Commit Graph

232 Commits

Author SHA1 Message Date
Mark Olesen
d38de84d21 ENH: bundle Pstream:: AllGather methods
- bundles frequently used 'gather/scatter' patterns more consistently.

  - combineAllGather     -> combineGather + broadcast
  - listCombineAllGather -> listCombineGather + broadcast
  - mapCombineAllGather  -> mapCombineGather + broadcast
  - allGatherList        -> gatherList + scatterList
  - reduce               -> gather + broadcast (ie, allreduce)

- The allGatherList currently wraps gatherList/scatterList, but may be
  replaced with a different algorithm in the future.

STYLE: PstreamCombineReduceOps.H is mostly unneeded now
2022-03-31 15:56:04 +02:00
Mark Olesen
327c43f3e8 ENH: identityOp as equivalent to std::identity (C++20)
- similar to how noOp was defined, but with perfect forwarding

STYLE: combine Swap into stdFoam

STYLE: capitalize FileOp, NegateOp template parameters
2022-03-13 22:35:18 +01:00
Mark Olesen
62fc3bbc33 STYLE: broadcast instead of combineScatter/listCombineScatter/mapCombineScatter
- these are the same thing now and 'broadcast' expresses the intention
  more directly/consistently
2022-03-12 21:16:30 +01:00
Mark Olesen
47cd988296 ENH: eliminate code duplication in Circulator/ConstCirculator 2022-03-12 21:16:29 +01:00
Mark Olesen
c3e14ffdd5 ENH: refactor coordSet writers (#2347)
- the very old 'writer' class was fully stateless and always templated
  on an particular output type.

  This is now replaced with a 'coordSetWriter' with similar concepts
  as previously introduced for surface writers (#1206).

  - writers change from being a generic state-less set of routines to
    more properly conforming to the normal notion of a writer.

  - Parallel data is done *outside* of the writers, since they are used
    in a wide variety of contexts and the caller is currently still in
    a better position for deciding how to combine parallel data.

ENH: update sampleSets to sample on per-field basis (#2347)

- sample/write a field in a single step.

- support for 'sampleOnExecute' to obtain values at execution
  intervals without writing.

- support 'sets' input as a dictionary entry (as well as a list),
  which is similar to the changes for sampled-surface and permits use
  of changeDictionary to modify content.

- globalIndex for gather to reduce parallel communication, less code

- qualify the sampleSet results (properties) with the name of the set.
  The sample results were previously without a qualifier, which meant
  that only the last property value was actually saved (previous ones
  overwritten).

  For example,
  ```
    sample1
    {
        scalar
        {
            average(line,T) 349.96521;
            min(line,T)     349.9544281;
            max(line,T)     350;
            average(cells,T) 349.9854619;
            min(cells,T)    349.6589286;
            max(cells,T)    350.4967271;
            average(line,epsilon) 0.04947733869;
            min(line,epsilon) 0.04449639927;
            max(line,epsilon) 0.06452856475;
        }
        label
        {
            size(line,T)    79;
            size(cells,T)   1720;
            size(line,epsilon) 79;
        }
    }
  ```

ENH: update particleTracks application

- use globalIndex to manage original parcel addressing and
  for gathering. Simplify code by introducing a helper class,
  storing intermediate fields in hash tables instead of
  separate lists.

ADDITIONAL NOTES:

- the regionSizeDistribution largely retains separate writers since
  the utility of placing sum/dev/count for all fields into a single file
  is questionable.

- the streamline writing remains a "soft" upgrade, which means that
  scalar and vector fields are still collected a priori and not
  on-the-fly.  This is due to how the streamline infrastructure is
  currently handled (should be upgraded in the future).
2022-03-10 19:41:22 +01:00
Mark Olesen
61aef196ed STYLE: use single-parameter SubList where applicable (reduces clutter) 2022-01-31 20:08:52 +01:00
Mark Olesen
ba8d6bddcc ENH: use singleton method for accessing runtime selection
STYLE: use alias to mark partialFaceAreaWeightAMI deprecation after v2012
2021-11-05 17:21:27 +01:00
Mark Olesen
50995706a6 STYLE: remove unused private fields (foamyMesh)
- simplify handling of warnings for surfaceBooleanFeatures
2021-11-04 18:03:34 +01:00
Mark Olesen
0c15f773e0 STYLE: remove/replace unneeded SortableList 2021-07-15 16:47:27 +02:00
Mark Olesen
f2d634c49f ENH: cellShape::reset() - simplifies modification of existing shapes 2021-05-30 21:02:59 +02:00
Mark Olesen
95cd8ee75c ENH: improve hashing overloads of string-types and HashTable/HashSet
- additional dummy template parameter to assist with supporting
  derived classes. Currently just used for string types, but can be
  extended.

- provide hash specialization for various integer types.
  Removes the need for any forwarding.

- change default hasher for HashSet/HashTable from 'string::hash'
  to `Hash<Key>`. This avoids questionable hashing calls and/or
  avoids compiler resolution problems.

  For example,
  HashSet<label>::hasher and labelHashSet::hasher now both properly
  map to Hash<label> whereas previously HashSet<label> would have
  persistently mapped to string::hash, which was incorrect.

- standardize internal hashing functors.

  Functor name is 'hasher', as per STL set/map and the OpenFOAM
  HashSet/HashTable definitions.

  Older code had a local templated name, which added unnecessary
  clutter and the template parameter was always defaulted.
  For example,

      Old:  `FixedList<label, 3>::Hash<>()`
      New:  `FixedList<label, 3>::hasher()`
      Unchanged:  `labelHashSet::hasher()`

  Existing `Hash<>` functor namings are still supported,
  but deprecated.

- define hasher and Hash specialization for bitSet and PackedList

- add symmetric hasher for 'face'.
  Starts with lowest vertex value and walks in the direction
  of the next lowest value. This ensures that the hash code is
  independent of face orientation and face rotation.

NB:
  - some of keys for multiphase handling (eg, phasePairKey)
    still use yet another function naming: `hash` and `symmHash`.
    This will be targeted for alignment in the future.
2021-04-19 16:33:42 +00:00
Mark Olesen
b060378dca ENH: improve consistency of fileName handling windows/non-windows (#2057)
- wrap command-line retrieval of fileName with an implicit validate.

  Instead of this:
      fileName input(args[1]);
      fileName other(args["someopt"]);

  Now use this:
      auto input = args.get<fileName>(1);
      auto other = args.get<fileName>("someopt");

  which adds a fileName::validate on the inputs

  Because of how it is implemented, it will automatically also apply
  to argList getOrDefault<fileName>, readIfPresent<fileName> etc.

- adjust fileName::validate and clean to handle backslash conversion.
  This makes it easier to ensure that path names arising from MS-Windows
  are consistently handled internally.

- dictionarySearch: now check for initial '/' directly instead of
  relying on fileName isAbsolute(), which now does more things

BREAKING: remove fileName::clean() const method

- relying on const/non-const to control the behaviour (inplace change
  or return a copy) is too fragile and the const version was
  almost never used.

  Replace:
      fileName sanitized = constPath.clean();

  With:
      fileName sanitized(constPath);
      sanitized.clean());

STYLE: test empty() instead of comparing with fileName::null
2021-04-19 16:33:42 +00:00
Mark Olesen
cdbc3e2de6 ENH: List/DynamicList appendUniq() method
- affords some code reduction.

STYLE: use HashSet insert() without found() check in more places
2021-04-19 16:33:42 +00:00
Mark Olesen
fa645c2dac ENH: noexcept size_bytes() method for lists
- for use when the is_contiguous check has already been done outside
  the loop. Naming as per std::span.

STYLE: use data/cdata instead of begin

ENH: replace random_shuffle with shuffle, fix OSX int64 ambiguity
2021-03-09 09:49:31 +01:00
Mark Olesen
51cd7ceecb ENH: improvements for token methods
- direct check of punctuation.
  For example,

      while (!tok.isPunctuation(token::BEGIN_LIST)) ..

  instead of

  while (!(tok.isPunctuation() && tok.pToken() == token::BEGIN_LIST)) ..

  Using direct comparison (tok != token::BEGIN_LIST) can be fragile
  when comparing int values:

      int c = readChar(is);
      while (tok != c) ..  // Danger, uses LABEL comparison!

- direct check of word.
  For example,

      if (tok.isWord("uniform")) ..

  instead of

      if (tok.isWord() && tok.wordToken() == "uniform") ..

- make token lineNumber() a setter method

ENH: adjust internal compound method empty() -> moved()

- support named compound tokens

STYLE: setter method for stream indentation
2021-03-09 09:23:41 +01:00
Mark Olesen
496792f328 COMP: use single-parameter fvMeshDistribute 2021-03-08 15:34:39 +01:00
Mark Olesen
f8a0677a66 ENH: replace base implementation of Foam::Swap with std::swap
- eliminates a potentially invalid code branch.
  Since it essentially had the same internals as std::swap anyhow,
  make that more evident.

ENH: use std::swap for basic types

- makes it clearer that they do not rely on any special semantics
2021-02-16 14:30:36 +01:00
Mark Olesen
e71bf4445a GIT: fix edit errors 2021-02-10 12:43:07 +01:00
Mark Olesen
6cdf89dced ENH: use concise forms for walking processor and cyclic boundaries 2021-02-09 17:57:49 +01:00
Mark Olesen
be783632f2 ENH: isoSurfaceParams
- bundles selection and control parameters used when creating
  iso-surfaces. This simplifies selection and specification

- drop old compatibility handling of "cell" as a bool

- harmonize filter/regularisation flags for iso-surface

- for dictionary input, accept "isoMethod" and "isoAlgorithm" as being
  synonymous. Using "isoMethod" is less subject to typing errors.
2020-12-08 13:31:22 +01:00
Mark Olesen
6dd2cc808e CONFIG: provisional cuda rule. Update naming for CGAL rules 2020-11-17 21:29:07 +01:00
Mark Olesen
9eb73a92e2 TUT: fix use of "constant/triSurface" etc (#1887)
- use bracketed syntax (eg, "<constant>/triSurface") instead for
  implicit case resolution.
2020-10-28 16:04:12 +01:00
Mark Olesen
e18ff114a6 ENH: add UPstream::allProcs() method
- returns a range of `int` values that can be iterated across.
  For example,

      for (const int proci : Pstream::allProcs()) { ... }

  instead of

      for (label proci = 0; proci < Pstream::nProcs(); ++proci) { ... }
2020-09-28 14:25:59 +02:00
Mark Olesen
9423d2bd83 CONFIG: improve support for compiler/link options (#1830)
- introduce WM_COMPILE_CONTROL variable to convey control information
  into the build rules.

  The convention (as per spack):
      - '+' to select a feature
      - '~' to deselect a feature

  Eg, to select the gold linker, and disable openmp
  (spaces are not required):

      WM_COMPILE_CONTROL="+gold ~openmp"

CONFIG: accept FOAM_EXTRA_LDFLAGS for AMD, gold, Mingw linkers

CONFIG: generalize PROJECT_LIBS (-ldl used almost universally)
2020-09-07 09:45:51 +02:00
Mark Olesen
74a062d1d5 Merge remote-tracking branch 'origin/master' into develop 2020-07-28 08:42:12 +02:00
Mark Olesen
3baebcb101 STYLE: replace uses of autoPtr::empty() with bool check (#1775)
- less clutter using plain tests with the bool operator:

      (!ptr)  vs  (ptr.empty())
      (ptr)   vs  (!ptr.empty())
2020-07-16 08:58:22 +02:00
Mark Olesen
5dc04530d9 COMP: additional linkage libraries for AMD compiler (#1627) 2020-07-14 12:17:09 +02:00
Mark Olesen
3e43edf056 ENH: unify use of dictionary method names
- previously introduced `getOrDefault` as a dictionary _get_ method,
  now complete the transition and use it everywhere instead of
  `lookupOrDefault`. This avoids mixed usage of the two methods that
  are identical in behaviour, makes for shorter names, and promotes
  the distinction between "lookup" access (ie, return a token stream,
  locate and return an entry) and "get" access (ie, the above with
  conversion to concrete types such as scalar, label etc).
2020-06-02 17:26:03 +02:00
Mark Olesen
31b172217c ENH: support predicate checks for argList (similar to dictionary methods)
- Favour use of argList methods that are more similar to dictionary
  method names with the aim of reducing the cognitive load.

  * Silently deprecate two-parameter get() method in favour of the
    more familiar getOrDefault.
  * Silently deprecate opt() method in favour of get()

  These may be verbosely deprecated in future versions.
2020-06-02 13:51:18 +02:00
Mark Olesen
595579e01d COMP: use -iquotedir for including the local '.' directory
- adds into the include-quoted search list instead the general (-Idir)
  search list.

  * makes it less subject to ordering (since it will now generally be
    searched first) and makes it less subject to how duplicate removal
    is implemented. In some compilers (#1627), the last instance of
    a duplicate directory would be used and not the first instance.

  * removes clutter in some Make/options files

COMP: add missing linkage libraries
2020-05-06 13:06:40 +02:00
Mark Olesen
8cfb483054 STYLE: some general spelling fixes 2020-05-04 09:15:21 +02:00
Mark Olesen
8a5d108fd2 STYLE: update PrimitivePatch (#1648)
- simplified templating, which cleans up code and does not appear to
  break any normal user coding.

ENH: unique_ptr instead of homegrown demand-driven handling.
2020-04-30 15:52:42 +02:00
Mark Olesen
a456e9ae92 STYLE: relocate nonCoupledBoundaryTree into meshSearcher
- use point::uniform in more places
2020-02-24 18:41:02 +01:00
Mark Olesen
4e6caf8d61 STYLE: return Switch by value, not const-reference 2020-02-21 11:44:29 +01:00
Mark Olesen
4307e1719f STYLE: adjust names, locations for fileFormats
- renamed 'core/' -> 'base/' to avoid gitignore masking when re-adding
  files

- rename 'nas/' to 'nastran/' for more clarity

- relocated OBJstream from surfMesh to fileFormats

STYLE: remove unused parseNASCoord. Was deprecated 2017-09
2020-02-18 13:51:20 +01:00
Mark Olesen
ee96dba0cf STYLE: simplify Random constructors
COMP: use generated methods in a few more places
2020-01-21 12:12:44 +01:00
Mark Olesen
2a98c4e665 ENH: consistency improvements for surface patch handling (fixes #483)
- remove (unused) Istream constructors, prune some unused methods,
  rationalize write() vs writeDict().
  Deprecate inconsistent construction order.

- handle empty names for ".ftr" surface patches (for plain triSurface
  format) with double-quoted strings for more reliable streaming.
  Written on a single line.

  This is _backward_ compatible, but if users have been parsing these
  files manually, they will need to adjust their code.

Previously:
```
  (
  frt-fairing:001%1
  empty

  windshield:002%2
  empty
  ...
  )
```

Updated (with example handling of empty name):
```
  (
  frt-fairing:001%1 empty

  windshield:002%2 ""
  ...
  )
```
2020-01-16 10:07:26 +01:00
Mattijs Janssens
b8c2c0acf6 ENH: shm: support for automatic faceZones 2020-01-16 12:22:02 +00:00
Mark Olesen
1310e85225 ENH: support 'get()' for retrieving argList options
- previously only had 'opt<..>()' for options, but 'get<..>()'
  provides more similarity with dictionary methods.
  The 'opt<..>()' method is retained.
2019-11-26 21:07:11 +01:00
Mark Olesen
98467036b3 STYLE: regularize quoting and exit on failed 'cd' 2019-11-13 13:19:16 +01:00
Mark Olesen
ec7e3c88e4 ENH: test for WM_PROJECT_DIR being set/unset in scripts 2019-11-06 09:18:51 +01:00
Andrew Heather
fdf8d10ab4 Merge commit 'e9219558d7' into develop-v1906 2019-12-05 11:47:19 +00:00
OpenFOAM bot
e9219558d7 GIT: Header file updates 2019-10-31 14:48:44 +00:00
Mark Olesen
dcff32ea65 STYLE: use move insert in featurePointConformer 2019-09-30 09:40:59 +02:00
OpenFOAM bot
38b53e5346 STYLE: use default destructor in header definitions 2019-09-24 12:14:36 +02:00
Mark Olesen
1d79c0452c ENH: additional contiguous traits (#1378)
- change contiguous from a series of global functions to separate
  templated traits classes:

    - is_contiguous
    - is_contiguous_label
    - is_contiguous_scalar

  The static constexpr 'value' and a constexpr conversion operator
  allow use in template expressions.  The change also makes it much
  easier to define general traits and to inherit from them.

  The is_contiguous_label and is_contiguous_scalar are special traits
  for handling data of homogeneous components of the respective types.
2019-07-29 11:36:30 +02:00
Mark Olesen
5382c2f590 STYLE: fix namespace documentation for CGAL-related content 2019-07-30 18:15:48 +02:00
Mark Olesen
f94be1bebb ENH: use FatalIOErrorInLookup instead of FatalErrorInLookup 2019-07-16 10:26:51 +02:00
Mark Olesen
fb09f56aba ENH: use FatalErrorInLookup macros (#1362) 2019-07-12 18:00:00 +02:00
Mark Olesen
1d86fc4f6b ENH: add single-parameter sortedOrder() function 2019-07-17 11:08:40 +02:00