openfoam/doc/Requirements.md
2019-11-19 16:15:01 +01:00

5.9 KiB

OpenFOAM® System Requirements

OpenFOAM requires a functioning C++11 compiler and make build toolchain.

  • gcc : 4.8.5
  • cmake: 3.3 (required for ParaView and CGAL build)
  • boost: 1.48 (required for CGAL build and some functionality)
  • fftw: 3.3.7 (recommended - required for FFT-related functionality)
  • paraview: 5.5.2 (for visualization)

If using the Intel® compiler, 17.0.1 20161005 is the minimum usable version.

To check the installed versions

Program To check the version
gcc gcc --version
icc icc --version
openmpi orterun --version
cmake cmake --version
openmpi orterun --version

Additional utilities

  • flex : not 2.6.2, 2.6.3 (fails for building scotch)
  • m4 : no known minimum level
  • QT : 5.9 (optional - for ParaView build)

Ubuntu (eg, 19.04)

Install dependencies by executing the following lines on the command line:

sudo apt-get install build-essential flex cmake zlib1g-dev libopenmpi-dev openmpi-bin gnuplot libreadline-dev libncurses-dev
sudo apt-get install libgmp-dev libmpfr-dev libmpc-dev

Additional libraries will be required if compiling ParaView from source, however it is suggested to skipped this initially since it generally represent the main compilation difficulty. In many cases, a system installation of paraview or a precompiled binary will be much easier.

Some libraries can be installed from from the operating system, or compiled from the ThirdParty directory. The default configuration for OpenFOAM assumes OpenMPI from the system and ThirdParty installations for most others (boost, CGAL, FFTW, Kahip, Scotch). This is generally the most portable configuration across various Linux distributions, but it may be desirable to use more system libraries on Ubuntu.

To inspect the available system versions, use the apt-cache show command. For example,

sudo apt-cache show fftw3-dev
Program apt-cache show Ubuntu Version
boost libboost-dev 19.04 1.67
CGAL libcgal-dev 19.04 4.13
FFTW libfftw3-dev 19.04 3.3.8
scotch libscotch-dev 19.04 6.0.6
Program Ubuntu Program version
gcc 19.04 8.3.0
openmpi 19.04 3.1.3
cmake 19.04 3.13.4
flex 19.04 2.6.4
m4 15.1 1.4.18

openSUSE (eg, Leap-15.1)

Install the dependencies by copying and pasting the following lines to the command line:

sudo zypper install -t pattern devel_C_C++
sudo zypper install cmake boost-devel mpfr-devel gmp-devel openmpi-devel gnuplot

This installs

Program openSUSE Program version
gcc 15.1 7.4.3
openmpi 15.1 1.10.7
cmake 15.1 3.10.2
flex 15.1 2.6.4
m4 15.1 1.4.18

OpenMPI

Check that the openmpi installation can be found:

orterun --version

And the command mpicc --show should display a complete compilation line. This information is used in OpenFOAM to obtain the compilation and link options.

For openSUSE it is common that this command cannot be found. The reason being that the operating system can have several different MPI vendors and versions installed and the user or sysadmin needs to defined the preferred MPI. For this task, the mpi-selector and mpi-selector-menu programs are used. These are automatically installed by the system when openmpi has been installed.

If openmpi has been selected, the output will resemble the following:

$ mpi-selector --query

default:openmpi
level:user

If this is not the case, the mpi-selector-menu can be used to define the preferred default.

Note that changes in the preferred MPI do not take effect until the next login.

If all else fails, a brute force solution can also be used by simply adding the corresponding lines to the $HOME/.bashrc file:

export PATH=$PATH:/usr/lib64/mpi/gcc/openmpi/bin
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/lib64/mpi/gcc/openmpi/lib

This solution is not particularly nice, but may also be necessary if some other part of the operating system installation is incomplete.

Using IntelMPI

To run with IntelMPI, the LD_PRELOAD environment variable can be used to pre-load the appropriate Intel® MPI binding library. For more details, see INTELMPI release note page 13. The following line can be the $HOME/.bashrc file:

export LD_PRELOAD="libmpi.so"

Additional libraries

When compiled ParaView from source additional dependencies will be required. A partial list is given in the ThirdParty requirements. Please help us with keeping that information up-to-date and accurate.


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