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1434 Commits

Author SHA1 Message Date
Andrew Heather
efb39a8790 ENH: (further) Doxygen documentation updates for module support 2016-06-27 20:34:19 +01:00
Andrew Heather
d13b2aac5d STYLE: renamed autoRefineMesh->snappyRefineMesh 2016-06-27 19:32:13 +01:00
Andrew Heather
a8b0552338 Merge branch 'feature-profiling' into 'develop' 
high-level profiling/timing functionality



See merge request !47
 2016-06-22 14:46:50 +01:00
Mark Olesen
37bf28c249 STYLE: rename Profiling -> profiling 2016-06-20 21:20:31 +02:00
Mark Olesen
e86d3f2e0e ENH: add preliminary profiling items into snappyHexMesh 
- needs more refinement, but provides the general idea.
 2016-06-18 01:00:55 +02:00
Andrew Heather
9e84deeb09 STYLE: Updated template code 2016-06-17 14:11:59 +01:00
mattijs
c4b5880f9c BUG: cyclicACMI: make conservative. Remove faceAreas0 2016-06-06 14:30:00 +01:00
mattijs
42519734c7 ENH: snappyHexMeshDict: improved comment 2016-06-01 12:52:09 +01:00
Andrew Heather
b9313ef2fe ENH: Consistency updates after Foundation merge and code tidying 2016-04-25 16:46:56 +01:00
andy
fd9d801e2d GIT: Initial commit after latest foundation merge 2016-04-25 11:40:48 +01:00
Henry Weller
5f13806591 Updated headers 2016-04-21 21:07:28 +01:00
Henry Weller
0aaf154100 utilities/mesh/manipulation: Rationalized "End" message 2016-04-21 21:06:45 +01:00
Henry Weller
d57464a99d transformPoints: Added "End" message 
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2059
 2016-04-21 21:05:47 +01:00
Henry Weller
8c6fa81eba vector::zero -> Zero 2016-04-16 18:34:41 +01:00
Henry Weller
a9b8bb13e0 applications/.*/Allwmake: Updated to support "stop on 1st error" 
Patch contributed by Bruno Santos
Resolved bug-report http://www.openfoam.org/mantisbt/view.php?id=2042
 2016-04-04 09:03:40 +01:00
Henry Weller
88bd912374 Pstream: optimisation of data exchange 
Contributed by Mattijs Janssens.

1. Any non-blocking data exchange needs to know in advance the sizes to
   receive so it can size the buffer.  For "halo" exchanges this is not
   a problem since the sizes are known in advance but or all other data
   exchanges these sizes need to be exchanged in advance.

   This was previously done by having all processors send the sizes of data to
   send to the master and send it back such that all processors
   - had the same information
   - all could work out who was sending what to where and hence what needed to
     be received.

   This is now changed such that we only send the size to the
   destination processor (instead of to all as previously). This means
   that
   - the list of sizes to send is now of size nProcs v.s. nProcs*nProcs before
   - we cut out the route to the master and back by using a native MPI
     call

   It causes a small change to the API of exchange and PstreamBuffers -
   they now return the sizes of the local buffers only (a labelList) and
   not the sizes of the buffers on all processors (labelListList)

2. Reversing the order of the way in which the sending is done when
   scattering information from the master processor to the other
   processors. This is done in a tree like fashion. Each processor has a
   set of processors to receive from/ send to. When receiving it will
   first receive from the processors with the least amount of
   sub-processors (i.e. the ones which return first). When sending it
   needs to do the opposite: start sending to the processor with the
   most amount of sub-tree since this is the critical path.
 2016-04-02 18:32:11 +01:00
mattijs
142920de9c ENH: snappyHexMeshDict: added documentation for keepPatches 2016-03-23 15:13:03 +00:00
Henry Weller
730f89dc9d Use Zero rather than pTraits<Type>::zero unless a static typed '0' is required 2016-03-22 17:46:52 +00:00
Henry Weller
cb65ba71d7 Made all template declarations consistent using 'class' rather than 'typename' 2016-03-22 15:02:55 +00:00
Henry Weller
ea6eac35a6 etc/config.sh/CGAL: updated 
Patch contributed by Bruno Santos:
 - "etc/config.sh/CGAL":
   - Indented the contents of the recently added if block.
   - Added comment about using system versions.
   - Library paths are now only added if the respective version is not "boost-system" and "cgal-system".

 - "src/renumber/Allwmake":
   It now relies on the previous file to get the version for
   Boost (the same way as in "makeCGAL"). This is so that it will also
   build "SloanRenumber" if "boost_version" is set to "boost-system".

 - "applications/utilities/mesh/generation/Allwmake":
   It now also relies on the script "config.sh/CGAL" to get the
   version for CGAL. If "cgal_version" is set to "cgal-system", it
   will now also build "foamy*Mesh" utilities and respective
   libraries.

Resolves report http://www.openfoam.org/mantisbt/view.php?id=1232
 2016-03-22 07:58:38 +00:00
Henry Weller
fa5867137d transformPoints, surfaceTransformPoints: Updated quaternion construction from Euler-angles 
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2024
 2016-03-14 16:40:35 +00:00
mattijs
ffa7dc7d6b ENH: IOWarningIn: use new ..InFunction macros 2016-03-09 14:36:25 +00:00
Henry Weller
4bc77e6aff Sprucing up the tutorials folder and adding -dict to "collapseEdges" 
Patch provided by Bruno Santos
Resolves patch application request http://www.openfoam.org/mantisbt/view.php?id=2015
 2016-03-06 19:06:44 +00:00
mattijs
c35544f9cb Merge remote-tracking branch 'origin/develop' into feature-shared-file 2016-03-02 09:54:15 +00:00
Henry Weller
2bbc844ea0 Rationalize the autoMesh library: autoHexMesh -> snappyHexMesh 
autoRefine -> snappyRefine
autoLayer -> snappyLayer
autoSnap -> snappySnap
 2016-03-01 16:21:31 +00:00
Henry Weller
eb5d349242 Rationalize the autoMesh library: autoMesh -> snappyHexMesh 2016-03-01 16:01:42 +00:00
Henry Weller
5db3116a74 src/OpenFOAM: Moved function documentation comments into .H files and removed duplicates 2016-03-01 12:29:01 +00:00
Henry Weller
7ba41e0095 Removed duplicate, inconsistent and spurious comments in .C files 2016-02-29 18:33:54 +00:00
Henry Weller
95d146ecdf Rationalized the indentation of C-preprocessor directives 2016-02-29 15:42:03 +00:00
Henry Weller
cd852be3da OpenFOAM: Updated all libraries, solvers and utilities to use the new const-safe tmp 
The deprecated non-const tmp functionality is now on the compiler switch
NON_CONST_TMP which can be enabled by adding -DNON_CONST_TMP to EXE_INC
in the Make/options file.  However, it is recommended to upgrade all
code to the new safer tmp by using the '.ref()' member function rather
than the non-const '()' dereference operator when non-const access to
the temporary object is required.

Please report any problems on Mantis.

Henry G. Weller
CFD Direct.
 2016-02-26 17:31:28 +00:00
Henry Weller
5a74397fe4 refineMesh: Added customizable direction fields to multiDirRefinement 
Contribution provided by Bruno Santos
Resolves feature request http://www.openfoam.org/mantisbt/view.php?id=2004
 2016-02-22 17:06:18 +00:00
Henry Weller
350d03246e scripts: Reformat with consistent section separators 2016-02-15 18:30:24 +00:00
Henry Weller
34d2890952 foamyHexMeshBackgroundMesh: Updated to compile 2016-02-03 21:24:38 +00:00
Henry Weller
472fa0674a Update headers 2016-02-02 20:09:58 +00:00
Henry Weller
8b9698ad43 processorPolyPatch, processorCyclicPolyPatch: Rationalized the construction of the patch name 
This change ensures that these patches are named consistently so that
they can be looked-up as required in e.g. patchMeanVelocityForce
 2016-02-02 20:07:16 +00:00
mattijs
21bc7a0c39 ENH: utilities: small merge of dev functionality 2016-01-28 15:36:42 +00:00
mattijs
9e3ce4ec7f Merge branch 'master' of develop.openfoam.com:Development/OpenFOAM-plus into feature-shared-file 
Conflicts:
	applications/utilities/mesh/advanced/refinementLevel/refinementLevel.C
	applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/initialPointsMethod/pointFile/pointFile.C
	applications/utilities/miscellaneous/foamHelp/helpTypes/helpBoundary/helpBoundary.C
	applications/utilities/postProcessing/graphics/PV3Readers/PV3FoamReader/vtkPV3Foam/vtkPV3FoamUpdateInfo.C
	applications/utilities/postProcessing/graphics/PV4Readers/PV4FoamReader/vtkPV4Foam/vtkPV4FoamUpdateInfo.C
	applications/utilities/postProcessing/turbulence/createTurbulenceFields/createTurbulenceFields.C
	applications/utilities/postProcessing/velocityField/Co/Co.C
	applications/utilities/postProcessing/velocityField/Pe/Pe.C
	applications/utilities/preProcessing/applyBoundaryLayer/applyBoundaryLayer.C
	applications/utilities/preProcessing/changeDictionary/changeDictionary.C
	applications/utilities/preProcessing/setFields/setFields.C
	applications/utilities/surface/surfaceMeshConvert/surfaceMeshConvert.C
	applications/utilities/surface/surfaceMeshExport/surfaceMeshExport.C
	applications/utilities/surface/surfaceMeshImport/surfaceMeshImport.C
	applications/utilities/surface/surfaceRedistributePar/surfaceRedistributePar.C
	src/OpenFOAM/db/IOobject/IOobject.C
	src/OpenFOAM/db/IOobjects/CompactIOList/CompactIOList.C
	src/OpenFOAM/db/IOobjects/IOField/IOField.C
	src/OpenFOAM/db/IOobjects/IOList/IOList.C
	src/OpenFOAM/db/IOobjects/IOPtrList/IOPtrList.C
	src/OpenFOAM/db/IOobjects/IOdictionary/IOdictionary.C
	src/OpenFOAM/db/Time/findInstance.C
	src/OpenFOAM/db/regIOobject/regIOobject.C
	src/OpenFOAM/db/regIOobject/regIOobjectI.H
	src/OpenFOAM/db/regIOobject/regIOobjectRead.C
	src/OpenFOAM/db/regIOobject/regIOobjectWrite.C
	src/OpenFOAM/meshes/polyMesh/mapPolyMesh/mapDistribute/IOmapDistribute.C
	src/OpenFOAM/meshes/polyMesh/polyBoundaryMesh/polyBoundaryMesh.C
	src/OpenFOAM/meshes/polyMesh/zones/ZoneMesh/ZoneMesh.C
	src/dynamicMesh/fvMeshDistribute/IOmapDistributePolyMesh.C
	src/dynamicMesh/motionSolver/componentDisplacement/componentDisplacementMotionSolver.C
	src/dynamicMesh/polyTopoChange/polyTopoChange/hexRef8/hexRef8Data.C
	src/dynamicMesh/polyTopoChange/polyTopoChange/hexRef8/refinementHistory.C
	src/dynamicMesh/polyTopoChange/polyTopoChanger/polyTopoChanger.C
	src/edgeMesh/edgeMeshFormats/edgeMesh/edgeMeshFormat.C
	src/edgeMesh/extendedEdgeMesh/extendedEdgeMeshFormats/extendedEdgeMeshFormat/extendedEdgeMeshFormat.C
	src/edgeMesh/extendedEdgeMesh/extendedFeatureEdgeMesh/extendedFeatureEdgeMesh.C
	src/fvMotionSolver/fvMotionSolvers/displacement/interpolation/displacementInterpolationMotionSolver.C
	src/fvMotionSolver/pointPatchFields/derived/uniformInterpolatedDisplacement/uniformInterpolatedDisplacementPointPatchVectorField.C
	src/lagrangian/basic/Cloud/CloudIO.C
	src/meshTools/sets/cellSources/fieldToCell/fieldToCell.C
	src/postProcessing/foamCalcFunctions/basic/addSubtract/addSubtract.C
	src/postProcessing/functionObjects/field/fieldCoordinateSystemTransform/fieldCoordinateSystemTransformTemplates.C
	src/postProcessing/functionObjects/field/readFields/readFieldsTemplates.C
	src/thermophysicalModels/radiation/radiationModels/fvDOM/radiativeIntensityRay/radiativeIntensityRay.C
	src/triSurface/triSurface/surfacePatch/surfacePatchIOList.C
 2016-01-25 16:29:04 +00:00
mattijs
e424059208 ENH: glboal file handling: initial commit 
Moved file path handling to regIOobject and made it type specific so
now every object can have its own rules. Examples:
- faceZones are now processor local (and don't search up anymore)
- timeStampMaster is now no longer hardcoded inside IOdictionary
  (e.g. uniformDimensionedFields support it as well)
- the distributedTriSurfaceMesh is properly processor-local; no need
  for fileModificationChecking manipulation.
 2016-01-25 13:03:15 +00:00
Henry Weller
5728c1f173 Info -> InfoInFunction 2016-01-19 21:58:11 +00:00
Henry Weller
1896599d8b Add support for flex-2.6 
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1974
 2016-01-18 19:44:38 +00:00
Henry Weller
59b578f155 Provide consistency in assignment operators 
Always return void to avoid various bugs associated with automatic
type conversion.

Resolves request http://openfoam.org/mantisbt/view.php?id=1973
 2016-01-17 18:56:28 +00:00
Henry Weller
56fa7c0906 Update code to use the simpler C++11 template syntax removing spaces between closing ">"s 2016-01-10 22:41:16 +00:00
Henry Weller
4eba393fe1 Update code to use the simpler C++11 template syntax 2016-01-10 19:20:16 +00:00
Henry Weller
75cf86b769 Correct formatting: "forAll (" -> "forAll(" 
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1967
 2016-01-09 23:10:16 +00:00
Andrew Heather
f0c3e8d599 STYLE: Updated version to 'plus' 2015-12-22 23:14:17 +00:00
Andrew Heather
04752147c8 GIT: Resolved conflict on merge from upstream 2015-12-22 16:49:44 +00:00
Mattijs Janssens
17617d87da Merge branch 'feature-copyright' into 'develop' 
ENH: copyright: make consistent with OpenFOAM-history



See merge request !29
 2015-12-19 14:25:48 +00:00
mattijs
8864223aed ENH: copyright: make consistent with OpenFOAM-history 2015-12-19 14:22:30 +00:00
mattijs
b90cd04ce7 END: splitMeshRegions: consistent exit output. 
Fixes #35
 2015-12-18 10:16:50 +00:00
mattijs
4a8abe78f5 Merge branch 'feature_shm_zoning' into develop 
Conflicts:
	src/mesh/autoMesh/autoHexMesh/autoHexMeshDriver/refinementParameters/refinementParameters.C
	src/mesh/autoMesh/autoHexMesh/meshRefinement/meshRefinement.H
	src/mesh/autoMesh/autoHexMesh/meshRefinement/meshRefinementBaffles.C
 2015-12-15 20:10:10 +00:00