Commit Graph

63 Commits

Author SHA1 Message Date
Andrew Heather
9fbd612672 GIT: Initial state after latest Foundation merge 2016-09-20 14:49:08 +01:00
Henry Weller
b00e67ca37 foamChemistryReader: Added support for elements and specie composition
Based on a patch contributed by Francesco Contino, Tommaso Lucchini,
Gianluca D’Errico, Hervé Jeanmart, Nicolas Bourgeois and Stéphane
Backaert.
2016-07-12 09:05:00 +01:00
Henry Weller
bccf754d24 chemkinToFoam: Added support for converting elements and species composition
Based of patch contributed by Francesco Contino, Tommaso Lucchini,
Gianluca D’Errico, Hervé Jeanmart, Nicolas Bourgeois and Stéphane
Backaert.
2016-07-06 16:24:56 +01:00
Henry Weller
e4dc50dcb0 postProcessing: Replaced 'foamCalc' and the 'postCalc' utilities
with the more general and flexible 'postProcess' utility and '-postProcess' solver option

Rationale
---------

Both the 'postProcess' utility and '-postProcess' solver option use the
same extensive set of functionObjects available for data-processing
during the run avoiding the substantial code duplication necessary for
the 'foamCalc' and 'postCalc' utilities and simplifying maintenance.
Additionally consistency is guaranteed between solver data processing
and post-processing.

The functionObjects have been substantially re-written and generalized
to simplify development and encourage contribution.

Configuration
-------------

An extensive set of simple functionObject configuration files are
provided in

OpenFOAM-dev/etc/caseDicts/postProcessing

and more will be added in the future.  These can either be copied into
'<case>/system' directory and included into the 'controlDict.functions'
sub-dictionary or included directly from 'etc/caseDicts/postProcessing'
using the '#includeEtc' directive or the new and more convenient
'#includeFunc' directive which searches the
'<etc>/caseDicts/postProcessing' directories for the selected
functionObject, e.g.

functions
{
    #includeFunc Q
    #includeFunc Lambda2
}

'#includeFunc' first searches the '<case>/system' directory in case
there is a local configuration.

Description of #includeFunc
---------------------------

    Specify a functionObject dictionary file to include, expects the
    functionObject name to follow (without quotes).

    Search for functionObject dictionary file in
    user/group/shipped directories.
    The search scheme allows for version-specific and
    version-independent files using the following hierarchy:
    - \b user settings:
      - ~/.OpenFOAM/\<VERSION\>/caseDicts/postProcessing
      - ~/.OpenFOAM/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is set):
      - $WM_PROJECT_SITE/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_SITE/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is not set):
      - $WM_PROJECT_INST_DIR/site/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_INST_DIR/site/caseDicts/postProcessing
    - \b other (shipped) settings:
      - $WM_PROJECT_DIR/etc/caseDicts/postProcessing

    An example of the \c \#includeFunc directive:
    \verbatim
        #includeFunc <funcName>
    \endverbatim

postProcess
-----------

The 'postProcess' utility and '-postProcess' solver option provide the
same set of controls to execute functionObjects after the run either by
reading a specified set of fields to process in the case of
'postProcess' or by reading all fields and models required to start the
run in the case of '-postProcess' for each selected time:

postProcess -help

Usage: postProcess [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

 pimpleFoam -postProcess -help

Usage: pimpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

The functionObjects to execute may be specified on the command-line
using the '-func' option for a single functionObject or '-funcs' for a
list, e.g.

postProcess -func Q
postProcess -funcs '(div(U) div(phi))'

In the case of 'Q' the default field to process is 'U' which is
specified in and read from the configuration file but this may be
overridden thus:

postProcess -func 'Q(Ua)'

as is done in the example above to calculate the two forms of the divergence of
the velocity field.  Additional fields which the functionObjects may depend on
can be specified using the '-field' or '-fields' options.

The 'postProcess' utility can only be used to execute functionObjects which
process fields present in the time directories.  However, functionObjects which
depend on fields obtained from models, e.g. properties derived from turbulence
models can be executed using the '-postProcess' of the appropriate solver, e.g.

pisoFoam -postProcess -func PecletNo

or

sonicFoam -postProcess -func MachNo

In this case all required fields will have already been read so the '-field' or
'-fields' options are not be needed.

Henry G. Weller
CFD Direct Ltd.
2016-05-28 18:58:48 +01:00
Andrew Heather
efb39a8790 ENH: (further) Doxygen documentation updates for module support 2016-06-27 20:34:19 +01:00
andy
fd9d801e2d GIT: Initial commit after latest foundation merge 2016-04-25 11:40:48 +01:00
Henry Weller
56fa7c0906 Update code to use the simpler C++11 template syntax removing spaces between closing ">"s 2016-01-10 22:41:16 +00:00
Andrew Heather
f0c3e8d599 STYLE: Updated version to 'plus' 2015-12-22 23:14:17 +00:00
Andrew Heather
0e01c44129 GIT: Resolved conflict 2015-12-09 16:19:28 +00:00
Andrew Heather
8837a89237 STYLE: Updated links from openfoam.org to openfoam.com 2015-12-09 15:03:05 +00:00
Andrew Heather
8f1d043364 GIT: Resolved conflict 2015-12-09 09:32:38 +00:00
Andrew Heather
73dac8c7ee ENH: Updating utilities based on internal development line 2015-12-02 10:17:28 +00:00
Henry Weller
093b4aade6 chemkinReader: Add support for reading transport properties from dictionary
Note the dictionary is in OpenFOAM format not CHEMKIN.

Patch provided by Daniel Jasinski
Resolves feature request http://www.openfoam.org/mantisbt/view.php?id=1888
2015-11-20 18:55:36 +00:00
Henry Weller
e2ef006b91 applications: Update ...ErrorIn -> ...ErrorInFunction
Avoids the clutter and maintenance effort associated with providing the
function signature string.
2015-11-10 17:53:31 +00:00
Henry
945c4c3d18 fluidThermo: Add compressibleTransportModel as base-class
Needed to create generic compressible turbulence model library
2015-02-17 17:25:26 +00:00
OpenFOAM-admin
9fb26d59d3 GIT: Repo update 2014-12-11 08:35:10 +00:00
OpenFOAM-admin
fbb3ddf2c4 Updated for release 2.3.0 2014-02-17 10:21:46 +00:00
andy
951c8436aa ENH: Applying Gijs' patch: Update header documentation for utilities 2013-02-21 10:54:34 +00:00
andy
17e2039920 ENH: Added option to read new chemkin format 2013-02-01 16:38:52 +00:00
Henry
58a7436506 Update headers 2013-01-17 09:49:26 +00:00
Henry
9a5c2da655 Thermodynamics: Update to latest thermo database file 2013-01-17 09:45:14 +00:00
Henry
14153d57db Thermodynamics: template the equations of state on Specie
This will allow alternative methods of storing mixture information for e.g. complex transport modelling
2012-09-24 17:57:12 +01:00
Henry
f1bfeba127 Thermodynamics: rename specieThermo -> species::thermo and create the species namespace
Also remove the "<thermo" part of the names of thermodynamics packages
2012-09-24 15:37:36 +01:00
Henry
830c0ef382 Thermodynamyics: rename basicThermo -> fluidThermo and veryBasicThermo -> basicThermo 2012-08-23 14:13:13 +01:00
Henry
09a54cda4a thermophysical utilities: Added environmental pressure to example controlDicts 2012-06-06 11:24:00 +01:00
Henry
18bfaf18a5 thermophysical utilities: Add environmental pressure as additional parameter 2012-06-06 11:21:43 +01:00
Henry
2d2787bd8c thermodynamics: Added pressure as an addition argument to all primitive thermodynamic functions
Added additional layer of templating to reactingMixture to support specie functions in a generic manner.
2012-06-05 19:51:57 +01:00
Henry
dead8ec098 Thermodynamics: Rationalization
At the specie level:
    hs = sensible enthalpy
    ha = absolute (what was total) enthalpy
    es = sensibly internal energy
    ea = absolute (what was total) internal energy

At top-level
    Rename total enthalpy h -> ha
    Rename sensible enthalpy hs -> h

Combined h, hs, e and es thermo packages into a single structure.

Thermo packages now provide "he" function which may return either enthalpy or
internal energy, sensible or absolute according to the run-time selected form

alphaEff now returns the effective diffusivity for the particular energy which
the thermodynamics package is selected to solve for.
2012-05-30 15:21:32 +01:00
Henry
63da3e9afc Thermodynamics: Rationalization
At the specie level:
    hs = sensible enthalpy
    ha = absolute (what was total) enthalpy
    es = sensibly internal energy
    ea = absolute (what was total) internal energy

At top-level
    Rename total enthalpy h -> ha
    Rename sensible enthalpy hs -> h

Combined h, hs, e and es thermo packages into a single structure.

Thermo packages now provide "he" function which may return either enthalpy or
internal energy, sensible or absolute according to the run-time selected form

alphaEff now returns the effective diffusivity for the particular energy which
the thermodynamics package is selected to solve for.
2012-05-30 15:19:38 +01:00
andy
ecd1dd8144 ENH: Updated chemkinToFoam utility to reflect changes in chemistry reader constructors 2011-10-27 15:05:35 +01:00
Henry
c2dd153a14 Copyright transfered to the OpenFOAM Foundation 2011-08-14 12:17:30 +01:00
OpenFOAM-admin
c720299876 ENH: Reverted back to version dev 2011-06-17 10:08:20 +01:00
mattijs
4f47ff0219 STYLE: dictionaries: update version number 2011-06-10 17:22:56 +01:00
mattijs
acd7554ae0 STYLE: dictionaries in $FOAM_UTILITIES: header 2011-04-06 19:15:15 +01:00
andy
eaef8d482b STYLE: Updated 1991 start copyright year to 2004 2011-01-14 16:08:00 +00:00
andy
099cc39e2e Revert "STYLE: 2011 copyright date."
This reverts commit b18f6cc1ce.
2011-01-05 18:24:29 +00:00
graham
b18f6cc1ce STYLE: 2011 copyright date. 2011-01-05 11:14:26 +00:00
andy
81a651d943 ENH: Updated chemkinToFoam utility to make use of new dict output 2010-10-13 17:58:09 +01:00
graham
012494fdb5 STYLE: Fixing code style requirements for all apps.
Exception: applyWallFunctionBoundaryConditions.C cannot split #include
directives.
2010-07-27 15:27:05 +01:00
graham
67136c25ee STYLE: Remove tabs. 2010-07-27 12:24:27 +01:00
henry
ccfb6e32a6 Corrected headers. 2010-06-23 16:54:54 +01:00
andy
28b1a9e2c6 Merge branch 'olesenm' 2010-06-03 10:25:03 +01:00
mattijs
c51a2b0f63 ENH: have MUST_READ_IF_MODIFIED on IOdictionary construction 2010-06-02 09:48:07 +01:00
Mark Olesen
895a077cb1 STYLE: fixup some dictionary headers 2010-05-18 11:38:07 +02:00
Mark Olesen
35afeb9b18 STYLE: remove superfluous uses of argList::validArgs.clear()
- a holdover from the old <root> <case> days
2010-05-03 08:38:39 +02:00
Mark Olesen
5cfa97624e STYLE: more consistent New methods, use unregistered IOobject where appropriate 2010-04-20 17:13:35 +02:00
Mark Olesen
42807ddd7e STYLE: fix worst spacing violations for 'os <<' constructions
- accept some violations of the coding guidelines though
- perhaps adding a style exception would be simpler.
2010-04-13 17:45:49 +02:00
Mark Olesen
a50f01b079 STYLE: use forAllIter, forAllConstIter instead of long-hand version
STYLE: use 'forAll(' NOT 'forAll (', as per coding guide
2010-04-12 11:18:38 +02:00
Mark Olesen
d29c438657 STYLE: use url for FSF license instead of postal address, switch to GPL v3 2010-03-29 14:07:56 +02:00
Mark Olesen
d857d671ac STYLE: use new argList argRead() method and operator[] for cleaner code.
- deprecate argList::additionalArgs() method and remove uses of it
2010-02-16 17:57:49 +01:00