Commit Graph

2065 Commits

Author SHA1 Message Date
Mark Olesen
d31f351c15 ENH: blockMesh enhancements
- support non-uniform scaling, prescaling and cartesian coordinate
  transformations.

  Eg, stretch in one direction and then rotate
  ```
  prescale  (1.5 1 1);
  transform
  {
      origin   (0 0 0);
      rotation
      {
          type  axisAngle;
          axis  (0 0 1);
          angle 45;
      }
  }
  ```

- support "transformed" versions of blockMesh vertices, topology.
  With the additional of transformations etc, a simplistic application
  of a single scale parameter is no longer sufficient.

    new:  blMesh.vertices(true);
    old:  blMesh.vertices() * blMesh.scaleFactor();

    new:  blMesh.topology(true);
    old:  N/A

- add individual edge access for blockDescriptor.
  Saves copying and duplicate calculations.

- handle '(block face)' specification for curved faces,
  which is ok for external block faces, but likely somewhat
  questionable if used for internal block faces.
2021-07-28 13:14:44 +02:00
Mark Olesen
0c15f773e0 STYLE: remove/replace unneeded SortableList 2021-07-15 16:47:27 +02:00
Mark Olesen
620fe96c02 ENH: multi-region support for rotateMesh (#2072) 2021-06-11 17:18:35 +02:00
Mark Olesen
5d9e42cb70 ENH: multi-region support for transformPoints (#2080) 2021-05-30 21:33:20 +02:00
Mark Olesen
f2d634c49f ENH: cellShape::reset() - simplifies modification of existing shapes 2021-05-30 21:02:59 +02:00
mattijs
9a3d27e3df ENH: blockMesh: enable named blocks and mergePatchPairs. Fixes #2088. 2021-05-20 16:13:52 +01:00
Mark Olesen
2dbabb242b ENH: namedDictionary for managing keyword/dictionary combinations
- reworked from the openfoam.org wordAndDictionary version.

Allows, for example, named entries in topoSet.
2021-05-19 17:13:24 +02:00
Mattijs Janssens
5120c51ba1 ENH: splitMeshRegions: combine cellZones. See #2046 2021-05-17 10:53:40 +00:00
Mark Olesen
2a438385a3 STYLE: make polyMesh constructor explicit
- use polyMesh::defaultRegion instead of fvMesh::defaultRegion and
  others via static inheritance. (92 vs ~25 occurrences)
2021-05-12 11:24:57 +02:00
mattijs
1177dbd111 ENH: checkMesh: -allRegions. See #2072 2021-05-07 09:46:33 +02:00
Mark Olesen
2b7b3700c2 ENH: replace keyType with wordRe for matching selectors.
- The keyType is primarily used within dictionary reading, whereas
  wordRe and wordRes are used for selectors in code.
  Unifying on wordRe and wordRes reduces the number matching options.
2021-04-19 16:33:42 +00:00
Mark Olesen
95cd8ee75c ENH: improve hashing overloads of string-types and HashTable/HashSet
- additional dummy template parameter to assist with supporting
  derived classes. Currently just used for string types, but can be
  extended.

- provide hash specialization for various integer types.
  Removes the need for any forwarding.

- change default hasher for HashSet/HashTable from 'string::hash'
  to `Hash<Key>`. This avoids questionable hashing calls and/or
  avoids compiler resolution problems.

  For example,
  HashSet<label>::hasher and labelHashSet::hasher now both properly
  map to Hash<label> whereas previously HashSet<label> would have
  persistently mapped to string::hash, which was incorrect.

- standardize internal hashing functors.

  Functor name is 'hasher', as per STL set/map and the OpenFOAM
  HashSet/HashTable definitions.

  Older code had a local templated name, which added unnecessary
  clutter and the template parameter was always defaulted.
  For example,

      Old:  `FixedList<label, 3>::Hash<>()`
      New:  `FixedList<label, 3>::hasher()`
      Unchanged:  `labelHashSet::hasher()`

  Existing `Hash<>` functor namings are still supported,
  but deprecated.

- define hasher and Hash specialization for bitSet and PackedList

- add symmetric hasher for 'face'.
  Starts with lowest vertex value and walks in the direction
  of the next lowest value. This ensures that the hash code is
  independent of face orientation and face rotation.

NB:
  - some of keys for multiphase handling (eg, phasePairKey)
    still use yet another function naming: `hash` and `symmHash`.
    This will be targeted for alignment in the future.
2021-04-19 16:33:42 +00:00
Mark Olesen
b060378dca ENH: improve consistency of fileName handling windows/non-windows (#2057)
- wrap command-line retrieval of fileName with an implicit validate.

  Instead of this:
      fileName input(args[1]);
      fileName other(args["someopt"]);

  Now use this:
      auto input = args.get<fileName>(1);
      auto other = args.get<fileName>("someopt");

  which adds a fileName::validate on the inputs

  Because of how it is implemented, it will automatically also apply
  to argList getOrDefault<fileName>, readIfPresent<fileName> etc.

- adjust fileName::validate and clean to handle backslash conversion.
  This makes it easier to ensure that path names arising from MS-Windows
  are consistently handled internally.

- dictionarySearch: now check for initial '/' directly instead of
  relying on fileName isAbsolute(), which now does more things

BREAKING: remove fileName::clean() const method

- relying on const/non-const to control the behaviour (inplace change
  or return a copy) is too fragile and the const version was
  almost never used.

  Replace:
      fileName sanitized = constPath.clean();

  With:
      fileName sanitized(constPath);
      sanitized.clean());

STYLE: test empty() instead of comparing with fileName::null
2021-04-19 16:33:42 +00:00
Mark Olesen
cdbc3e2de6 ENH: List/DynamicList appendUniq() method
- affords some code reduction.

STYLE: use HashSet insert() without found() check in more places
2021-04-19 16:33:42 +00:00
mattijs
2dbdac109e STYLE: modifyMesh: left-over debug printing 2021-03-31 15:55:48 +01:00
mattijs
c9c85d9afe BUG: primitiveMesh: incorrect uncached edgeFaces. Fixes #2047.
It was only looking for faces that were used in both
endpoints but not actually checking whether they were indeed
an edge (== consecutive vertex) in all faces. So if one
face had an additional crossing edge and another didn't it
would find more edgeFaces than the proper
'primitiveMesh::edgeFaces()' routine.
This occasionally happened inside snappyHexMesh
(e.g. motorBike tutorial)
2021-03-31 15:32:14 +01:00
Mark Olesen
9a2a22a03a ENH: provide setter methods for IOobject read/write options etc.
- simplifies local toggling.

- centralize fileModification static variables into IOobject.
  They were previously scattered between IOobject and regIOobject
2021-03-17 15:10:00 +01:00
mattijs
d10769f5a9 ENH: checkMesh: write surface fields. Fixes #2023 2021-03-10 18:46:40 +00:00
Mark Olesen
fa645c2dac ENH: noexcept size_bytes() method for lists
- for use when the is_contiguous check has already been done outside
  the loop. Naming as per std::span.

STYLE: use data/cdata instead of begin

ENH: replace random_shuffle with shuffle, fix OSX int64 ambiguity
2021-03-09 09:49:31 +01:00
Mark Olesen
51cd7ceecb ENH: improvements for token methods
- direct check of punctuation.
  For example,

      while (!tok.isPunctuation(token::BEGIN_LIST)) ..

  instead of

  while (!(tok.isPunctuation() && tok.pToken() == token::BEGIN_LIST)) ..

  Using direct comparison (tok != token::BEGIN_LIST) can be fragile
  when comparing int values:

      int c = readChar(is);
      while (tok != c) ..  // Danger, uses LABEL comparison!

- direct check of word.
  For example,

      if (tok.isWord("uniform")) ..

  instead of

      if (tok.isWord() && tok.wordToken() == "uniform") ..

- make token lineNumber() a setter method

ENH: adjust internal compound method empty() -> moved()

- support named compound tokens

STYLE: setter method for stream indentation
2021-03-09 09:23:41 +01:00
Mark Olesen
496792f328 COMP: use single-parameter fvMeshDistribute 2021-03-08 15:34:39 +01:00
mattijs
ba9e573812 ENH: redistributePar: single-step. See #1211
- single-step for reconstructParMesh
- no point merging for redistributePar -reconstruct
2021-03-08 11:01:57 +00:00
Mark Olesen
f8a0677a66 ENH: replace base implementation of Foam::Swap with std::swap
- eliminates a potentially invalid code branch.
  Since it essentially had the same internals as std::swap anyhow,
  make that more evident.

ENH: use std::swap for basic types

- makes it clearer that they do not rely on any special semantics
2021-02-16 14:30:36 +01:00
Mark Olesen
e71bf4445a GIT: fix edit errors 2021-02-10 12:43:07 +01:00
Mark Olesen
6cdf89dced ENH: use concise forms for walking processor and cyclic boundaries 2021-02-09 17:57:49 +01:00
Mark Olesen
902f09b688 ENH: IOobject for header generation, preserve output format in datToFoam 2021-01-26 09:42:26 +01:00
mattijs
a2bc1fd3a6 BUG: extrudeMesh: revert previous fix. see #1964
The polyMesh construct-from-components will now ignore
the readOpt for the supplied primitives as before.
This again re-allows READ_IF_PRESENT for fv* in
combination with supplied primitives.
2020-12-21 17:25:56 +00:00
Mattijs Janssens
6d6c204745 BUG: extrudeMesh - partial fix for incorrect behaviour - see #1964
Changed IO flag so that new mesh is created
- was using old 'faces', 'owner' etc but then used the new patch starts

Corrected logic for contMap in polyTopoChange
2020-12-18 17:42:20 +00:00
Mark Olesen
cf3d983b80 ENH: add treatment for PDRblockMesh outer region expansions (#1906)
// Treatment of the outer region
   outer
   {
       type        sphere;
       onGround    true;
       expansion   relative;

       ratios      1.1;

       size        3;
       nCells      10;
   }
2020-12-11 20:24:25 +00:00
Mattijs Janssens
46dbfabd9d ENH: primitiveMesh: make geometry calculation runtime selectable
This adds a 'geometry' scheme section to the system/fvSchemes:

geometry
{
    type            highAspectRatio;
}

These 'fvGeometryMethod's are used to calculate
- deltaCoeffs
- nonOrthoCoeffs
etc and can even modify the basic face/cellCentres calculation.
2020-12-11 10:31:34 +00:00
Mark Olesen
be783632f2 ENH: isoSurfaceParams
- bundles selection and control parameters used when creating
  iso-surfaces. This simplifies selection and specification

- drop old compatibility handling of "cell" as a bool

- harmonize filter/regularisation flags for iso-surface

- for dictionary input, accept "isoMethod" and "isoAlgorithm" as being
  synonymous. Using "isoMethod" is less subject to typing errors.
2020-12-08 13:31:22 +01:00
Mark Olesen
b966b7cd4b ENH: static test methods for matching simple cell shapes
- (tet, pyr, hex) can be identified from their number of faces
  and vertices. For these common shapes can use static `test()`
  method instead of the virtual isA() method.

  This is much cheaper for calling on an individual basis since
  it avoids the overhead of constructing an object.

ENH: tetCell edge/reverseEdge (already had tetEdge)
2020-12-08 11:58:27 +01:00
Mark Olesen
b4eb214d56 BUG: transformPoints flagged zero or negative scaling as an error
- additional check was introduced by 51b2490258, but scaling with
  zero is useful for flattening a mesh
2020-11-26 01:04:55 +01:00
Mark Olesen
52c6642a4c Merge remote-tracking branch 'origin/master' into develop 2020-11-25 21:30:49 +01:00
Mark Olesen
7349b97ecc STYLE: use labelRange for identity 2020-11-25 19:53:02 +01:00
mattijs
ae49b51182 ENH: improve offsets handling in extrudeToRegionMesh (#1933)
- non-uniform offsets are generated due to truncation errors,
  which can lead to problems later on (e.g. redistributePar).

  Detect if the offsets are close to being uniform.
2020-11-25 19:53:02 +01:00
Mark Olesen
07bbae0c55 STYLE: use brace constructors for Foam::zero and Foam::one
- makes it clearer that these are constructors and not function calls
2020-11-19 16:57:45 +01:00
Mark Olesen
6dd2cc808e CONFIG: provisional cuda rule. Update naming for CGAL rules 2020-11-17 21:29:07 +01:00
Mark Olesen
bed1305d96 BUG: extraneous brackets after Fluent cell types (fixes #1872)
ENH: limit output to 25 cell types per line for readability

- makes it easier to trace potential format errors etc

STYLE: downgrade warning about polyhedrals to a simple info message

- can assume that polyhedral support is widespread enough to not
  warrant a warning.
2020-10-29 11:21:39 +01:00
Mark Olesen
f959c8eb36 ENH: generate local orientation vectors for blockMesh VTK output (#1903)
- can help when designing/debugging blockMesh layouts

- propagate low-level cellModel methods face() and edge() to cellShape

STYLE: relocate blockMesh OBJ output to application only

- remove blockTopology files in cleanCase function

- improve code consistency in top-level blockMesh, PDRblockMesh
  generation.
2020-10-28 16:04:12 +01:00
Mark Olesen
9eb73a92e2 TUT: fix use of "constant/triSurface" etc (#1887)
- use bracketed syntax (eg, "<constant>/triSurface") instead for
  implicit case resolution.
2020-10-28 16:04:12 +01:00
Mark Olesen
51b2490258 ENH: additional options for transformPoints and surfaceRefineRedGreen
- add -recentre option to shift points according to the bounding box
  centre before performing other operations

- add -auto-origin to use the bounding box centre as the origin for
  rotations. Has lower priority than the -origin option.

- surfaceTransformPoints now has distinct -read-scale, -write-scale
  options (as per surfaceMeshConvert). Silently accepts -scale as
  equivalent to -write-scale, for backwards compatibility and
  similarity with transformPoints

- add -steps option for surfaceRefineRedGreen for successive
  refinement
2020-10-22 14:59:12 +02:00
Mark Olesen
132ae101f6 COMP: avoid autoPtr copy assignment and implicit casting 2020-10-15 17:21:33 +02:00
Mark Olesen
9c7aa9727a ENH: add UPstream::parRun(const bool)
- slightly neater code when disabling/restoring parallel state

  New
      const bool oldParRun = Pstream::parRun(false);
      ...
      Pstream::parRun(oldParRun);

  Old
      const bool oldParRun = Pstream::parRun();
      Pstream::parRun() = false;
      ...
      Pstream::parRun() = oldParRun;
2020-10-12 12:51:22 +02:00
Mark Olesen
8939a55653 ENH: relocate blockMesh polyMesh generation into library (for code reuse)
STYLE: adjust blockMesh advanced/non-advanced options

- make -merge-points "non-advanced" (for better exposure)
- make -write-obj "advanced" (-write-vtk is preferred)
2020-10-05 12:36:04 +02:00
Mark Olesen
5dc5ea928a ENH: add UPstream::subProcs() static method
- returns a range of `int` values that can be iterated across.
  For example,

      for (const int proci : Pstream::subProcs()) { ... }

  instead of

      for
      (
          int proci = Pstream::firstSlave();
          proci <= Pstream::lastSlave();
          ++proci
      )
      {
          ...
      }
2020-09-28 14:26:07 +02:00
Mark Olesen
e18ff114a6 ENH: add UPstream::allProcs() method
- returns a range of `int` values that can be iterated across.
  For example,

      for (const int proci : Pstream::allProcs()) { ... }

  instead of

      for (label proci = 0; proci < Pstream::nProcs(); ++proci) { ... }
2020-09-28 14:25:59 +02:00
Mark Olesen
9423d2bd83 CONFIG: improve support for compiler/link options (#1830)
- introduce WM_COMPILE_CONTROL variable to convey control information
  into the build rules.

  The convention (as per spack):
      - '+' to select a feature
      - '~' to deselect a feature

  Eg, to select the gold linker, and disable openmp
  (spaces are not required):

      WM_COMPILE_CONTROL="+gold ~openmp"

CONFIG: accept FOAM_EXTRA_LDFLAGS for AMD, gold, Mingw linkers

CONFIG: generalize PROJECT_LIBS (-ldl used almost universally)
2020-09-07 09:45:51 +02:00
Mark Olesen
b2bded48c9 STYLE: use Time::printExecutionTime() method
- makes format of ExecutionTime = ... output configurable (#788)
  and reduces code clutter.

STYLE: more consistent line-breaks after "End" tag
2020-08-07 09:24:56 +02:00
Mark Olesen
74a062d1d5 Merge remote-tracking branch 'origin/master' into develop 2020-07-28 08:42:12 +02:00
Mark Olesen
d5884c8d85 STYLE: use HashSet xor instead of two operations (faceZoneSet)
STYLE: use global operator instead of HashSet -= operator
2020-07-27 09:47:33 +02:00
mattijs
bcda061f54 ENH: checkMesh: improved checking on writeFields. Fixes #1786. 2020-07-23 17:26:09 +01:00
Mark Olesen
12c91b9472 STYLE: check autoPtr as plain bool instead of valid()
- cleaner code, more similarity with unique_ptr

  Now
      if (ptr)
      if (!ptr)

  instead
      if (ptr.valid())
      if (!ptr.valid())
2020-07-16 11:39:24 +02:00
Mark Olesen
9af3f85cf9 STYLE: simplify short-circuit involving autoPtr (#1775)
- with '&&' conditions, often better to check for non-null autoPtr
  first (it is cheap)

- check as bool instead of valid() method for cleaner code, especially
  when the wrapped item itself has a valid/empty or good.
  Also when handling multiple checks.

  Now
      if (ptr && ptr->valid())
      if (ptr1 || ptr2)

  instead
      if (ptr.valid() && ptr->valid())
      if (ptr1.valid() || ptr2.valid())
2020-07-16 10:17:25 +02:00
Mark Olesen
3baebcb101 STYLE: replace uses of autoPtr::empty() with bool check (#1775)
- less clutter using plain tests with the bool operator:

      (!ptr)  vs  (ptr.empty())
      (ptr)   vs  (!ptr.empty())
2020-07-16 08:58:22 +02:00
Mark Olesen
5dc04530d9 COMP: additional linkage libraries for AMD compiler (#1627) 2020-07-14 12:17:09 +02:00
mattijs
a86860430a BUG: checkMesh: index into surfaceScalarField. Fixes #1771. 2020-07-13 13:02:07 +01:00
mattijs
331e86cf17 BUG: checkMesh: index into surfaceScalarField. Fixes #1771. 2020-07-13 13:00:13 +01:00
Mark Olesen
6d965d699b BUG: mergeOrSplitBaffles -dict option ignored (fixes #1759)
- regression from f721b5344f
2020-07-01 18:41:31 +02:00
OpenFOAM bot
01ec92fd35 GIT: remove leading/trailing blank lines, trailing whitespace 2020-06-17 10:46:26 +02:00
Mark Olesen
c1c995d3fe COMP: fix some linkage issues for mingw
COMP: automatically add FlexLexer.h to MSwindows OSspecific

- useful, frequently forgotten step for cross-compiling
2020-06-16 23:56:41 +02:00
Kutalmis Bercin
5cbdb7a3d7 INT: various integrations from openfoam.org
ENH: add log FO
  ENH: improve log with scale, and offset entries
  BUG: ensure extrueMesh does not fail in parallel with wedge extrusion
  BUG: add missing clone and mapping funcs to copiedFixedValue, fixedMultiPhaseHeatFlux
  ENH: meshToMesh0::cellAddressing slight speed up for some geometries
  BUG:0003495: Divide-by-zero in SHF particle break-up model
  BUG:0003492: The formula in the OF is inconsistent with the Rosin-Rammler distribution theory formula
2020-06-11 13:30:29 +01:00
Mark Olesen
b87dd8147a ENH: add moveMesh -deltaT option
- overrides normal deltaT for testing accelerated motion.

  Can be useful to test mesh motions with constant/dynamicMeshDict
  entries (updateControl, updateInterval) where the mesh motion is
  much slower than any of the fluid physics.

  see commit 87bba9ae14
2020-06-10 15:29:07 +02:00
Mark Olesen
fec5093c04 ENH: add blockMesh -write-vtk option
- generates a vtk file in an ASCII, XML format (blockTopology.vtu).

  More information than the equivalent obj file since it includes
  connectivity, cell shapes and cell IDs (equivalent to the block
  numbers).
2020-06-04 22:15:26 +02:00
Mark Olesen
3e43edf056 ENH: unify use of dictionary method names
- previously introduced `getOrDefault` as a dictionary _get_ method,
  now complete the transition and use it everywhere instead of
  `lookupOrDefault`. This avoids mixed usage of the two methods that
  are identical in behaviour, makes for shorter names, and promotes
  the distinction between "lookup" access (ie, return a token stream,
  locate and return an entry) and "get" access (ie, the above with
  conversion to concrete types such as scalar, label etc).
2020-06-02 17:26:03 +02:00
Mark Olesen
f721b5344f ENH: report dictionary name actually used (for -dict option) 2020-06-02 14:29:36 +02:00
Mark Olesen
31b172217c ENH: support predicate checks for argList (similar to dictionary methods)
- Favour use of argList methods that are more similar to dictionary
  method names with the aim of reducing the cognitive load.

  * Silently deprecate two-parameter get() method in favour of the
    more familiar getOrDefault.
  * Silently deprecate opt() method in favour of get()

  These may be verbosely deprecated in future versions.
2020-06-02 13:51:18 +02:00
Mark Olesen
03c2373d2c ENH: align meshRefinement dictionary wrapper with dictionary code
COMP: do not rely on implicit conversion to PtrList from Istream
2020-05-26 08:56:11 +02:00
Mark Olesen
44b225604d ENH: add blockMeshDict "mergeType" keyword (#1589)
- enumerated values are (points | topology) which can be optionally
  specified in the blockMeshDict. Default is 'topology'.

  If the command-line option `blockMesh -merge-points` is specified,
  this has absolute priority over any blockMeshDict entry.

STYLE: changed blockMesh "-blockTopology" option to "-write-obj"

- this is more specific to what it does. Potentially wish to add a
  "-write-vtk" option in the future.

TUT: adjust tutorials to use preferred or necessary merge strategies:

  * channel395DFSEM - topology
  * nozzleFlow2D - points
  * pipeCyclic - points
2020-05-13 20:59:03 +02:00
Mark Olesen
595579e01d COMP: use -iquotedir for including the local '.' directory
- adds into the include-quoted search list instead the general (-Idir)
  search list.

  * makes it less subject to ordering (since it will now generally be
    searched first) and makes it less subject to how duplicate removal
    is implemented. In some compilers (#1627), the last instance of
    a duplicate directory would be used and not the first instance.

  * removes clutter in some Make/options files

COMP: add missing linkage libraries
2020-05-06 13:06:40 +02:00
Mark Olesen
b4bf26ea4f Merge remote-tracking branch 'origin/master' into develop 2020-05-06 10:13:56 +02:00
Mark Olesen
8756791b00 ENH: use topological merge as default for blockMesh (closes #1589)
- faster and fewer issues with high aspect ratio cells.

- `blockMesh -merge-geometric` for old behaviour
2020-05-04 16:19:03 +02:00
Mark Olesen
8cfb483054 STYLE: some general spelling fixes 2020-05-04 09:15:21 +02:00
Mark Olesen
8a5d108fd2 STYLE: update PrimitivePatch (#1648)
- simplified templating, which cleans up code and does not appear to
  break any normal user coding.

ENH: unique_ptr instead of homegrown demand-driven handling.
2020-04-30 15:52:42 +02:00
Mark Olesen
79048eb68f STYLE: use writeEntry(), beginBlock(), endBlock() methods
- use dictionary::get<..> instead of lookup in a few more places
2020-04-28 10:41:23 +02:00
Mark Olesen
5ab04f5745 GIT: remove prebuilt pdf file(s) 2020-04-27 09:45:17 +02:00
mattijs
c3571b7357 ENH: topoDistanceData: templated on passive data type.
Also adds pointTopoDistance, edgeTopoDistance.
2020-04-24 12:34:08 +01:00
Mark Olesen
560c053bc8 ENH: support independent specification of surface read/write format (#1600)
- adjustments to internal handling to improve run-time addition of
  other formats (eg, with additional user library)

  For example, to write a binary STL with a '.stl' extension:

    $ surfaceMeshConvert input.obj  -write-format stlb  output.stl

  Or in a sampler,
  to specify the input type without ambiguity:

  surf
  {
      type        meshedSurface;
      surface     sampling.inp;

      fileType    starcd;
      scale       0.001;
      ...
  }

STYLE: regularize naming for input/output scaling

  * -read-scale   (compat: -scaleIn)
  * -write-scale  (compat: -scaleOut)

CONFIG: change edge/surface selection name for STARCD format

- now select as "starcd" instead of "inp" to avoid naming ambiguity
  with abaqus
2020-04-03 19:11:50 +02:00
Mark Olesen
3e3193aa5e Merge remote-tracking branch 'origin/master' into develop 2020-03-16 15:27:27 +01:00
Andrew Heather
69a61bf835 BUG: objToVTK - corrected for empty lines in obj file. See #1632 2020-03-16 10:21:34 +00:00
Mark Olesen
a456e9ae92 STYLE: relocate nonCoupledBoundaryTree into meshSearcher
- use point::uniform in more places
2020-02-24 18:41:02 +01:00
Mark Olesen
4e6caf8d61 STYLE: return Switch by value, not const-reference 2020-02-21 11:44:29 +01:00
Mark Olesen
86fe2b7bc9 STYLE: remove dead code, refactor constructors in extrudePatchMesh 2020-02-21 11:13:22 +01:00
Mark Olesen
42299dca22 ENH: use IOstreamOption for writeObject() calls.
- reduces the number of parameters that are being passed around
  and allows future additions into the IOstreamOption with mininal
  effort.
2020-02-19 09:25:33 +00:00
Mark Olesen
4307e1719f STYLE: adjust names, locations for fileFormats
- renamed 'core/' -> 'base/' to avoid gitignore masking when re-adding
  files

- rename 'nas/' to 'nastran/' for more clarity

- relocated OBJstream from surfMesh to fileFormats

STYLE: remove unused parseNASCoord. Was deprecated 2017-09
2020-02-18 13:51:20 +01:00
mattijs
01c14532bd ENH: checkMesh: write cellZone, faceZone info. See #1543. 2020-02-06 12:36:26 +00:00
Kutalmis Bercin
f55da4b690 ENH: allow datToFoam writing points dict directly
- refactors the corresponding tutorial by removing redundant files and items:
    compressible/rhoCentralFoam/biconic25-55Run35
2020-01-29 12:26:36 +00:00
Mark Olesen
e252ec46dc COMP: backport of updates for gcc-92 compilation 2020-01-28 16:09:18 +01:00
Mark Olesen
ee96dba0cf STYLE: simplify Random constructors
COMP: use generated methods in a few more places
2020-01-21 12:12:44 +01:00
Mark Olesen
f0be8679f6 ENH: provide defaultName() static method for patches, zones
- consistent way of writing "patch" + Foam::name(id) etc.
2020-01-16 13:24:23 +01:00
Mark Olesen
2a98c4e665 ENH: consistency improvements for surface patch handling (fixes #483)
- remove (unused) Istream constructors, prune some unused methods,
  rationalize write() vs writeDict().
  Deprecate inconsistent construction order.

- handle empty names for ".ftr" surface patches (for plain triSurface
  format) with double-quoted strings for more reliable streaming.
  Written on a single line.

  This is _backward_ compatible, but if users have been parsing these
  files manually, they will need to adjust their code.

Previously:
```
  (
  frt-fairing:001%1
  empty

  windshield:002%2
  empty
  ...
  )
```

Updated (with example handling of empty name):
```
  (
  frt-fairing:001%1 empty

  windshield:002%2 ""
  ...
  )
```
2020-01-16 10:07:26 +01:00
Mattijs Janssens
b8c2c0acf6 ENH: shm: support for automatic faceZones 2020-01-16 12:22:02 +00:00
mattijs
0fc4b79dde ENH: checkMesh: write minPyrVol. Fixes #1543. 2020-01-06 13:59:16 +00:00
mattijs
28eb349a30 BUG: checkMesh: handling of unsorted points. Fixes #920. 2020-01-06 11:22:34 +00:00
Andrew Heather
5d7d24df94 GIT: Housekeeping 2019-12-06 17:43:08 +00:00
Mark Olesen
1310e85225 ENH: support 'get()' for retrieving argList options
- previously only had 'opt<..>()' for options, but 'get<..>()'
  provides more similarity with dictionary methods.
  The 'opt<..>()' method is retained.
2019-11-26 21:07:11 +01:00
Mark Olesen
241dee29b2 ENH: add transformPoints -time option (issue #1510) 2019-11-25 10:55:05 +01:00
Mark Olesen
98467036b3 STYLE: regularize quoting and exit on failed 'cd' 2019-11-13 13:19:16 +01:00
Mark Olesen
7c1190f0b1 ENH: rationalize some string methods.
- silently deprecate 'startsWith', 'endsWith' methods
  (added in 2016: 2b14360662), in favour of
  'starts_with', 'ends_with' methods, corresponding to C++20 and
  allowing us to cull then in a few years.

- handle single character versions of starts_with, ends_with.

- add single character version of removeEnd and silently deprecate
  removeTrailing which did the same thing.

- drop the const versions of removeRepeated, removeTrailing.
  Unused and with potential confusion.

STYLE: use shrink_to_fit(), erase()
2019-11-11 18:50:00 +01:00
Mark Olesen
ec7e3c88e4 ENH: test for WM_PROJECT_DIR being set/unset in scripts 2019-11-06 09:18:51 +01:00
Andrew Heather
fdf8d10ab4 Merge commit 'e9219558d7' into develop-v1906 2019-12-05 11:47:19 +00:00
OpenFOAM bot
e9219558d7 GIT: Header file updates 2019-10-31 14:48:44 +00:00
Mark Olesen
dcff32ea65 STYLE: use move insert in featurePointConformer 2019-09-30 09:40:59 +02:00
Mark Olesen
b6bf9129f6 DEFEATURE: pointer dereferencing for HashTable iterator
- this largely reverts 3f0f218d88 and 4ee65d12c4.

  Consistent addressing with support for wrapped pointer types (eg,
  autoPtr, std::unique_ptr) has proven to be less robust than desired.
  Thus rescind HashTable iterator '->' dereferencing (from APR-2019).
2019-09-27 19:45:54 +02:00
OpenFOAM bot
38b53e5346 STYLE: use default destructor in header definitions 2019-09-24 12:14:36 +02:00
mattijs
61dfa9b544 ENH: checkMesh: do not create wallDist unless in fvSchemes. See #71 2019-09-19 14:37:38 +01:00
mattijs
1307836caa ENH: checkMesh: write wall distance. See #71 2019-09-02 12:40:22 +01:00
Mark Olesen
dade6957c8 ENH: checkMesh report num global patches and min-max 2019-08-19 14:11:31 +02:00
mattijs
9815d37db3 BUG: corrupt extrudeToRegionMesh boundary patches in parallel (fixes #1295)
- new patches were added to the end of existing patches, which placed
  them _after_ the processor patches. This is incorrect.
2019-08-16 01:07:00 +01:00
Mark Olesen
1d79c0452c ENH: additional contiguous traits (#1378)
- change contiguous from a series of global functions to separate
  templated traits classes:

    - is_contiguous
    - is_contiguous_label
    - is_contiguous_scalar

  The static constexpr 'value' and a constexpr conversion operator
  allow use in template expressions.  The change also makes it much
  easier to define general traits and to inherit from them.

  The is_contiguous_label and is_contiguous_scalar are special traits
  for handling data of homogeneous components of the respective types.
2019-07-29 11:36:30 +02:00
Mark Olesen
5382c2f590 STYLE: fix namespace documentation for CGAL-related content 2019-07-30 18:15:48 +02:00
Mark Olesen
f94be1bebb ENH: use FatalIOErrorInLookup instead of FatalErrorInLookup 2019-07-16 10:26:51 +02:00
Mark Olesen
fb09f56aba ENH: use FatalErrorInLookup macros (#1362) 2019-07-12 18:00:00 +02:00
Mark Olesen
1d86fc4f6b ENH: add single-parameter sortedOrder() function 2019-07-17 11:08:40 +02:00
Andrew Heather
96e7dd8da6 Merge branch 'develop' 2019-06-27 13:27:57 +01:00
mattijs
64ed81b78f BUG: gmsh: skip empty lines. See #1155.
Fix provided by Gavin Ridley.
2019-04-11 11:07:28 +01:00
Mark Olesen
b5d775a691 STYLE: avoid deprecated lookup methods 2019-05-22 15:06:12 +01:00
Mark Olesen
6c8f6a2f50 ENH: support all 12 Euler rotation orders (#1292)
- adjust naming of quaternion 'rotationSequence' to be 'eulerOrder'
  to reflect its purpose.

- provide rotation matrices directly for these rotation orders in
  coordinateRotations::euler for case in which the rotation tensor
  is required but not a quaternion.
2019-05-10 11:20:21 +02:00
Mark Olesen
897528da1a ENH: streamline handling of static/dynamic libs in detection scripts 2019-04-29 10:04:44 +02:00
Mark Olesen
beefee48d4 COMP: adjust compilation order with updated interdependencies
- Eg, with surface writers now in surfMesh, there are fewer libraries
  depending on conversion and sampling.

COMP: regularize linkage ordering and avoid some implicit linkage (#1238)
2019-04-28 14:44:33 +02:00
Mark Olesen
e1609d16d1 STYLE: use degToRad() instead of pi/180 2019-04-26 11:48:27 +02:00
mattijs
bc53e50c90 CONTRIBUTION: gmshToFoam: support version 4 mesh format. Fixes #1155.
Patch contributed by Gavin Ridley.
2019-04-25 16:33:17 +01:00
mattijs
7cc9961ff2 BUG: gmsh: skip empty lines. See #1155.
Fix provided by Gavin Ridley.
2019-04-11 11:07:28 +01:00
Mark Olesen
39c91d8440 ENH: support HashTable iterator pointer dereference 2019-04-06 16:00:21 +02:00
mattijs
a01b05b8c4 ENH: renumberMesh: renumber refinement data. Fixes #1241. 2019-04-01 09:48:23 +01:00
mattijs
83e321d3e4 ENH: snappyHexMesh: allow cross-patch merging of patch faces. Fixes #1255. 2019-03-27 15:04:48 +00:00
mattijs
f513f8bec6 ENH: extrudeMesh: -dict. See #1253 2019-03-27 10:39:35 +00:00
mattijs
7d077626d3 ENH: moveDynamicMesh: add -overwrite option. Fixes #1233. 2019-03-13 15:43:38 +00:00
Mark Olesen
773ec00d4b ENH: improved consistency of surface writers (#1232)
- remove writeGeometry() in favour of write() and make it pure virtual
  so that all writers must explicitly deal with it.

- establish proxy extension at construction time and treated as an
  invariant thereafter. This avoids potentially surprising changes in
  behaviour when writing.
2019-03-11 15:09:03 +01:00
Mark Olesen
c9549ba6a4 GIT: added PDRblockMesh to Allwmake 2019-02-25 07:46:21 +01:00
Mark Olesen
84270ed667 ENH: new PDRblockMesh mesh generation utility (issue #1216)
- While a rectilinear mesh can be created with blockMesh, not every mesh
  created with blockMesh will satisfy the requirements for being a
  rectilinear mesh.

  This alternative to blockMesh uses a single block that is aligned
  with the xy-z directions and specifications of the control points,
  mesh divisions and expansion ratios. For example,

    x
    {
        points  ( -13.28 -0.10 6.0 19.19 );
        nCells  (  10  12 10 );
        ratios  ( 0.2   1  5 );
    }

    y { ... }
    z { ... }

  With only one block, the boundary patch definition is simple and the
  canonical face number is used directly. For example,

    inlet
    {
        type    patch;
        faces   ( 0 );
    }
    outlet
    {
        type    patch;
        faces   ( 1 );
    }

    sides
    {
        type    patch;
        faces   ( 2 3 );
    }

    ...

- After a mesh is defined, it is trivial to retrieve mesh-related
  information such as cell-volume, cell-centres for any i-j-k location
  without an actual polyMesh.

STYLE: remove -noFunctionObjects from blockMesh

- no time loop, so function objects cannot be triggered anyhow.
2019-02-23 15:45:32 +01:00
Mark Olesen
181c974b11 ENH: improved sample surfaces and surface writers (#1206)
- The writers have changed from being a generic state-less set of
  routines to more properly conforming to the normal notion of a writer.
  These changes allow us to combine output fields (eg, in a single
  VTK/vtp file for each timestep).

  Parallel data reduction and any associated bookkeeping is now part
  of the surface writers.
  This improves their re-usability and avoids unnecessary
  and premature data reduction at the sampling stage.

  It is now possible to have different output formats on a per-surface
  basis.

- A new feature of the surface sampling is the ability to "store" the
  sampled surfaces and fields onto a registry for reuse by other
  function objects.

  Additionally, the "store" can be triggered at the execution phase
  as well
2019-02-07 18:11:34 +01:00
Mark Olesen
170041aaf5 ENH: for-range, forAllIters() ... in applications/
- reduced clutter when iterating over containers
2019-01-07 09:20:51 +01:00
Mark Olesen
60234ab007 STYLE: reduced nesting on return branching 2019-02-13 08:06:36 +01:00
OpenFOAM bot
154029ddd0 BOT: Cleaned up header files 2019-02-06 12:28:23 +00:00
mattijs
14e6b198cc ENH: checkMesh: write correct faceWeights. Fixes #1099. 2019-01-31 15:28:01 +00:00
Andrew Heather
da29c4f0d0 Merge branch 'feature-snappyHexMesh-check' into 'develop'
Feature snappy hex mesh check

See merge request Development/OpenFOAM-plus!229
2019-01-28 08:57:46 +00:00
Mark Olesen
3b91160027 STYLE: centralize example dictionaries under etc/ (issue #1074)
- as well as being more convenient to find, this is necessary when the
  OpenFOAM installation is without sources or tutorials
2019-01-26 17:46:08 +01:00
Mark Olesen
1c85c64984 STYLE: clarify input requirements for extrusion models (#1181)
- changed the sectorCoeffs keyword to 'point' from 'axisPt'
  for more similarity with other dictionaries.
  Continue to accept 'axisPt' for compatibility.
2019-01-24 09:40:12 +01:00
Mark Olesen
8b3a00efcc STYLE: fixup very old-style case headers 2019-01-24 08:44:41 +01:00
Mark Olesen
567ae55e8e STYLE: improve input check on gmshToFoam 2019-01-23 22:45:00 +01:00
mattijs
47d29b1cdd ENH: snappyHexMesh: user size limit. See #972. 2019-01-23 12:25:54 +00:00
Mark Olesen
a5cc0ffcad STYLE: use const reference for caught exceptions 2019-01-23 09:03:06 +01:00
Mark Olesen
53efb24a8d STYLE: use ListOps::uniqueEqOp instead of local definition 2019-01-18 15:34:28 +01:00
mattijs
6ccdc77468 BUG: trackingInverseDistance: fix trackingInverseDistance. Fixes #736. 2019-01-17 18:21:38 +00:00
Mark Olesen
f498d09dbf ENH: add simplified gather methods for globalIndex with default communicator
- when combining lists in processor order this simplifies code and
  reduces memory overhead.

  Write this:
    ----
    labelList collected;

    const globalIndex sizing(input.size());
    sizing.gather(input, collected);
    ----

  OR

    ----
    labelList collected;
    globalIndex::gatherOp(input, collected);
    ----

  Instead of this:

    ----
    labelList collected;

    List<labelList> scratch(Pstream::nProcs());
    scratch[Pstream::myProcNo()] = input;
    Pstream::gatherList(scratch);

    if (Pstream::master())
    {
        collected = ListListOps::combine<labelList>
        (
            scratch,
            accessOp<labelList>()
        );
    }
    scratch.clear();
    ----
2019-01-16 21:33:06 +01:00
Mark Olesen
2067014079 ENH: minor consistency improvements for bounding box
- a valid() method (same as !empty() call) for consistency with other
  containers and data types

- a centre() method (same as midpoint() method) for consistency with
  other OpenFOAM geometric entities
2019-01-09 09:32:23 +01:00
Mark Olesen
14a404170b ENH: for-range, forAllIters() ... in applications/utilities
- reduced clutter when iterating over containers
2019-01-07 09:20:51 +01:00
Mark Olesen
74d9dc3f50 BUG: polyMesh constructor AUTO_WRITE flag, ignored readOpt (#1147)
- fixed some more places with an explicit AUTO_WRITE.

BUG: revert handling of the readOption. It should not be NO_READ.

  In cases where the user a IOobject without specifying read/write, it
  defaults to NO_READ anyhow. However, the move constructor can also
  be called with empty lists and a read option. This has the same
  signature, but obviously will not work with NO_READ.
2019-01-07 22:23:19 +01:00
Mark Olesen
e2bc0b55b9 COMP: use std::move() explicitly to avoid copying 2019-01-02 15:56:54 +01:00