element_type typedef
  - release() method - identical to ptr() method
  - get() method to get the pointer without checking and without releasing it.
  - operator*() for dereferencing

Method name changes

  - renamed rawPtr() to get()
  - renamed rawRef() to ref(), removed unused const version.

Removed methods/operators

  - assignment from a raw pointer was deleted (was rarely used).
    Can be convenient, but uncontrolled and potentially unsafe.
    Do allow assignment from a literal nullptr though, since this
    can never leak (and also corresponds to the unique_ptr API).

Additional methods

  - clone() method: forwards to the clone() method of the underlying
    data object with argument forwarding.

  - reset(autoPtr&&) as an alternative to operator=(autoPtr&&)

STYLE: avoid implicit conversion from autoPtr to object type in many places

- existing implementation has the following:

     operator const T&() const { return operator*(); }

  which means that the following code works:

       autoPtr<mapPolyMesh> map = ...;
       updateMesh(*map);    // OK: explicit dereferencing
       updateMesh(map());   // OK: explicit dereferencing
       updateMesh(map);     // OK: implicit dereferencing

  for clarity it may preferable to avoid the implicit dereferencing

- prefer operator* to operator() when deferenced a return value
  so it is clearer that a pointer is involve and not a function call
  etc    Eg,   return *meshPtr_;  vs.  return meshPtr_();
2018-02-26 12:00:00 +01:00
mattijs
f868b11a31 BUG: snappyHexMesh: incorrect feature angle. Fixes #699. 2018-01-08 11:50:33 +00:00
Mark Olesen
bc8420e14f STYLE: trailing whitespace, doxygen, error messages from fileOperation 2017-12-13 17:56:34 +01:00
Mark Olesen
7c1d8cb146 STYLE: more consistent use of labelUList and labelUIndList typedefs 2017-11-19 09:27:47 +01:00
Mark Olesen
7d7b0bfe84 STYLE: use list methods find/found instead of findIndex function 2017-10-24 19:07:34 +02:00
mattijs
8a52553b63 BUG: snappyHexMesh: extraneous debug printing. Fixes #485. 2017-05-31 08:59:36 +01:00
mattijs
4fea83d198 BUG: snappyHexMesh: trying to extrude non-manifold patches fails.
The typical topology is the one where boundary faces share non-consecutive
points (checkMesh reports this as 'Number of faces with non-consecutive shared points')
This is handled by no-extruding any of the vertices of both faces. Fixes #391.
2017-04-19 09:03:10 +01:00
Andrew Heather
76742baf40 GIT: Resolved conflict 2016-10-07 12:27:03 +01:00
Andrew Heather
8ff2e8f14d BUG: Corrected assignment to reference object 2016-10-07 12:26:09 +01:00
mattijs
749d68f888 Merge branch 'merge-foundation' of develop.openfoam.com:Development/OpenFOAM-plus into merge-foundation
Conflicts:
	src/mesh/snappyHexMesh/snappyHexMeshDriver/snappyLayerDriver.C
2016-10-05 17:58:13 +01:00
mattijs
762a202810 BUG: snappyHexMesh: assing to boundaryField. Fixes #260. 2016-10-05 17:52:54 +01:00
Andrew Heather
3dbd39146c STYLE: consistency updates 2016-09-27 15:17:55 +01:00
Andrew Heather
b9940cbbb1 COMP: Multiple changes - first clean build after latest merge - UNTESTED 2016-09-23 15:36:53 +01:00
Mark Olesen
cbc4e0d96f ENH: add maxMem information to profiling
- value corresponds to the max memory when the corresponding profiling
  is started.
  Only used when the top-level profiling has memInfo active.

- memInfo is disabled by default, since the new maxMem functionality
  otherwise adds overhead with every call.

tutorial:
    /lagrangian/reactingParcelFoam/verticalChannelLTS
2016-06-20 21:21:43 +02:00
Mark Olesen
37bf28c249 STYLE: rename Profiling -> profiling 2016-06-20 21:20:31 +02:00
Mark Olesen
e86d3f2e0e ENH: add preliminary profiling items into snappyHexMesh
- needs more refinement, but provides the general idea.
2016-06-18 01:00:55 +02:00
Andrew Heather
158a925235 ENH: Updated xxx::zero->Zero 2016-04-28 14:17:06 +01:00
Andrew Heather
b9313ef2fe ENH: Consistency updates after Foundation merge and code tidying 2016-04-25 16:46:56 +01:00
andy
d3157ac905 ENH: snappyHexMesh: Renamed auto* to snappy* to be consistent with latest Foundation changes 2016-04-25 11:52:18 +01:00