846 lines
27 KiB
C
846 lines
27 KiB
C
/*---------------------------------------------------------------------------*\
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========= |
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\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
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\\ / O peration |
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\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
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\\/ M anipulation |
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-------------------------------------------------------------------------------
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License
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This file is part of OpenFOAM.
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OpenFOAM is free software: you can redistribute it and/or modify it
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under the terms of the GNU General Public License as published by
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the Free Software Foundation, either version 3 of the License, or
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(at your option) any later version.
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OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
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ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
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FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
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for more details.
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You should have received a copy of the GNU General Public License
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along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
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Application
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reconstructPar
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Description
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Reconstructs fields of a case that is decomposed for parallel
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execution of OpenFOAM.
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\*---------------------------------------------------------------------------*/
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#include "argList.H"
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#include "timeSelector.H"
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#include "fvCFD.H"
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#include "IOobjectList.H"
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#include "processorMeshes.H"
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#include "regionProperties.H"
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#include "fvFieldReconstructor.H"
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#include "pointFieldReconstructor.H"
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#include "reconstructLagrangian.H"
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#include "cellSet.H"
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#include "faceSet.H"
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#include "pointSet.H"
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// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
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bool haveAllTimes
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(
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const HashSet<word>& masterTimeDirSet,
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const instantList& timeDirs
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)
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{
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// Loop over all times
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forAll(timeDirs, timeI)
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{
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if (!masterTimeDirSet.found(timeDirs[timeI].name()))
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{
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return false;
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}
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}
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return true;
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}
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int main(int argc, char *argv[])
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{
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argList::addNote
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(
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"Reconstruct fields of a parallel case"
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);
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// enable -constant ... if someone really wants it
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// enable -zeroTime to prevent accidentally trashing the initial fields
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timeSelector::addOptions(true, true);
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argList::noParallel();
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#include "addRegionOption.H"
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argList::addBoolOption
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(
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"allRegions",
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"operate on all regions in regionProperties"
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);
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argList::addOption
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(
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"fields",
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"list",
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"specify a list of fields to be reconstructed. Eg, '(U T p)' - "
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"regular expressions not currently supported"
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);
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argList::addOption
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(
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"lagrangianFields",
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"list",
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"specify a list of lagrangian fields to be reconstructed. Eg, '(U d)' -"
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"regular expressions not currently supported, "
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"positions always included."
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);
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argList::addBoolOption
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(
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"noLagrangian",
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"skip reconstructing lagrangian positions and fields"
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);
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argList::addBoolOption
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(
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"sets",
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"reconstruct cellSets, faceSets, pointSets"
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);
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argList::addBoolOption
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(
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"newTimes",
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"only reconstruct new times (i.e. that do not exist already)"
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);
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#include "setRootCase.H"
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#include "createTime.H"
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HashSet<word> selectedFields;
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if (args.optionFound("fields"))
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{
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args.optionLookup("fields")() >> selectedFields;
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}
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const bool reconstructSets = args.optionFound("sets");
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const bool noLagrangian = args.optionFound("noLagrangian");
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HashSet<word> selectedLagrangianFields;
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if (args.optionFound("lagrangianFields"))
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{
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if (noLagrangian)
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{
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FatalErrorIn(args.executable())
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<< "Cannot specify noLagrangian and lagrangianFields "
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<< "options together."
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<< exit(FatalError);
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}
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args.optionLookup("lagrangianFields")() >> selectedLagrangianFields;
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}
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const bool newTimes = args.optionFound("newTimes");
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const bool allRegions = args.optionFound("allRegions");
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// determine the processor count directly
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label nProcs = 0;
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while (isDir(args.path()/(word("processor") + name(nProcs))))
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{
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++nProcs;
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}
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if (!nProcs)
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{
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FatalErrorIn(args.executable())
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<< "No processor* directories found"
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<< exit(FatalError);
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}
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// Create the processor databases
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PtrList<Time> databases(nProcs);
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forAll(databases, procI)
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{
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databases.set
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(
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procI,
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new Time
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(
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Time::controlDictName,
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args.rootPath(),
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args.caseName()/fileName(word("processor") + name(procI))
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)
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);
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}
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// use the times list from the master processor
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// and select a subset based on the command-line options
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instantList timeDirs = timeSelector::select
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(
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databases[0].times(),
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args
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);
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if (timeDirs.empty())
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{
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FatalErrorIn(args.executable())
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<< "No times selected"
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<< exit(FatalError);
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}
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// Get current times if -newTimes
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instantList masterTimeDirs;
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if (newTimes)
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{
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masterTimeDirs = runTime.times();
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}
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HashSet<word> masterTimeDirSet(2*masterTimeDirs.size());
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forAll(masterTimeDirs, i)
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{
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masterTimeDirSet.insert(masterTimeDirs[i].name());
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}
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// Set all times on processor meshes equal to reconstructed mesh
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forAll(databases, procI)
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{
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databases[procI].setTime(runTime.timeName(), runTime.timeIndex());
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}
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wordList regionNames;
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wordList regionDirs;
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if (allRegions)
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{
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Info<< "Reconstructing for all regions in regionProperties" << nl
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<< endl;
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regionProperties rp(runTime);
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forAllConstIter(HashTable<wordList>, rp, iter)
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{
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const wordList& regions = iter();
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forAll(regions, i)
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{
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if (findIndex(regionNames, regions[i]) == -1)
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{
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regionNames.append(regions[i]);
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}
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}
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}
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regionDirs = regionNames;
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}
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else
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{
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word regionName;
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if (args.optionReadIfPresent("region", regionName))
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{
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regionNames = wordList(1, regionName);
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regionDirs = regionNames;
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}
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else
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{
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regionNames = wordList(1, fvMesh::defaultRegion);
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regionDirs = wordList(1, word::null);
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}
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}
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forAll(regionNames, regionI)
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{
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const word& regionName = regionNames[regionI];
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const word& regionDir = regionDirs[regionI];
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Info<< "\n\nReconstructing fields for mesh " << regionName << nl
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<< endl;
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if
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(
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newTimes
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&& regionNames.size() == 1
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&& regionDirs[0].empty()
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&& haveAllTimes(masterTimeDirSet, timeDirs)
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)
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{
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Info<< "Skipping region " << regionName
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<< " since already have all times"
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<< endl << endl;
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continue;
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}
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fvMesh mesh
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(
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IOobject
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(
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regionName,
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runTime.timeName(),
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runTime,
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Foam::IOobject::MUST_READ
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)
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);
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// Read all meshes and addressing to reconstructed mesh
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processorMeshes procMeshes(databases, regionName);
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// check face addressing for meshes that have been decomposed
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// with a very old foam version
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#include "checkFaceAddressingComp.H"
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// Loop over all times
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forAll(timeDirs, timeI)
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{
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if (newTimes && masterTimeDirSet.found(timeDirs[timeI].name()))
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{
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Info<< "Skipping time " << timeDirs[timeI].name()
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<< endl << endl;
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continue;
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}
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// Set time for global database
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runTime.setTime(timeDirs[timeI], timeI);
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Info<< "Time = " << runTime.timeName() << endl << endl;
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// Set time for all databases
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forAll(databases, procI)
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{
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databases[procI].setTime(timeDirs[timeI], timeI);
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}
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// Check if any new meshes need to be read.
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fvMesh::readUpdateState meshStat = mesh.readUpdate();
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fvMesh::readUpdateState procStat = procMeshes.readUpdate();
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if (procStat == fvMesh::POINTS_MOVED)
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{
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// Reconstruct the points for moving mesh cases and write
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// them out
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procMeshes.reconstructPoints(mesh);
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}
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else if (meshStat != procStat)
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{
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WarningIn(args.executable())
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<< "readUpdate for the reconstructed mesh:"
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<< meshStat << nl
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<< "readUpdate for the processor meshes :"
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<< procStat << nl
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<< "These should be equal or your addressing"
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<< " might be incorrect."
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<< " Please check your time directories for any "
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<< "mesh directories." << endl;
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}
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// Get list of objects from processor0 database
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IOobjectList objects
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(
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procMeshes.meshes()[0],
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databases[0].timeName()
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);
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{
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// If there are any FV fields, reconstruct them
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Info<< "Reconstructing FV fields" << nl << endl;
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fvFieldReconstructor fvReconstructor
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(
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mesh,
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procMeshes.meshes(),
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procMeshes.faceProcAddressing(),
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procMeshes.cellProcAddressing(),
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procMeshes.boundaryProcAddressing()
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);
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fvReconstructor.reconstructFvVolumeInternalFields<scalar>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvVolumeInternalFields<vector>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvVolumeInternalFields
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<sphericalTensor>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvVolumeInternalFields<symmTensor>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvVolumeInternalFields<tensor>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvVolumeFields<scalar>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvVolumeFields<vector>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvVolumeFields<sphericalTensor>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvVolumeFields<symmTensor>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvVolumeFields<tensor>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvSurfaceFields<scalar>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvSurfaceFields<vector>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvSurfaceFields<sphericalTensor>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvSurfaceFields<symmTensor>
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(
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objects,
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selectedFields
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);
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fvReconstructor.reconstructFvSurfaceFields<tensor>
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(
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objects,
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selectedFields
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);
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if (fvReconstructor.nReconstructed() == 0)
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{
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Info<< "No FV fields" << nl << endl;
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}
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}
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{
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Info<< "Reconstructing point fields" << nl << endl;
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const pointMesh& pMesh = pointMesh::New(mesh);
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PtrList<pointMesh> pMeshes(procMeshes.meshes().size());
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forAll(pMeshes, procI)
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{
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pMeshes.set
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(
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procI,
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new pointMesh(procMeshes.meshes()[procI])
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);
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}
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pointFieldReconstructor pointReconstructor
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(
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pMesh,
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pMeshes,
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procMeshes.pointProcAddressing(),
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procMeshes.boundaryProcAddressing()
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);
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pointReconstructor.reconstructFields<scalar>
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(
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objects,
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selectedFields
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);
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pointReconstructor.reconstructFields<vector>
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(
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objects,
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selectedFields
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);
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pointReconstructor.reconstructFields<sphericalTensor>
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(
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objects,
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selectedFields
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);
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pointReconstructor.reconstructFields<symmTensor>
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(
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objects,
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selectedFields
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);
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pointReconstructor.reconstructFields<tensor>
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(
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objects,
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selectedFields
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);
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if (pointReconstructor.nReconstructed() == 0)
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{
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Info<< "No point fields" << nl << endl;
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}
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}
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// If there are any clouds, reconstruct them.
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// The problem is that a cloud of size zero will not get written so
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// in pass 1 we determine the cloud names and per cloud name the
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// fields. Note that the fields are stored as IOobjectList from
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// the first processor that has them. They are in pass2 only used
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// for name and type (scalar, vector etc).
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if (!noLagrangian)
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{
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HashTable<IOobjectList> cloudObjects;
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forAll(databases, procI)
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{
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fileNameList cloudDirs
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(
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readDir
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|
(
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databases[procI].timePath()
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/ regionDir
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/ cloud::prefix,
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fileName::DIRECTORY
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)
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);
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forAll(cloudDirs, i)
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{
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// Check if we already have cloud objects for this
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// cloudname
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HashTable<IOobjectList>::const_iterator iter =
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cloudObjects.find(cloudDirs[i]);
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if (iter == cloudObjects.end())
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{
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// Do local scan for valid cloud objects
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IOobjectList sprayObjs
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(
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procMeshes.meshes()[procI],
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databases[procI].timeName(),
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cloud::prefix/cloudDirs[i]
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);
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IOobject* positionsPtr =
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sprayObjs.lookup(word("positions"));
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if (positionsPtr)
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{
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cloudObjects.insert(cloudDirs[i], sprayObjs);
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}
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}
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}
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}
|
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|
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if (cloudObjects.size())
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{
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// Pass2: reconstruct the cloud
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forAllConstIter(HashTable<IOobjectList>, cloudObjects, iter)
|
|
{
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const word cloudName = string::validate<word>
|
|
(
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iter.key()
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);
|
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|
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// Objects (on arbitrary processor)
|
|
const IOobjectList& sprayObjs = iter();
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|
Info<< "Reconstructing lagrangian fields for cloud "
|
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<< cloudName << nl << endl;
|
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reconstructLagrangianPositions
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|
(
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mesh,
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cloudName,
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procMeshes.meshes(),
|
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procMeshes.faceProcAddressing(),
|
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procMeshes.cellProcAddressing()
|
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);
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reconstructLagrangianFields<label>
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|
(
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cloudName,
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mesh,
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procMeshes.meshes(),
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sprayObjs,
|
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selectedLagrangianFields
|
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);
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reconstructLagrangianFieldFields<label>
|
|
(
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cloudName,
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mesh,
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procMeshes.meshes(),
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sprayObjs,
|
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selectedLagrangianFields
|
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);
|
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reconstructLagrangianFields<scalar>
|
|
(
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cloudName,
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mesh,
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procMeshes.meshes(),
|
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sprayObjs,
|
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selectedLagrangianFields
|
|
);
|
|
reconstructLagrangianFieldFields<scalar>
|
|
(
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cloudName,
|
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mesh,
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procMeshes.meshes(),
|
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sprayObjs,
|
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selectedLagrangianFields
|
|
);
|
|
reconstructLagrangianFields<vector>
|
|
(
|
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cloudName,
|
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mesh,
|
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procMeshes.meshes(),
|
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sprayObjs,
|
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selectedLagrangianFields
|
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);
|
|
reconstructLagrangianFieldFields<vector>
|
|
(
|
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cloudName,
|
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mesh,
|
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procMeshes.meshes(),
|
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sprayObjs,
|
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selectedLagrangianFields
|
|
);
|
|
reconstructLagrangianFields<sphericalTensor>
|
|
(
|
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cloudName,
|
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mesh,
|
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procMeshes.meshes(),
|
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sprayObjs,
|
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selectedLagrangianFields
|
|
);
|
|
reconstructLagrangianFieldFields<sphericalTensor>
|
|
(
|
|
cloudName,
|
|
mesh,
|
|
procMeshes.meshes(),
|
|
sprayObjs,
|
|
selectedLagrangianFields
|
|
);
|
|
reconstructLagrangianFields<symmTensor>
|
|
(
|
|
cloudName,
|
|
mesh,
|
|
procMeshes.meshes(),
|
|
sprayObjs,
|
|
selectedLagrangianFields
|
|
);
|
|
reconstructLagrangianFieldFields<symmTensor>
|
|
(
|
|
cloudName,
|
|
mesh,
|
|
procMeshes.meshes(),
|
|
sprayObjs,
|
|
selectedLagrangianFields
|
|
);
|
|
reconstructLagrangianFields<tensor>
|
|
(
|
|
cloudName,
|
|
mesh,
|
|
procMeshes.meshes(),
|
|
sprayObjs,
|
|
selectedLagrangianFields
|
|
);
|
|
reconstructLagrangianFieldFields<tensor>
|
|
(
|
|
cloudName,
|
|
mesh,
|
|
procMeshes.meshes(),
|
|
sprayObjs,
|
|
selectedLagrangianFields
|
|
);
|
|
}
|
|
}
|
|
else
|
|
{
|
|
Info<< "No lagrangian fields" << nl << endl;
|
|
}
|
|
}
|
|
|
|
|
|
if (reconstructSets)
|
|
{
|
|
// Scan to find all sets
|
|
HashTable<label> cSetNames;
|
|
HashTable<label> fSetNames;
|
|
HashTable<label> pSetNames;
|
|
|
|
forAll(procMeshes.meshes(), procI)
|
|
{
|
|
const fvMesh& procMesh = procMeshes.meshes()[procI];
|
|
|
|
IOobjectList objects
|
|
(
|
|
procMesh, procMesh.facesInstance(), "polyMesh/sets"
|
|
);
|
|
IOobjectList cSets(objects.lookupClass(cellSet::typeName));
|
|
forAllConstIter(IOobjectList, cSets, iter)
|
|
{
|
|
cSetNames.insert(iter.key(), cSetNames.size());
|
|
}
|
|
|
|
IOobjectList fSets(objects.lookupClass(faceSet::typeName));
|
|
forAllConstIter(IOobjectList, fSets, iter)
|
|
{
|
|
fSetNames.insert(iter.key(), fSetNames.size());
|
|
}
|
|
IOobjectList pSets(objects.lookupClass(pointSet::typeName));
|
|
forAllConstIter(IOobjectList, pSets, iter)
|
|
{
|
|
pSetNames.insert(iter.key(), pSetNames.size());
|
|
}
|
|
}
|
|
|
|
// Construct all sets
|
|
PtrList<cellSet> cellSets(cSetNames.size());
|
|
PtrList<faceSet> faceSets(fSetNames.size());
|
|
PtrList<pointSet> pointSets(pSetNames.size());
|
|
|
|
// Load sets
|
|
forAll(procMeshes.meshes(), procI)
|
|
{
|
|
const fvMesh& procMesh = procMeshes.meshes()[procI];
|
|
|
|
IOobjectList objects
|
|
(
|
|
procMesh, procMesh.facesInstance(), "polyMesh/sets"
|
|
);
|
|
|
|
// cellSets
|
|
const labelList& cellMap =
|
|
procMeshes.cellProcAddressing()[procI];
|
|
|
|
IOobjectList cSets(objects.lookupClass(cellSet::typeName));
|
|
forAllConstIter(IOobjectList, cSets, iter)
|
|
{
|
|
// Load cellSet
|
|
const cellSet procSet(*iter());
|
|
label setI = cSetNames[iter.key()];
|
|
if (!cellSets.set(setI))
|
|
{
|
|
cellSets.set
|
|
(
|
|
setI,
|
|
new cellSet(mesh, iter.key(), procSet.size())
|
|
);
|
|
}
|
|
cellSet& cSet = cellSets[setI];
|
|
|
|
forAllConstIter(cellSet, procSet, iter)
|
|
{
|
|
cSet.insert(cellMap[iter.key()]);
|
|
}
|
|
}
|
|
|
|
// faceSets
|
|
const labelList& faceMap =
|
|
procMeshes.faceProcAddressing()[procI];
|
|
|
|
IOobjectList fSets(objects.lookupClass(faceSet::typeName));
|
|
forAllConstIter(IOobjectList, fSets, iter)
|
|
{
|
|
// Load faceSet
|
|
const faceSet procSet(*iter());
|
|
label setI = fSetNames[iter.key()];
|
|
if (!faceSets.set(setI))
|
|
{
|
|
faceSets.set
|
|
(
|
|
setI,
|
|
new faceSet(mesh, iter.key(), procSet.size())
|
|
);
|
|
}
|
|
faceSet& fSet = faceSets[setI];
|
|
|
|
forAllConstIter(faceSet, procSet, iter)
|
|
{
|
|
fSet.insert(mag(faceMap[iter.key()])-1);
|
|
}
|
|
}
|
|
// pointSets
|
|
const labelList& pointMap =
|
|
procMeshes.pointProcAddressing()[procI];
|
|
|
|
IOobjectList pSets(objects.lookupClass(pointSet::typeName));
|
|
forAllConstIter(IOobjectList, pSets, iter)
|
|
{
|
|
// Load pointSet
|
|
const pointSet propSet(*iter());
|
|
label setI = pSetNames[iter.key()];
|
|
if (!pointSets.set(setI))
|
|
{
|
|
pointSets.set
|
|
(
|
|
setI,
|
|
new pointSet(mesh, iter.key(), propSet.size())
|
|
);
|
|
}
|
|
pointSet& pSet = pointSets[setI];
|
|
|
|
forAllConstIter(pointSet, propSet, iter)
|
|
{
|
|
pSet.insert(pointMap[iter.key()]);
|
|
}
|
|
}
|
|
}
|
|
|
|
// Write sets
|
|
forAll(cellSets, i)
|
|
{
|
|
cellSets[i].write();
|
|
}
|
|
forAll(faceSets, i)
|
|
{
|
|
faceSets[i].write();
|
|
}
|
|
forAll(pointSets, i)
|
|
{
|
|
pointSets[i].write();
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
// If there are any "uniform" directories copy them from
|
|
// the master processor
|
|
forAll(timeDirs, timeI)
|
|
{
|
|
fileName uniformDir0 = databases[0].timePath()/"uniform";
|
|
if (isDir(uniformDir0))
|
|
{
|
|
cp(uniformDir0, runTime.timePath());
|
|
}
|
|
}
|
|
|
|
Info<< "End.\n" << endl;
|
|
|
|
return 0;
|
|
}
|
|
|
|
|
|
// ************************************************************************* //
|