c4f1349496
- this shifts responsibility away from caller to the individual writers for knowing which file formats are supported and which file ending is appropriate. When the writer receives the output format request, it can elect to downgrade or otherwise adjust it to what it can actually manage (eg, legacy vs xml vs xml-append). But currently still just with legacy format backends.
1386 lines
39 KiB
C
1386 lines
39 KiB
C
/*---------------------------------------------------------------------------*\
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========= |
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\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
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\\ / O peration |
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\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
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\\/ M anipulation | Copyright (C) 2016-2017 OpenCFD Ltd.
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-------------------------------------------------------------------------------
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License
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This file is part of OpenFOAM.
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OpenFOAM is free software: you can redistribute it and/or modify it
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under the terms of the GNU General Public License as published by
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the Free Software Foundation, either version 3 of the License, or
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(at your option) any later version.
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OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
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ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
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FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
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for more details.
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You should have received a copy of the GNU General Public License
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along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
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Application
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foamToVTK
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Group
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grpPostProcessingUtilities
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Description
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Legacy VTK file format writer.
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- Handles volFields, pointFields, surfaceScalarField, surfaceVectorField
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fields.
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- Mesh topo changes.
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- Both ascii and binary.
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- Single time step writing.
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- Write subset only.
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- Automatic decomposition of cells; polygons on boundary undecomposed since
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handled by vtk.
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Usage
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\b foamToVTK [OPTION]
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Options:
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- \par -ascii
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Write VTK data in ASCII format instead of binary.
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- \par -mesh \<name\>
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Use a different mesh name (instead of -region)
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- \par -fields \<fields\>
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Convert selected fields only. For example,
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\verbatim
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-fields "( p T U )"
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\endverbatim
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The quoting is required to avoid shell expansions and to pass the
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information as a single argument.
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- \par -surfaceFields
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Write surfaceScalarFields (e.g., phi)
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- \par -cellSet \<name\>
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- \par -faceSet \<name\>
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- \par -pointSet \<name\>
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Restrict conversion to the cellSet, faceSet or pointSet.
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- \par -nearCellValue
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Output cell value on patches instead of patch value itself
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- \par -noInternal
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Do not generate file for mesh, only for patches
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- \par -noLagrangian
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Suppress writing lagrangian positions and fields.
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- \par -noPointValues
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No pointFields
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- \par -noFaceZones
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No faceZones
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- \par -noLinks
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(in parallel) do not link processor files to master
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- \par poly
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write polyhedral cells without tet/pyramid decomposition
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- \par -allPatches
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Combine all patches into a single file
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- \par -excludePatches \<patchNames\>
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Specify patches (wildcards) to exclude. For example,
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\verbatim
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-excludePatches '( inlet_1 inlet_2 "proc.*")'
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\endverbatim
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The quoting is required to avoid shell expansions and to pass the
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information as a single argument. The double quotes denote a regular
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expression.
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- \par -useTimeName
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use the time index in the VTK file name instead of the time index
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Note
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mesh subset is handled by meshSubsetHelper. Slight inconsistency in
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interpolation: on the internal field it interpolates the whole volField
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to the whole-mesh pointField and then selects only those values it
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needs for the subMesh (using the fvMeshSubset cellMap(), pointMap()
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functions). For the patches however it uses the
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fvMeshSubset.interpolate function to directly interpolate the
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whole-mesh values onto the subset patch.
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Note
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\par new file format:
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no automatic timestep recognition.
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However can have .pvd file format which refers to time simulation
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if XML *.vtu files are available:
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\verbatim
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<?xml version="1.0"?>
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<VTKFile type="Collection"
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version="0.1"
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byte_order="LittleEndian"
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compressor="vtkZLibDataCompressor">
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<Collection>
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<DataSet timestep="50" file="pitzDaily_2.vtu"/>
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<DataSet timestep="100" file="pitzDaily_3.vtu"/>
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<DataSet timestep="150" file="pitzDaily_4.vtu"/>
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<DataSet timestep="200" file="pitzDaily_5.vtu"/>
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<DataSet timestep="250" file="pitzDaily_6.vtu"/>
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<DataSet timestep="300" file="pitzDaily_7.vtu"/>
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<DataSet timestep="350" file="pitzDaily_8.vtu"/>
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<DataSet timestep="400" file="pitzDaily_9.vtu"/>
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<DataSet timestep="450" file="pitzDaily_10.vtu"/>
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<DataSet timestep="500" file="pitzDaily_11.vtu"/>
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</Collection>
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</VTKFile>
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\endverbatim
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\*---------------------------------------------------------------------------*/
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#include "fvCFD.H"
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#include "pointMesh.H"
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#include "volPointInterpolation.H"
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#include "emptyPolyPatch.H"
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#include "labelIOField.H"
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#include "scalarIOField.H"
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#include "sphericalTensorIOField.H"
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#include "symmTensorIOField.H"
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#include "tensorIOField.H"
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#include "faceZoneMesh.H"
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#include "Cloud.H"
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#include "passiveParticle.H"
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#include "stringListOps.H"
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#include "meshSubsetHelper.H"
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#include "readFields.H"
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#include "faceSet.H"
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#include "pointSet.H"
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#include "foamVtkOutputOptions.H"
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#include "foamVtkInternalWriter.H"
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#include "foamVtkPatchWriter.H"
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#include "foamVtkSurfaceMeshWriter.H"
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#include "foamVtkLagrangianWriter.H"
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#include "foamVtkWriteFaceSet.H"
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#include "foamVtkWritePointSet.H"
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#include "foamVtkWriteSurfFields.H"
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#include "memInfo.H"
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// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
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template<class GeoField>
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void print(const char* msg, Ostream& os, const UPtrList<const GeoField>& flds)
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{
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if (flds.size())
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{
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os << msg;
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forAll(flds, i)
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{
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os << ' ' << flds[i].name();
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}
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os << endl;
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}
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}
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void print(Ostream& os, const wordList& flds)
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{
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forAll(flds, i)
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{
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os << ' ' << flds[i];
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}
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os << endl;
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}
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labelList getSelectedPatches
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(
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const polyBoundaryMesh& patches,
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const wordRes& excludePatches
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)
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{
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DynamicList<label> patchIDs(patches.size());
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Info<< "Combining patches:" << endl;
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forAll(patches, patchi)
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{
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const polyPatch& pp = patches[patchi];
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if
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(
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isType<emptyPolyPatch>(pp)
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|| (Pstream::parRun() && isType<processorPolyPatch>(pp))
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)
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{
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Info<< " discarding empty/processor patch " << patchi
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<< " " << pp.name() << endl;
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}
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else if (excludePatches.match(pp.name()))
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{
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Info<< " excluding patch " << patchi
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<< " " << pp.name() << endl;
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}
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else
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{
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patchIDs.append(patchi);
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Info<< " patch " << patchi << " " << pp.name() << endl;
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}
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}
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return patchIDs.shrink();
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}
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//
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// Process args for output options
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// Default from foamVtkOutputOptions is inline ASCII xml
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//
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foamVtkOutput::outputOptions getOutputOptions(const argList& args)
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{
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foamVtkOutput::outputOptions opts;
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{
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opts.legacy(true);
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if (!args.optionFound("ascii"))
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{
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if (sizeof(floatScalar) != 4 || sizeof(label) != 4)
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{
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opts.ascii(true);
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WarningInFunction
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<< "Using ASCII rather than binary VTK format since "
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<< "floatScalar and/or label are not 4 bytes in size."
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<< nl << endl;
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}
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else
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{
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opts.ascii(false);
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}
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}
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}
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return opts;
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}
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fileName relativeName(const fileName& parent, const fileName& file)
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{
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string::size_type next = parent.size();
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if
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(
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file.startsWith(parent)
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&& next < file.size()
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&& file[next] == '/'
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)
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{
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return file.substr(next+1);
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}
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else
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{
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return file;
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}
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}
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fileName relativeName(const Time& runTime, const fileName& file)
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{
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return relativeName(runTime.path(), file);
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}
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// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
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int main(int argc, char *argv[])
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{
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argList::addNote
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(
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"legacy VTK file format writer"
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);
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timeSelector::addOptions();
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#include "addRegionOption.H"
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argList::addOption
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(
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"fields",
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"wordList",
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"only convert the specified fields - eg '(p T U)'"
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);
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argList::addOption
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(
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"cellSet",
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"name",
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"convert a mesh subset corresponding to the specified cellSet"
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);
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argList::addOption
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(
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"faceSet",
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"name",
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"restrict conversion to the specified faceSet"
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);
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argList::addOption
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(
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"pointSet",
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"name",
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"restrict conversion to the specified pointSet"
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);
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argList::addBoolOption
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(
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"ascii",
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"write in ASCII format instead of binary"
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);
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argList::addBoolOption
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(
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"poly",
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"write polyhedral cells without tet/pyramid decomposition"
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);
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argList::addBoolOption
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(
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"surfaceFields",
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"write surfaceScalarFields (e.g., phi)"
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);
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argList::addBoolOption
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(
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"nearCellValue",
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"use cell value on patches instead of patch value itself"
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);
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argList::addBoolOption
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(
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"noInternal",
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"do not generate file for mesh, only for patches"
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);
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argList::addBoolOption
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(
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"noLagrangian",
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"suppress writing lagrangian positions and fields"
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);
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argList::addBoolOption
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(
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"noPointValues",
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"no pointFields"
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);
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argList::addBoolOption
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(
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"allPatches",
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"combine all patches into a single file"
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);
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argList::addOption
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(
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"excludePatches",
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"wordReList",
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"a list of patches to exclude - eg '( inlet \".*Wall\" )' "
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);
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argList::addBoolOption
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(
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"noFaceZones",
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"no faceZones"
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);
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argList::addBoolOption
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(
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"noLinks",
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"don't link processor VTK files - parallel only"
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);
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argList::addBoolOption
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(
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"useTimeName",
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"use the time name instead of the time index when naming the files"
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);
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#include "setRootCase.H"
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cpuTime timer;
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memInfo mem;
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Info<< "Initial memory "
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<< mem.update().size() << " kB" << endl;
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#include "createTime.H"
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const bool decomposePoly = !args.optionFound("poly");
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const bool doWriteInternal = !args.optionFound("noInternal");
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const bool doFaceZones = !args.optionFound("noFaceZones");
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const bool doLinks = !args.optionFound("noLinks");
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const bool useTimeName = args.optionFound("useTimeName");
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const bool noLagrangian = args.optionFound("noLagrangian");
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const bool nearCellValue = args.optionFound("nearCellValue");
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const foamVtkOutput::outputOptions fmtType = getOutputOptions(args);
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if (nearCellValue)
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{
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WarningInFunction
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<< "Using neighbouring cell value instead of patch value"
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<< nl << endl;
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}
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const bool noPointValues = args.optionFound("noPointValues");
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if (noPointValues)
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{
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WarningInFunction
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<< "Outputting cell values only" << nl << endl;
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}
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const bool allPatches = args.optionFound("allPatches");
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wordReList excludePatches;
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if (args.optionFound("excludePatches"))
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{
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args.optionLookup("excludePatches")() >> excludePatches;
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Info<< "Not including patches " << excludePatches << nl << endl;
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}
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string vtkName = runTime.caseName();
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word cellSetName;
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if (args.optionReadIfPresent("cellSet", cellSetName))
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{
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vtkName = cellSetName;
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}
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else if (Pstream::parRun())
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{
|
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// Strip off leading casename, leaving just processor_DDD ending.
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string::size_type i = vtkName.rfind("processor");
|
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|
|
if (i != string::npos)
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{
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vtkName = vtkName.substr(i);
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}
|
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}
|
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|
|
word faceSetName;
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args.optionReadIfPresent("faceSet", faceSetName);
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|
|
|
word pointSetName;
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args.optionReadIfPresent("pointSet", pointSetName);
|
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|
|
#include "createNamedMesh.H"
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|
|
// VTK/ directory in the case
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fileName fvPath(runTime.path()/"VTK");
|
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|
|
// Directory of mesh (region0 gets filtered out)
|
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fileName regionPrefix;
|
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if (regionName != polyMesh::defaultRegion)
|
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{
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fvPath = fvPath/regionName;
|
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regionPrefix = regionName;
|
|
}
|
|
|
|
if (isDir(fvPath))
|
|
{
|
|
if
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|
(
|
|
args.optionFound("time")
|
|
|| args.optionFound("latestTime")
|
|
|| cellSetName.size()
|
|
|| faceSetName.size()
|
|
|| pointSetName.size()
|
|
|| regionName != polyMesh::defaultRegion
|
|
)
|
|
{
|
|
Info<< "Keeping old VTK files in " << fvPath << nl << endl;
|
|
}
|
|
else
|
|
{
|
|
Info<< "Deleting old VTK files in " << fvPath << nl << endl;
|
|
|
|
rmDir(fvPath);
|
|
}
|
|
}
|
|
|
|
mkDir(fvPath);
|
|
|
|
instantList timeDirs = timeSelector::select0(runTime, args);
|
|
|
|
// Mesh wrapper: does subsetting and decomposition
|
|
meshSubsetHelper meshRef(mesh, meshSubsetHelper::SET, cellSetName);
|
|
|
|
// Collect decomposition information etc.
|
|
foamVtkCells foamVtkMeshCells(fmtType, decomposePoly);
|
|
|
|
Info<< "VTK mesh topology: "
|
|
<< timer.cpuTimeIncrement() << " s, "
|
|
<< mem.update().size() << " kB" << endl;
|
|
|
|
#include "findClouds.H"
|
|
|
|
forAll(timeDirs, timeI)
|
|
{
|
|
runTime.setTime(timeDirs[timeI], timeI);
|
|
|
|
Info<< "Time: " << runTime.timeName() << endl;
|
|
|
|
const word timeDesc =
|
|
useTimeName ? runTime.timeName() : Foam::name(runTime.timeIndex());
|
|
|
|
// Check for new polyMesh/ and update mesh, fvMeshSubset and cell
|
|
// decomposition.
|
|
polyMesh::readUpdateState meshState = meshRef.readUpdate();
|
|
|
|
const fvMesh& mesh = meshRef.mesh();
|
|
if
|
|
(
|
|
meshState == polyMesh::TOPO_CHANGE
|
|
|| meshState == polyMesh::TOPO_PATCH_CHANGE
|
|
)
|
|
{
|
|
// Trigger change for vtk cells too
|
|
foamVtkMeshCells.clear();
|
|
}
|
|
|
|
// If faceSet: write faceSet only (as polydata)
|
|
if (faceSetName.size())
|
|
{
|
|
// Load the faceSet
|
|
faceSet set(mesh, faceSetName);
|
|
|
|
// Filename as if patch with same name.
|
|
mkDir(fvPath/set.name());
|
|
|
|
fileName outputName
|
|
(
|
|
fvPath/set.name()/set.name()
|
|
+ "_"
|
|
+ timeDesc
|
|
);
|
|
Info<< " faceSet : "
|
|
<< relativeName(runTime, outputName) << nl;
|
|
|
|
foamVtkOutput::writeFaceSet
|
|
(
|
|
meshRef.mesh(),
|
|
set,
|
|
outputName,
|
|
fmtType
|
|
);
|
|
continue;
|
|
}
|
|
|
|
// If pointSet: write pointSet only (as polydata)
|
|
if (pointSetName.size())
|
|
{
|
|
// Load the pointSet
|
|
pointSet set(mesh, pointSetName);
|
|
|
|
// Filename as if patch with same name.
|
|
mkDir(fvPath/set.name());
|
|
|
|
fileName outputName
|
|
(
|
|
fvPath/set.name()/set.name()
|
|
+ "_"
|
|
+ timeDesc
|
|
);
|
|
Info<< " pointSet : "
|
|
<< relativeName(runTime, outputName) << nl;
|
|
|
|
foamVtkOutput::writePointSet
|
|
(
|
|
meshRef.mesh(),
|
|
set,
|
|
outputName,
|
|
fmtType
|
|
);
|
|
continue;
|
|
}
|
|
|
|
|
|
// Search for list of objects for this time
|
|
IOobjectList objects(mesh, runTime.timeName());
|
|
|
|
HashSet<word> selectedFields;
|
|
const bool specifiedFields = args.optionReadIfPresent
|
|
(
|
|
"fields",
|
|
selectedFields
|
|
);
|
|
|
|
// Construct the vol fields (on the original mesh if subsetted)
|
|
|
|
PtrList<const volScalarField> vScalarFld;
|
|
PtrList<const volVectorField> vVectorFld;
|
|
PtrList<const volSphericalTensorField> vSphTensorf;
|
|
PtrList<const volSymmTensorField> vSymTensorFld;
|
|
PtrList<const volTensorField> vTensorFld;
|
|
|
|
if (!specifiedFields || selectedFields.size())
|
|
{
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
vScalarFld
|
|
);
|
|
print(" volScalar :", Info, vScalarFld);
|
|
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
vVectorFld
|
|
);
|
|
print(" volVector :", Info, vVectorFld);
|
|
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
vSphTensorf
|
|
);
|
|
print(" volSphericalTensor :", Info, vSphTensorf);
|
|
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
vSymTensorFld
|
|
);
|
|
print(" volSymmTensor :", Info, vSymTensorFld);
|
|
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
vTensorFld
|
|
);
|
|
print(" volTensor :", Info, vTensorFld);
|
|
}
|
|
|
|
const label nVolFields =
|
|
vScalarFld.size()
|
|
+ vVectorFld.size()
|
|
+ vSphTensorf.size()
|
|
+ vSymTensorFld.size()
|
|
+ vTensorFld.size();
|
|
|
|
|
|
// Construct dimensioned fields
|
|
PtrList<const volScalarField::Internal> dScalarFld;
|
|
PtrList<const volVectorField::Internal> dVectorFld;
|
|
PtrList<const volSphericalTensorField::Internal> dSphTensorFld;
|
|
PtrList<const volSymmTensorField::Internal> dSymTensorFld;
|
|
PtrList<const volTensorField::Internal> dTensorFld;
|
|
|
|
if (!specifiedFields || selectedFields.size())
|
|
{
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
dScalarFld
|
|
);
|
|
print(" volScalar::Internal :", Info, dScalarFld);
|
|
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
dVectorFld
|
|
);
|
|
print(" volVector::Internal :", Info, dVectorFld);
|
|
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
dSphTensorFld
|
|
);
|
|
print(" volSphericalTensor::Internal :", Info, dSphTensorFld);
|
|
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
dSymTensorFld
|
|
);
|
|
print(" volSymmTensor::Internal :", Info, dSymTensorFld);
|
|
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
dTensorFld
|
|
);
|
|
print(" volTensor::Internal :", Info, dTensorFld);
|
|
}
|
|
|
|
const label nDimFields =
|
|
dScalarFld.size()
|
|
+ dVectorFld.size()
|
|
+ dSphTensorFld.size()
|
|
+ dSymTensorFld.size()
|
|
+ dTensorFld.size();
|
|
|
|
|
|
// Construct pointMesh only if necessary since constructs edge
|
|
// addressing (expensive on polyhedral meshes)
|
|
if (noPointValues)
|
|
{
|
|
Info<< " pointScalarFields : switched off"
|
|
<< " (\"-noPointValues\" (at your option)\n";
|
|
Info<< " pointVectorFields : switched off"
|
|
<< " (\"-noPointValues\" (at your option)\n";
|
|
}
|
|
|
|
PtrList<const pointScalarField> pScalarFld;
|
|
PtrList<const pointVectorField> pVectorFld;
|
|
PtrList<const pointSphericalTensorField> pSphTensorFld;
|
|
PtrList<const pointSymmTensorField> pSymTensorFld;
|
|
PtrList<const pointTensorField> pTensorFld;
|
|
|
|
if (!noPointValues && !(specifiedFields && selectedFields.empty()))
|
|
{
|
|
readFields
|
|
(
|
|
meshRef,
|
|
pointMesh::New(meshRef.baseMesh()),
|
|
objects,
|
|
selectedFields,
|
|
pScalarFld
|
|
);
|
|
print(" pointScalar :", Info, pScalarFld);
|
|
|
|
readFields
|
|
(
|
|
meshRef,
|
|
pointMesh::New(meshRef.baseMesh()),
|
|
objects,
|
|
selectedFields,
|
|
pVectorFld
|
|
);
|
|
print(" pointVector :", Info, pVectorFld);
|
|
|
|
readFields
|
|
(
|
|
meshRef,
|
|
pointMesh::New(meshRef.baseMesh()),
|
|
objects,
|
|
selectedFields,
|
|
pSphTensorFld
|
|
);
|
|
print(" pointSphericalTensor :", Info, pSphTensorFld);
|
|
|
|
readFields
|
|
(
|
|
meshRef,
|
|
pointMesh::New(meshRef.baseMesh()),
|
|
objects,
|
|
selectedFields,
|
|
pSymTensorFld
|
|
);
|
|
print(" pointSymmTensor :", Info, pSymTensorFld);
|
|
|
|
readFields
|
|
(
|
|
meshRef,
|
|
pointMesh::New(meshRef.baseMesh()),
|
|
objects,
|
|
selectedFields,
|
|
pTensorFld
|
|
);
|
|
print(" pointTensor :", Info, pTensorFld);
|
|
}
|
|
Info<< endl;
|
|
|
|
const label nPointFields =
|
|
pScalarFld.size()
|
|
+ pVectorFld.size()
|
|
+ pSphTensorFld.size()
|
|
+ pSymTensorFld.size()
|
|
+ pTensorFld.size();
|
|
|
|
if (doWriteInternal)
|
|
{
|
|
if (foamVtkMeshCells.empty())
|
|
{
|
|
foamVtkMeshCells.reset(meshRef.mesh());
|
|
|
|
// Convert cellMap, addPointCellLabels to global cell ids
|
|
if (meshRef.useSubMesh())
|
|
{
|
|
foamVtkMeshCells.renumberCells
|
|
(
|
|
meshRef.subsetter().cellMap()
|
|
);
|
|
}
|
|
}
|
|
|
|
// Create file and write header
|
|
fileName outputName
|
|
(
|
|
fvPath/vtkName
|
|
+ "_"
|
|
+ timeDesc
|
|
);
|
|
Info<< " Internal : "
|
|
<< relativeName(runTime, outputName) << endl;
|
|
|
|
// Write mesh
|
|
foamVtkOutput::internalWriter writer
|
|
(
|
|
meshRef.baseMesh(),
|
|
foamVtkMeshCells,
|
|
outputName,
|
|
fmtType
|
|
);
|
|
|
|
// CellData
|
|
{
|
|
writer.beginCellData(1 + nVolFields + nDimFields);
|
|
|
|
// Write cellID field
|
|
writer.writeCellIDs();
|
|
|
|
// Write volFields
|
|
writer.write(vScalarFld);
|
|
writer.write(vVectorFld);
|
|
writer.write(vSphTensorf);
|
|
writer.write(vSymTensorFld);
|
|
writer.write(vTensorFld);
|
|
|
|
// Write dimensionedFields
|
|
writer.write(dScalarFld);
|
|
writer.write(dVectorFld);
|
|
writer.write(dSphTensorFld);
|
|
writer.write(dSymTensorFld);
|
|
writer.write(dTensorFld);
|
|
|
|
writer.endCellData();
|
|
}
|
|
|
|
// PointData
|
|
if (!noPointValues)
|
|
{
|
|
writer.beginPointData(nVolFields + nDimFields + nPointFields);
|
|
|
|
// pointFields
|
|
writer.write(pScalarFld);
|
|
writer.write(pVectorFld);
|
|
writer.write(pSphTensorFld);
|
|
writer.write(pSymTensorFld);
|
|
writer.write(pTensorFld);
|
|
|
|
// Interpolated volFields
|
|
volPointInterpolation pInterp(mesh);
|
|
writer.write(pInterp, vScalarFld);
|
|
writer.write(pInterp, vVectorFld);
|
|
writer.write(pInterp, vSphTensorf);
|
|
writer.write(pInterp, vSymTensorFld);
|
|
writer.write(pInterp, vTensorFld);
|
|
|
|
writer.write(pInterp, dScalarFld);
|
|
writer.write(pInterp, dVectorFld);
|
|
writer.write(pInterp, dSphTensorFld);
|
|
writer.write(pInterp, dSymTensorFld);
|
|
writer.write(pInterp, dTensorFld);
|
|
|
|
writer.endPointData();
|
|
}
|
|
}
|
|
|
|
//---------------------------------------------------------------------
|
|
//
|
|
// Write surface fields
|
|
//
|
|
//---------------------------------------------------------------------
|
|
|
|
if (args.optionFound("surfaceFields"))
|
|
{
|
|
PtrList<const surfaceScalarField> sScalarFld;
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
sScalarFld
|
|
);
|
|
print(" surfScalar :", Info, sScalarFld);
|
|
|
|
PtrList<const surfaceVectorField> sVectorFld;
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
sVectorFld
|
|
);
|
|
print(" surfVector :", Info, sVectorFld);
|
|
|
|
if (sScalarFld.size())
|
|
{
|
|
// Rework the scalar fields into vector fields.
|
|
const label sz = sVectorFld.size();
|
|
|
|
sVectorFld.setSize(sz + sScalarFld.size());
|
|
|
|
surfaceVectorField n(mesh.Sf()/mesh.magSf());
|
|
|
|
forAll(sScalarFld, i)
|
|
{
|
|
surfaceVectorField* ssfPtr = (sScalarFld[i]*n).ptr();
|
|
ssfPtr->rename(sScalarFld[i].name());
|
|
sVectorFld.set(sz+i, ssfPtr);
|
|
}
|
|
sScalarFld.clear();
|
|
}
|
|
|
|
if (sVectorFld.size())
|
|
{
|
|
mkDir(fvPath / "surfaceFields");
|
|
|
|
fileName outputName
|
|
(
|
|
fvPath
|
|
/ "surfaceFields"
|
|
/ "surfaceFields"
|
|
+ "_"
|
|
+ timeDesc
|
|
);
|
|
|
|
foamVtkOutput::writeSurfFields
|
|
(
|
|
meshRef.mesh(),
|
|
outputName,
|
|
fmtType,
|
|
sVectorFld
|
|
);
|
|
}
|
|
}
|
|
|
|
|
|
//---------------------------------------------------------------------
|
|
//
|
|
// Write patches (POLYDATA file, one for each patch)
|
|
//
|
|
//---------------------------------------------------------------------
|
|
|
|
const polyBoundaryMesh& patches = mesh.boundaryMesh();
|
|
|
|
if (allPatches)
|
|
{
|
|
mkDir(fvPath/"allPatches");
|
|
|
|
fileName outputName
|
|
(
|
|
fvPath/"allPatches"
|
|
/ (meshRef.useSubMesh() ? cellSetName : "allPatches")
|
|
+ "_"
|
|
+ timeDesc
|
|
);
|
|
Info<< " Combined patches : "
|
|
<< relativeName(runTime, outputName) << nl;
|
|
|
|
foamVtkOutput::patchWriter writer
|
|
(
|
|
meshRef.mesh(),
|
|
outputName,
|
|
fmtType,
|
|
nearCellValue,
|
|
getSelectedPatches(patches, excludePatches)
|
|
);
|
|
|
|
// CellData
|
|
{
|
|
writer.beginCellData(1 + nVolFields);
|
|
|
|
// Write patchID field
|
|
writer.writePatchIDs();
|
|
|
|
// Write volFields
|
|
writer.write(vScalarFld);
|
|
writer.write(vVectorFld);
|
|
writer.write(vSphTensorf);
|
|
writer.write(vSymTensorFld);
|
|
writer.write(vTensorFld);
|
|
|
|
writer.endCellData();
|
|
}
|
|
|
|
// PointData
|
|
if (!noPointValues)
|
|
{
|
|
writer.beginPointData(nPointFields);
|
|
|
|
// Write pointFields
|
|
writer.write(pScalarFld);
|
|
writer.write(pVectorFld);
|
|
writer.write(pSphTensorFld);
|
|
writer.write(pSymTensorFld);
|
|
writer.write(pTensorFld);
|
|
|
|
// no interpolated volFields since I cannot be bothered to
|
|
// create the patchInterpolation for all subpatches.
|
|
|
|
writer.endPointData();
|
|
}
|
|
}
|
|
else
|
|
{
|
|
forAll(patches, patchi)
|
|
{
|
|
const polyPatch& pp = patches[patchi];
|
|
|
|
if (findStrings(excludePatches, pp.name()))
|
|
{
|
|
// Skip excluded patch
|
|
continue;
|
|
}
|
|
|
|
mkDir(fvPath/pp.name());
|
|
|
|
fileName outputName
|
|
(
|
|
fvPath/pp.name()
|
|
/ (meshRef.useSubMesh() ? cellSetName : pp.name())
|
|
+ "_"
|
|
+ timeDesc
|
|
);
|
|
Info<< " Patch : "
|
|
<< relativeName(runTime, outputName) << nl;
|
|
|
|
foamVtkOutput::patchWriter writer
|
|
(
|
|
meshRef.mesh(),
|
|
outputName,
|
|
fmtType,
|
|
nearCellValue,
|
|
labelList{patchi}
|
|
);
|
|
|
|
if (!isA<emptyPolyPatch>(pp))
|
|
{
|
|
// VolFields + patchID
|
|
writer.beginCellData(1+nVolFields);
|
|
|
|
// Write patchID field
|
|
writer.writePatchIDs();
|
|
|
|
// Write volFields
|
|
writer.write(vScalarFld);
|
|
writer.write(vVectorFld);
|
|
writer.write(vSphTensorf);
|
|
writer.write(vSymTensorFld);
|
|
writer.write(vTensorFld);
|
|
|
|
writer.endCellData();
|
|
|
|
if (!noPointValues)
|
|
{
|
|
writer.beginPointData(nVolFields + nPointFields);
|
|
|
|
// Write pointFields
|
|
writer.write(pScalarFld);
|
|
writer.write(pVectorFld);
|
|
writer.write(pSphTensorFld);
|
|
writer.write(pSymTensorFld);
|
|
writer.write(pTensorFld);
|
|
|
|
PrimitivePatchInterpolation<primitivePatch> pInter
|
|
(
|
|
pp
|
|
);
|
|
|
|
// Write interpolated volFields
|
|
writer.write(pInter, vScalarFld);
|
|
writer.write(pInter, vVectorFld);
|
|
writer.write(pInter, vSphTensorf);
|
|
writer.write(pInter, vSymTensorFld);
|
|
writer.write(pInter, vTensorFld);
|
|
|
|
writer.endPointData();
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
//---------------------------------------------------------------------
|
|
//
|
|
// Write faceZones (POLYDATA file, one for each zone)
|
|
//
|
|
//---------------------------------------------------------------------
|
|
|
|
if (doFaceZones)
|
|
{
|
|
PtrList<const surfaceScalarField> sScalarFld;
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
sScalarFld
|
|
);
|
|
print(" surfScalar :", Info, sScalarFld);
|
|
|
|
PtrList<const surfaceVectorField> sVectorFld;
|
|
readFields
|
|
(
|
|
meshRef,
|
|
meshRef.baseMesh(),
|
|
objects,
|
|
selectedFields,
|
|
sVectorFld
|
|
);
|
|
print(" surfVector :", Info, sVectorFld);
|
|
|
|
const faceZoneMesh& zones = mesh.faceZones();
|
|
|
|
forAll(zones, zoneI)
|
|
{
|
|
const faceZone& fz = zones[zoneI];
|
|
|
|
mkDir(fvPath/fz.name());
|
|
|
|
fileName outputName =
|
|
(
|
|
fvPath/fz.name()
|
|
/ (meshRef.useSubMesh() ? cellSetName : fz.name())
|
|
+ "_"
|
|
+ timeDesc
|
|
);
|
|
Info<< " FaceZone : "
|
|
<< relativeName(runTime, outputName) << nl;
|
|
|
|
indirectPrimitivePatch pp
|
|
(
|
|
IndirectList<face>(mesh.faces(), fz),
|
|
mesh.points()
|
|
);
|
|
|
|
foamVtkOutput::surfaceMeshWriter writer
|
|
(
|
|
pp,
|
|
fz.name(),
|
|
outputName,
|
|
fmtType
|
|
);
|
|
|
|
// Number of fields
|
|
writer.beginCellData(sScalarFld.size() + sVectorFld.size());
|
|
|
|
writer.write(sScalarFld);
|
|
writer.write(sVectorFld);
|
|
|
|
writer.endCellData();
|
|
}
|
|
}
|
|
|
|
|
|
//---------------------------------------------------------------------
|
|
//
|
|
// Write lagrangian data
|
|
//
|
|
//---------------------------------------------------------------------
|
|
|
|
forAll(cloudNames, cloudNo)
|
|
{
|
|
const fileName& cloudName = cloudNames[cloudNo];
|
|
|
|
// Always create the cloud directory.
|
|
mkDir(fvPath/cloud::prefix/cloudName);
|
|
|
|
fileName outputName
|
|
(
|
|
fvPath/cloud::prefix/cloudName/cloudName
|
|
+ "_" + timeDesc
|
|
);
|
|
Info<< " Lagrangian: "
|
|
<< relativeName(runTime, outputName) << nl;
|
|
|
|
IOobjectList sprayObjs
|
|
(
|
|
mesh,
|
|
runTime.timeName(),
|
|
cloud::prefix/cloudName
|
|
);
|
|
|
|
if (sprayObjs.found("positions"))
|
|
{
|
|
wordList labelNames(sprayObjs.names(labelIOField::typeName));
|
|
Info<< " labels :";
|
|
print(Info, labelNames);
|
|
|
|
wordList scalarNames(sprayObjs.names(scalarIOField::typeName));
|
|
Info<< " scalars :";
|
|
print(Info, scalarNames);
|
|
|
|
wordList vectorNames(sprayObjs.names(vectorIOField::typeName));
|
|
Info<< " vectors :";
|
|
print(Info, vectorNames);
|
|
|
|
wordList sphereNames
|
|
(
|
|
sprayObjs.names
|
|
(
|
|
sphericalTensorIOField::typeName
|
|
)
|
|
);
|
|
Info<< " spherical tensors :";
|
|
print(Info, sphereNames);
|
|
|
|
wordList symmNames
|
|
(
|
|
sprayObjs.names
|
|
(
|
|
symmTensorIOField::typeName
|
|
)
|
|
);
|
|
Info<< " symm tensors :";
|
|
print(Info, symmNames);
|
|
|
|
wordList tensorNames(sprayObjs.names(tensorIOField::typeName));
|
|
Info<< " tensors :";
|
|
print(Info, tensorNames);
|
|
|
|
foamVtkOutput::lagrangianWriter writer
|
|
(
|
|
meshRef.mesh(),
|
|
cloudName,
|
|
outputName,
|
|
fmtType
|
|
);
|
|
|
|
// Write number of fields
|
|
writer.beginParcelData
|
|
(
|
|
labelNames.size()
|
|
+ scalarNames.size()
|
|
+ vectorNames.size()
|
|
+ sphereNames.size()
|
|
+ symmNames.size()
|
|
+ tensorNames.size()
|
|
);
|
|
|
|
// Fields
|
|
writer.writeIOField<label>(labelNames);
|
|
writer.writeIOField<scalar>(scalarNames);
|
|
writer.writeIOField<vector>(vectorNames);
|
|
writer.writeIOField<sphericalTensor>(sphereNames);
|
|
writer.writeIOField<symmTensor>(symmNames);
|
|
writer.writeIOField<tensor>(tensorNames);
|
|
|
|
writer.endParcelData();
|
|
}
|
|
else
|
|
{
|
|
foamVtkOutput::lagrangianWriter writer
|
|
(
|
|
meshRef.mesh(),
|
|
cloudName,
|
|
outputName,
|
|
fmtType,
|
|
true
|
|
);
|
|
|
|
// Write number of fields
|
|
writer.beginParcelData(0);
|
|
|
|
writer.endParcelData();
|
|
}
|
|
}
|
|
|
|
Info<< "Wrote in "
|
|
<< timer.cpuTimeIncrement() << " s, "
|
|
<< mem.update().size() << " kB" << endl;
|
|
}
|
|
|
|
|
|
//---------------------------------------------------------------------
|
|
//
|
|
// Link parallel outputs back to undecomposed case for ease of loading
|
|
//
|
|
//---------------------------------------------------------------------
|
|
|
|
if (Pstream::parRun() && doLinks)
|
|
{
|
|
mkDir(runTime.path()/".."/"VTK");
|
|
chDir(runTime.path()/".."/"VTK");
|
|
|
|
Info<< "Linking all processor files to " << runTime.path()/".."/"VTK"
|
|
<< endl;
|
|
|
|
// Get list of vtk files
|
|
fileName procVTK
|
|
(
|
|
fileName("..")
|
|
/ "processor" + Foam::name(Pstream::myProcNo())
|
|
/ "VTK"
|
|
);
|
|
|
|
fileNameList dirs(readDir(procVTK, fileName::DIRECTORY));
|
|
label sz = dirs.size();
|
|
dirs.setSize(sz+1);
|
|
dirs[sz] = ".";
|
|
|
|
forAll(dirs, i)
|
|
{
|
|
fileNameList subFiles(readDir(procVTK/dirs[i], fileName::FILE));
|
|
|
|
forAll(subFiles, j)
|
|
{
|
|
fileName procFile(procVTK/dirs[i]/subFiles[j]);
|
|
|
|
if (exists(procFile))
|
|
{
|
|
// Could likely also use Foam::ln() directly
|
|
List<string> cmd
|
|
{
|
|
"ln",
|
|
"-s",
|
|
procFile,
|
|
(
|
|
"processor"
|
|
+ Foam::name(Pstream::myProcNo())
|
|
+ "_"
|
|
+ procFile.name()
|
|
)
|
|
};
|
|
|
|
if (Foam::system(cmd) == -1)
|
|
{
|
|
WarningInFunction
|
|
<< "Could not execute command " << cmd << endl;
|
|
}
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
Info<< "\nEnd: "
|
|
<< timer.elapsedCpuTime() << " s, "
|
|
<< mem.update().peak() << " kB (peak)\n" << endl;
|
|
|
|
return 0;
|
|
}
|
|
|
|
|
|
// ************************************************************************* //
|