Commit Graph

110 Commits

Author SHA1 Message Date
Henry Weller
e4dc50dcb0 postProcessing: Replaced 'foamCalc' and the 'postCalc' utilities
with the more general and flexible 'postProcess' utility and '-postProcess' solver option

Rationale
---------

Both the 'postProcess' utility and '-postProcess' solver option use the
same extensive set of functionObjects available for data-processing
during the run avoiding the substantial code duplication necessary for
the 'foamCalc' and 'postCalc' utilities and simplifying maintenance.
Additionally consistency is guaranteed between solver data processing
and post-processing.

The functionObjects have been substantially re-written and generalized
to simplify development and encourage contribution.

Configuration
-------------

An extensive set of simple functionObject configuration files are
provided in

OpenFOAM-dev/etc/caseDicts/postProcessing

and more will be added in the future.  These can either be copied into
'<case>/system' directory and included into the 'controlDict.functions'
sub-dictionary or included directly from 'etc/caseDicts/postProcessing'
using the '#includeEtc' directive or the new and more convenient
'#includeFunc' directive which searches the
'<etc>/caseDicts/postProcessing' directories for the selected
functionObject, e.g.

functions
{
    #includeFunc Q
    #includeFunc Lambda2
}

'#includeFunc' first searches the '<case>/system' directory in case
there is a local configuration.

Description of #includeFunc
---------------------------

    Specify a functionObject dictionary file to include, expects the
    functionObject name to follow (without quotes).

    Search for functionObject dictionary file in
    user/group/shipped directories.
    The search scheme allows for version-specific and
    version-independent files using the following hierarchy:
    - \b user settings:
      - ~/.OpenFOAM/\<VERSION\>/caseDicts/postProcessing
      - ~/.OpenFOAM/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is set):
      - $WM_PROJECT_SITE/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_SITE/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is not set):
      - $WM_PROJECT_INST_DIR/site/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_INST_DIR/site/caseDicts/postProcessing
    - \b other (shipped) settings:
      - $WM_PROJECT_DIR/etc/caseDicts/postProcessing

    An example of the \c \#includeFunc directive:
    \verbatim
        #includeFunc <funcName>
    \endverbatim

postProcess
-----------

The 'postProcess' utility and '-postProcess' solver option provide the
same set of controls to execute functionObjects after the run either by
reading a specified set of fields to process in the case of
'postProcess' or by reading all fields and models required to start the
run in the case of '-postProcess' for each selected time:

postProcess -help

Usage: postProcess [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

 pimpleFoam -postProcess -help

Usage: pimpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

The functionObjects to execute may be specified on the command-line
using the '-func' option for a single functionObject or '-funcs' for a
list, e.g.

postProcess -func Q
postProcess -funcs '(div(U) div(phi))'

In the case of 'Q' the default field to process is 'U' which is
specified in and read from the configuration file but this may be
overridden thus:

postProcess -func 'Q(Ua)'

as is done in the example above to calculate the two forms of the divergence of
the velocity field.  Additional fields which the functionObjects may depend on
can be specified using the '-field' or '-fields' options.

The 'postProcess' utility can only be used to execute functionObjects which
process fields present in the time directories.  However, functionObjects which
depend on fields obtained from models, e.g. properties derived from turbulence
models can be executed using the '-postProcess' of the appropriate solver, e.g.

pisoFoam -postProcess -func PecletNo

or

sonicFoam -postProcess -func MachNo

In this case all required fields will have already been read so the '-field' or
'-fields' options are not be needed.

Henry G. Weller
CFD Direct Ltd.
2016-05-28 18:58:48 +01:00
Henry Weller
3eec5854be Standardized the selection of required and optional fields in BCs, fvOptions, functionObjects etc.
In most boundary conditions, fvOptions etc. required and optional fields
to be looked-up from the objectRegistry are selected by setting the
keyword corresponding to the standard field name in the BC etc. to the
appropriate name in the objectRegistry.  Usually a default is provided
with sets the field name to the keyword name, e.g. in the
totalPressureFvPatchScalarField the velocity is selected by setting the
keyword 'U' to the appropriate name which defaults to 'U':

        Property     | Description             | Required    | Default value
        U            | velocity field name     | no          | U
        phi          | flux field name         | no          | phi
        .
        .
        .

However, in some BCs and functionObjects and many fvOptions another
convention is used in which the field name keyword is appended by 'Name'
e.g.

        Property     | Description             | Required    | Default value
        pName        | pressure field name     | no          | p
        UName        | velocity field name     | no          | U

This difference in convention is unnecessary and confusing, hinders code
and dictionary reuse and complicates code maintenance.  In this commit
the appended 'Name' is removed from the field selection keywords
standardizing OpenFOAM on the first convention above.
2016-05-21 20:28:20 +01:00
Henry Weller
83bae2efd3 functionObjects: Renamed dictionary entry 'functionObjectLibs' -> 'libs'
This changes simplifies the specification of functionObjects in
controlDict and is consistent with the 'libs' option in controlDict to
load special solver libraries.

Support for the old 'functionObjectLibs' name is supported for backward compatibility.
2016-05-16 22:09:01 +01:00
Henry Weller
6164c2f262 Standardized the naming of functions which control the writing of fields etc.
to have the prefix 'write' rather than 'output'

So outputTime() -> writeTime()

but 'outputTime()' is still supported for backward-compatibility.

Also removed the redundant secondary-writing functionality from Time
which has been superseded by the 'writeRegisteredObject' functionObject.
2016-05-12 17:38:01 +01:00
Henry Weller
c983670c91 functionObjects: Changed options 'outputControl' -> 'writeControl' and 'outputInterval' -> 'writeInterval'
for consistency with the time controls in controlDict and to avoid
unnecessary confusion.  All code and tutorials have been updated.

The old names 'outputControl' and 'outputInterval' are but supported for
backward compatibility but deprecated.
2016-05-12 11:38:11 +01:00
Henry Weller
1b34231340 tutorials: Renamed .org -> .orig
See http://www.openfoam.org/mantisbt/view.php?id=2076
  - .org is the file extension for emacs org-mode as well
  - .orig is more to the point (.org isn't always recognized as "original")
  - .original is too long, although more consistent with the convention
    of source code file naming

Update script contributed by Bruno Santos
2016-04-30 21:53:50 +01:00
Henry Weller
350d03246e scripts: Reformat with consistent section separators 2016-02-15 18:30:24 +00:00
Henry Weller
fc2ce73723 Solvers: Added support for extrapolated pressure boundary conditions
The boundary conditions of HbyA are now constrained by the new "constrainHbyA"
function which applies the velocity boundary values for patches for which the
velocity cannot be modified by assignment and pressure extrapolation is
not specified via the new
"fixedFluxExtrapolatedPressureFvPatchScalarField".

The new function "constrainPressure" sets the pressure gradient
appropriately for "fixedFluxPressureFvPatchScalarField" and
"fixedFluxExtrapolatedPressureFvPatchScalarField" boundary conditions to
ensure the evaluated flux corresponds to the known velocity values at
the boundary.

The "fixedFluxPressureFvPatchScalarField" boundary condition operates
exactly as before, ensuring the correct flux at fixed-flux boundaries by
compensating for the body forces (gravity in particular) with the
pressure gradient.

The new "fixedFluxExtrapolatedPressureFvPatchScalarField" boundary
condition may be used for cases with or without body-forces to set the
pressure gradient to compensate not only for the body-force but also the
extrapolated "HbyA" which provides a second-order boundary condition for
pressure.  This is useful for a range a problems including impinging
flow, extrapolated inlet conditions with body-forces or for highly
viscous flows, pressure-induced separation etc.  To test this boundary
condition at walls in the motorBike tutorial case set

    lowerWall
    {
        type            fixedFluxExtrapolatedPressure;
    }

    motorBikeGroup
    {
        type            fixedFluxExtrapolatedPressure;
    }

Currently the new extrapolated pressure boundary condition is supported
for all incompressible and sub-sonic compressible solvers except those
providing implicit and tensorial porosity support.  The approach will be
extended to cover these solvers and options in the future.

Note: the extrapolated pressure boundary condition is experimental and
requires further testing to assess the range of applicability,
stability, accuracy etc.

Henry G. Weller
CFD Direct Ltd.
2016-02-13 17:48:26 +00:00
Henry Weller
daf44fda3d tutorials and templates: Updated wall BC for velocity to noSlip 2016-02-09 20:08:34 +00:00
Henry Weller
b3d47f0423 bin/tools/RunFunctions: runParallel now obtains the number of processors from numberOfSubdomains
in decomposeParDict.

This default number of processors may be overridden by the new "-np"
option to runParallel which must be specified before the application
name e.g.:

runParallel -np 4 pisoFoam
2016-01-27 14:19:25 +00:00
Henry Weller
d98136e122 tutorials: Removed unnecessary "boundary" files 2015-11-13 20:05:37 +00:00
Henry Weller
37cfc3ab46 tutorials: Removed unnecessary spaces between parentheses and values in vectors 2015-07-21 20:55:44 +01:00
Henry Weller
4c21f24a8c Input of dimensionedScalars: update read-construction of dimensionedScalar in applications
so that the specification of the name and dimensions are optional in property dictionaries.

Update tutorials so that the name of the dimensionedScalar property is
no longer duplicated but optional dimensions are still provided and are
checked on read.
2015-07-20 22:52:53 +01:00
Henry Weller
15198a34bd fluxRequired: Added setFluxRequired function to fvSchemes class
Added calls to setFluxRequired for p in all incompressible solvers which
avoids the need to add fluxRequired entries in fvSchemes dictionary.

Will add calls to setFluxRequired to the rest of the solvers.
2015-07-15 15:04:51 +01:00
Henry Weller
256be2641f Renamed pressureGradientExplicitSource to meanVelocityForce
as it is the applied the force necessary to maintain the specified mean velocity
2015-06-30 19:13:16 +01:00
Henry
3a004fda10 fvOptions: Separate options for all cells, cellSets and inter-region coupling
by introducing rational base-classes rather than using the hideous
'switch' statement.  Further rationalization of the cell-selection
mechanism will be implemented via an appropriate class hierarchy to
replace the remaining 'switch' statement.

Mesh-motion is currently handled very inefficiently for cellSets and not
at all for inter-region coupling.  The former will be improved when the
cell-selection classes are written and the latter by making the
meshToMesh class a MeshObject after it has been corrected for mapFields.
2015-05-31 16:38:01 +01:00
Henry
c3ee2348a6 MRF: Separate MRF from fvOptions
fvOptions does not have the appropriate structure to support MRF as it
is based on option selection by user-specified fields whereas MRF MUST
be applied to all velocity fields in the particular solver.  A
consequence of the particular design choices in fvOptions made it
difficult to support MRF for multiphase and it is easier to support
frame-related and field related options separately.

Currently the MRF functionality provided supports only rotations but
the structure will be generalized to support other frame motions
including linear acceleration, SRF rotation and 6DoF which will be
run-time selectable.
2015-05-29 23:35:43 +01:00
Henry
50ada7c994 blockMesh: Change default location of blockMeshDict from constant/polyMesh to system
For multi-region cases the default location of blockMeshDict is now system/<region name>

If the blockMeshDict is not found in system then the constant directory
is also checked providing backward-compatibility
2015-04-24 22:29:57 +01:00
Henry
5ecfb06398 tutorials: remove unnecessary under-relax fields entry 2015-02-22 16:52:21 +00:00
Henry
332c3cc37f Tutorials: change topoSetDicts to avoid duplicate names 2015-02-12 10:01:31 +00:00
Henry
fb30659b25 tutorials/incompressible/pimpleFoam/elipsekkLOmega: added non-orthogonal correctors to improve stability when running longer 2015-01-28 09:19:20 +00:00
Henry
d815440f52 tutorials/incompressible/pimpleFoam/elipsekkLOmega: Updated 2015-01-27 15:09:03 +00:00
Henry
04eb2428ff turbulenceModels/LES: Added WALE model
Changed the tutorials/incompressible/pimpleFoam/channel395 to demonstrate the WALE model
2015-01-23 09:17:33 +00:00
Henry
fbdc5f119a Added updated nut.gz file 2015-01-21 19:38:40 +00:00
Henry
2aec249647 Updated the whole of OpenFOAM to use the new templated TurbulenceModels library
The old separate incompressible and compressible libraries have been removed.

Most of the commonly used RANS and LES models have been upgraded to the
new framework but there are a few missing which will be added over the
next few days, in particular the realizable k-epsilon model.  Some of
the less common incompressible RANS models have been introduced into the
new library instantiated for incompressible flow only.  If they prove to
be generally useful they can be templated for compressible and
multiphase application.

The Spalart-Allmaras DDES and IDDES models have been thoroughly
debugged, removing serious errors concerning the use of S rather than
Omega.

The compressible instances of the models have been augmented by a simple
backward-compatible eddyDiffusivity model for thermal transport based on
alphat and alphaEff.  This will be replaced with a separate run-time
selectable thermal transport model framework in a few weeks.

For simplicity and ease of maintenance and further development the
turbulent transport and wall modeling is based on nut/nuEff rather than
mut/muEff for compressible models so that all forms of turbulence models
can use the same wall-functions and other BCs.

All turbulence model selection made in the constant/turbulenceProperties
dictionary with RAS and LES as sub-dictionaries rather than in separate
files which added huge complexity for multiphase.

All tutorials have been updated so study the changes and update your own
cases by comparison with similar cases provided.

Sorry for the inconvenience in the break in backward-compatibility but
this update to the turbulence modeling is an essential step in the
future of OpenFOAM to allow more models to be added and maintained for a
wider range of cases and physics.  Over the next weeks and months more
turbulence models will be added of single and multiphase flow, more
additional sub-models and further development and testing of existing
models.  I hope this brings benefits to all OpenFOAM users.

Henry G. Weller
2015-01-21 19:21:39 +00:00
Henry
69ff8aa4d2 wallDist: now a MeshObject cached and updated automatically with a run-time selected algorithm
When using models which require the wallDist e.g. kOmegaSST it will
request the method to be used from the wallDist sub-dictionary in
fvSchemes e.g.

wallDist
{
    method meshWave;
}

specifies the mesh-wave method as hard-coded in previous OpenFOAM versions.
2015-01-08 10:40:23 +00:00
Henry
41368addc9 Minor change to comment 2014-12-14 21:50:14 +00:00
OpenFOAM-admin
9fb26d59d3 GIT: Repo update 2014-12-11 08:35:10 +00:00
OpenFOAM-admin
fbb3ddf2c4 Updated for release 2.3.0 2014-02-17 10:21:46 +00:00
andy
73e876c7fb ENH: tutorial update - incompressible 2014-01-24 15:21:10 +00:00
andy
a97070c303 ENH: Added pimpleam pitzDaily test case 2013-12-12 12:57:19 +00:00
Henry
3f5eda25f0 symmetryPlane: add symmetryPlane as a special type of symmetry condition applied to a single plane
The standard/previous general symmetry type is now named symmetry
    both in class and lookup name for consistency.  The rigorous
    symmetryPlane type is needed for moving-mesh cases in which the
    motion it constrained by one or two planes.
2013-12-06 15:45:11 +00:00
andy
80a191e7dd BUG: Reinstated missing tutorial files 2013-11-20 16:23:12 +00:00
andy
cc8e6e0f7b ENH: Removed deleted files on tutorial clean-up 2013-11-20 11:52:04 +00:00
mattijs
1d679022bb ENH: TJunctionFan: new createBaffles syntax 2013-11-14 09:56:43 +00:00
Henry
51f085faa5 Rewrite of ddtPhiCorr - ddtCorr and density-weight HbyA on compressible solvers.
For DyM solvers phiAbs is replaced by Uf but this conversion is currently not complete
2013-09-09 12:41:20 +01:00
mattijs
22cf7ca39b BUG: TJunctionFan: incorrect createBafflesDict 2013-09-06 16:13:06 +01:00
mattijs
c4a65259ad GIT: boundary: remove usued file 2013-08-07 11:27:34 +01:00
Henry
14c3689fec epsilon/omega: ensure non-0 values are set on all boundaries 2013-06-20 16:33:15 +01:00
andy
b59ca3fc1c ENH: Removed unused entries in tutorial topoSetDict 2013-03-21 09:33:12 +00:00
mattijs
7bc63894a5 BUG: createPatchDict: new syntax 2013-02-12 14:21:59 +00:00
andy
985219c0ff ENH: Tutorial file updates 2013-01-09 14:05:53 +00:00
andy
d1bd734059 ENH: Updated tutorial files 2013-01-08 09:50:59 +00:00
andy
e2955dd6f7 ENH: Tutorial updates for run-time selectable sources 2012-12-18 09:30:47 +00:00
andy
a0eeb3f09d ENH: Removed unused entry from tutorial input dictionary 2012-12-10 10:16:49 +00:00
andy
87e9832689 ENH: Tutorial update for channel case using pressure gradient source 2012-12-10 10:15:07 +00:00
mattijs
c0e14130dc ENH: createBafflesDict: improved dictionary variable syntax 2012-12-05 16:27:04 +00:00
mattijs
026ce6aad4 ENH: TJunctionFan: new dictionary variable syntax 2012-12-05 15:28:38 +00:00
mattijs
5560076fac STYLE: Allrun: extraneous space 2012-12-05 14:53:28 +00:00
mattijs
38539cc27c ENH: TJunctionFan: rewrite to createBafflesDict 2012-12-04 12:12:51 +00:00