Commit Graph

2044 Commits

Author SHA1 Message Date
mattijs
ba9e573812 ENH: redistributePar: single-step. See #1211
- single-step for reconstructParMesh
- no point merging for redistributePar -reconstruct
2021-03-08 11:01:57 +00:00
Mark Olesen
f8a0677a66 ENH: replace base implementation of Foam::Swap with std::swap
- eliminates a potentially invalid code branch.
  Since it essentially had the same internals as std::swap anyhow,
  make that more evident.

ENH: use std::swap for basic types

- makes it clearer that they do not rely on any special semantics
2021-02-16 14:30:36 +01:00
Mark Olesen
e71bf4445a GIT: fix edit errors 2021-02-10 12:43:07 +01:00
Mark Olesen
6cdf89dced ENH: use concise forms for walking processor and cyclic boundaries 2021-02-09 17:57:49 +01:00
Mark Olesen
902f09b688 ENH: IOobject for header generation, preserve output format in datToFoam 2021-01-26 09:42:26 +01:00
mattijs
a2bc1fd3a6 BUG: extrudeMesh: revert previous fix. see #1964
The polyMesh construct-from-components will now ignore
the readOpt for the supplied primitives as before.
This again re-allows READ_IF_PRESENT for fv* in
combination with supplied primitives.
2020-12-21 17:25:56 +00:00
Mattijs Janssens
6d6c204745 BUG: extrudeMesh - partial fix for incorrect behaviour - see #1964
Changed IO flag so that new mesh is created
- was using old 'faces', 'owner' etc but then used the new patch starts

Corrected logic for contMap in polyTopoChange
2020-12-18 17:42:20 +00:00
Mark Olesen
cf3d983b80 ENH: add treatment for PDRblockMesh outer region expansions (#1906)
// Treatment of the outer region
   outer
   {
       type        sphere;
       onGround    true;
       expansion   relative;

       ratios      1.1;

       size        3;
       nCells      10;
   }
2020-12-11 20:24:25 +00:00
Mattijs Janssens
46dbfabd9d ENH: primitiveMesh: make geometry calculation runtime selectable
This adds a 'geometry' scheme section to the system/fvSchemes:

geometry
{
    type            highAspectRatio;
}

These 'fvGeometryMethod's are used to calculate
- deltaCoeffs
- nonOrthoCoeffs
etc and can even modify the basic face/cellCentres calculation.
2020-12-11 10:31:34 +00:00
Mark Olesen
be783632f2 ENH: isoSurfaceParams
- bundles selection and control parameters used when creating
  iso-surfaces. This simplifies selection and specification

- drop old compatibility handling of "cell" as a bool

- harmonize filter/regularisation flags for iso-surface

- for dictionary input, accept "isoMethod" and "isoAlgorithm" as being
  synonymous. Using "isoMethod" is less subject to typing errors.
2020-12-08 13:31:22 +01:00
Mark Olesen
b966b7cd4b ENH: static test methods for matching simple cell shapes
- (tet, pyr, hex) can be identified from their number of faces
  and vertices. For these common shapes can use static `test()`
  method instead of the virtual isA() method.

  This is much cheaper for calling on an individual basis since
  it avoids the overhead of constructing an object.

ENH: tetCell edge/reverseEdge (already had tetEdge)
2020-12-08 11:58:27 +01:00
Mark Olesen
b4eb214d56 BUG: transformPoints flagged zero or negative scaling as an error
- additional check was introduced by 51b2490258, but scaling with
  zero is useful for flattening a mesh
2020-11-26 01:04:55 +01:00
Mark Olesen
52c6642a4c Merge remote-tracking branch 'origin/master' into develop 2020-11-25 21:30:49 +01:00
Mark Olesen
7349b97ecc STYLE: use labelRange for identity 2020-11-25 19:53:02 +01:00
mattijs
ae49b51182 ENH: improve offsets handling in extrudeToRegionMesh (#1933)
- non-uniform offsets are generated due to truncation errors,
  which can lead to problems later on (e.g. redistributePar).

  Detect if the offsets are close to being uniform.
2020-11-25 19:53:02 +01:00
Mark Olesen
07bbae0c55 STYLE: use brace constructors for Foam::zero and Foam::one
- makes it clearer that these are constructors and not function calls
2020-11-19 16:57:45 +01:00
Mark Olesen
6dd2cc808e CONFIG: provisional cuda rule. Update naming for CGAL rules 2020-11-17 21:29:07 +01:00
Mark Olesen
bed1305d96 BUG: extraneous brackets after Fluent cell types (fixes #1872)
ENH: limit output to 25 cell types per line for readability

- makes it easier to trace potential format errors etc

STYLE: downgrade warning about polyhedrals to a simple info message

- can assume that polyhedral support is widespread enough to not
  warrant a warning.
2020-10-29 11:21:39 +01:00
Mark Olesen
f959c8eb36 ENH: generate local orientation vectors for blockMesh VTK output (#1903)
- can help when designing/debugging blockMesh layouts

- propagate low-level cellModel methods face() and edge() to cellShape

STYLE: relocate blockMesh OBJ output to application only

- remove blockTopology files in cleanCase function

- improve code consistency in top-level blockMesh, PDRblockMesh
  generation.
2020-10-28 16:04:12 +01:00
Mark Olesen
9eb73a92e2 TUT: fix use of "constant/triSurface" etc (#1887)
- use bracketed syntax (eg, "<constant>/triSurface") instead for
  implicit case resolution.
2020-10-28 16:04:12 +01:00
Mark Olesen
51b2490258 ENH: additional options for transformPoints and surfaceRefineRedGreen
- add -recentre option to shift points according to the bounding box
  centre before performing other operations

- add -auto-origin to use the bounding box centre as the origin for
  rotations. Has lower priority than the -origin option.

- surfaceTransformPoints now has distinct -read-scale, -write-scale
  options (as per surfaceMeshConvert). Silently accepts -scale as
  equivalent to -write-scale, for backwards compatibility and
  similarity with transformPoints

- add -steps option for surfaceRefineRedGreen for successive
  refinement
2020-10-22 14:59:12 +02:00
Mark Olesen
132ae101f6 COMP: avoid autoPtr copy assignment and implicit casting 2020-10-15 17:21:33 +02:00
Mark Olesen
9c7aa9727a ENH: add UPstream::parRun(const bool)
- slightly neater code when disabling/restoring parallel state

  New
      const bool oldParRun = Pstream::parRun(false);
      ...
      Pstream::parRun(oldParRun);

  Old
      const bool oldParRun = Pstream::parRun();
      Pstream::parRun() = false;
      ...
      Pstream::parRun() = oldParRun;
2020-10-12 12:51:22 +02:00
Mark Olesen
8939a55653 ENH: relocate blockMesh polyMesh generation into library (for code reuse)
STYLE: adjust blockMesh advanced/non-advanced options

- make -merge-points "non-advanced" (for better exposure)
- make -write-obj "advanced" (-write-vtk is preferred)
2020-10-05 12:36:04 +02:00
Mark Olesen
5dc5ea928a ENH: add UPstream::subProcs() static method
- returns a range of `int` values that can be iterated across.
  For example,

      for (const int proci : Pstream::subProcs()) { ... }

  instead of

      for
      (
          int proci = Pstream::firstSlave();
          proci <= Pstream::lastSlave();
          ++proci
      )
      {
          ...
      }
2020-09-28 14:26:07 +02:00
Mark Olesen
e18ff114a6 ENH: add UPstream::allProcs() method
- returns a range of `int` values that can be iterated across.
  For example,

      for (const int proci : Pstream::allProcs()) { ... }

  instead of

      for (label proci = 0; proci < Pstream::nProcs(); ++proci) { ... }
2020-09-28 14:25:59 +02:00
Mark Olesen
9423d2bd83 CONFIG: improve support for compiler/link options (#1830)
- introduce WM_COMPILE_CONTROL variable to convey control information
  into the build rules.

  The convention (as per spack):
      - '+' to select a feature
      - '~' to deselect a feature

  Eg, to select the gold linker, and disable openmp
  (spaces are not required):

      WM_COMPILE_CONTROL="+gold ~openmp"

CONFIG: accept FOAM_EXTRA_LDFLAGS for AMD, gold, Mingw linkers

CONFIG: generalize PROJECT_LIBS (-ldl used almost universally)
2020-09-07 09:45:51 +02:00
Mark Olesen
b2bded48c9 STYLE: use Time::printExecutionTime() method
- makes format of ExecutionTime = ... output configurable (#788)
  and reduces code clutter.

STYLE: more consistent line-breaks after "End" tag
2020-08-07 09:24:56 +02:00
Mark Olesen
74a062d1d5 Merge remote-tracking branch 'origin/master' into develop 2020-07-28 08:42:12 +02:00
Mark Olesen
d5884c8d85 STYLE: use HashSet xor instead of two operations (faceZoneSet)
STYLE: use global operator instead of HashSet -= operator
2020-07-27 09:47:33 +02:00
mattijs
bcda061f54 ENH: checkMesh: improved checking on writeFields. Fixes #1786. 2020-07-23 17:26:09 +01:00
Mark Olesen
12c91b9472 STYLE: check autoPtr as plain bool instead of valid()
- cleaner code, more similarity with unique_ptr

  Now
      if (ptr)
      if (!ptr)

  instead
      if (ptr.valid())
      if (!ptr.valid())
2020-07-16 11:39:24 +02:00
Mark Olesen
9af3f85cf9 STYLE: simplify short-circuit involving autoPtr (#1775)
- with '&&' conditions, often better to check for non-null autoPtr
  first (it is cheap)

- check as bool instead of valid() method for cleaner code, especially
  when the wrapped item itself has a valid/empty or good.
  Also when handling multiple checks.

  Now
      if (ptr && ptr->valid())
      if (ptr1 || ptr2)

  instead
      if (ptr.valid() && ptr->valid())
      if (ptr1.valid() || ptr2.valid())
2020-07-16 10:17:25 +02:00
Mark Olesen
3baebcb101 STYLE: replace uses of autoPtr::empty() with bool check (#1775)
- less clutter using plain tests with the bool operator:

      (!ptr)  vs  (ptr.empty())
      (ptr)   vs  (!ptr.empty())
2020-07-16 08:58:22 +02:00
Mark Olesen
5dc04530d9 COMP: additional linkage libraries for AMD compiler (#1627) 2020-07-14 12:17:09 +02:00
mattijs
a86860430a BUG: checkMesh: index into surfaceScalarField. Fixes #1771. 2020-07-13 13:02:07 +01:00
mattijs
331e86cf17 BUG: checkMesh: index into surfaceScalarField. Fixes #1771. 2020-07-13 13:00:13 +01:00
Mark Olesen
6d965d699b BUG: mergeOrSplitBaffles -dict option ignored (fixes #1759)
- regression from f721b5344f
2020-07-01 18:41:31 +02:00
OpenFOAM bot
01ec92fd35 GIT: remove leading/trailing blank lines, trailing whitespace 2020-06-17 10:46:26 +02:00
Mark Olesen
c1c995d3fe COMP: fix some linkage issues for mingw
COMP: automatically add FlexLexer.h to MSwindows OSspecific

- useful, frequently forgotten step for cross-compiling
2020-06-16 23:56:41 +02:00
Kutalmis Bercin
5cbdb7a3d7 INT: various integrations from openfoam.org
ENH: add log FO
  ENH: improve log with scale, and offset entries
  BUG: ensure extrueMesh does not fail in parallel with wedge extrusion
  BUG: add missing clone and mapping funcs to copiedFixedValue, fixedMultiPhaseHeatFlux
  ENH: meshToMesh0::cellAddressing slight speed up for some geometries
  BUG:0003495: Divide-by-zero in SHF particle break-up model
  BUG:0003492: The formula in the OF is inconsistent with the Rosin-Rammler distribution theory formula
2020-06-11 13:30:29 +01:00
Mark Olesen
b87dd8147a ENH: add moveMesh -deltaT option
- overrides normal deltaT for testing accelerated motion.

  Can be useful to test mesh motions with constant/dynamicMeshDict
  entries (updateControl, updateInterval) where the mesh motion is
  much slower than any of the fluid physics.

  see commit 87bba9ae14
2020-06-10 15:29:07 +02:00
Mark Olesen
fec5093c04 ENH: add blockMesh -write-vtk option
- generates a vtk file in an ASCII, XML format (blockTopology.vtu).

  More information than the equivalent obj file since it includes
  connectivity, cell shapes and cell IDs (equivalent to the block
  numbers).
2020-06-04 22:15:26 +02:00
Mark Olesen
3e43edf056 ENH: unify use of dictionary method names
- previously introduced `getOrDefault` as a dictionary _get_ method,
  now complete the transition and use it everywhere instead of
  `lookupOrDefault`. This avoids mixed usage of the two methods that
  are identical in behaviour, makes for shorter names, and promotes
  the distinction between "lookup" access (ie, return a token stream,
  locate and return an entry) and "get" access (ie, the above with
  conversion to concrete types such as scalar, label etc).
2020-06-02 17:26:03 +02:00
Mark Olesen
f721b5344f ENH: report dictionary name actually used (for -dict option) 2020-06-02 14:29:36 +02:00
Mark Olesen
31b172217c ENH: support predicate checks for argList (similar to dictionary methods)
- Favour use of argList methods that are more similar to dictionary
  method names with the aim of reducing the cognitive load.

  * Silently deprecate two-parameter get() method in favour of the
    more familiar getOrDefault.
  * Silently deprecate opt() method in favour of get()

  These may be verbosely deprecated in future versions.
2020-06-02 13:51:18 +02:00
Mark Olesen
03c2373d2c ENH: align meshRefinement dictionary wrapper with dictionary code
COMP: do not rely on implicit conversion to PtrList from Istream
2020-05-26 08:56:11 +02:00
Mark Olesen
44b225604d ENH: add blockMeshDict "mergeType" keyword (#1589)
- enumerated values are (points | topology) which can be optionally
  specified in the blockMeshDict. Default is 'topology'.

  If the command-line option `blockMesh -merge-points` is specified,
  this has absolute priority over any blockMeshDict entry.

STYLE: changed blockMesh "-blockTopology" option to "-write-obj"

- this is more specific to what it does. Potentially wish to add a
  "-write-vtk" option in the future.

TUT: adjust tutorials to use preferred or necessary merge strategies:

  * channel395DFSEM - topology
  * nozzleFlow2D - points
  * pipeCyclic - points
2020-05-13 20:59:03 +02:00
Mark Olesen
595579e01d COMP: use -iquotedir for including the local '.' directory
- adds into the include-quoted search list instead the general (-Idir)
  search list.

  * makes it less subject to ordering (since it will now generally be
    searched first) and makes it less subject to how duplicate removal
    is implemented. In some compilers (#1627), the last instance of
    a duplicate directory would be used and not the first instance.

  * removes clutter in some Make/options files

COMP: add missing linkage libraries
2020-05-06 13:06:40 +02:00
Mark Olesen
b4bf26ea4f Merge remote-tracking branch 'origin/master' into develop 2020-05-06 10:13:56 +02:00
Mark Olesen
8756791b00 ENH: use topological merge as default for blockMesh (closes #1589)
- faster and fewer issues with high aspect ratio cells.

- `blockMesh -merge-geometric` for old behaviour
2020-05-04 16:19:03 +02:00
Mark Olesen
8cfb483054 STYLE: some general spelling fixes 2020-05-04 09:15:21 +02:00
Mark Olesen
8a5d108fd2 STYLE: update PrimitivePatch (#1648)
- simplified templating, which cleans up code and does not appear to
  break any normal user coding.

ENH: unique_ptr instead of homegrown demand-driven handling.
2020-04-30 15:52:42 +02:00
Mark Olesen
79048eb68f STYLE: use writeEntry(), beginBlock(), endBlock() methods
- use dictionary::get<..> instead of lookup in a few more places
2020-04-28 10:41:23 +02:00
Mark Olesen
5ab04f5745 GIT: remove prebuilt pdf file(s) 2020-04-27 09:45:17 +02:00
mattijs
c3571b7357 ENH: topoDistanceData: templated on passive data type.
Also adds pointTopoDistance, edgeTopoDistance.
2020-04-24 12:34:08 +01:00
Mark Olesen
560c053bc8 ENH: support independent specification of surface read/write format (#1600)
- adjustments to internal handling to improve run-time addition of
  other formats (eg, with additional user library)

  For example, to write a binary STL with a '.stl' extension:

    $ surfaceMeshConvert input.obj  -write-format stlb  output.stl

  Or in a sampler,
  to specify the input type without ambiguity:

  surf
  {
      type        meshedSurface;
      surface     sampling.inp;

      fileType    starcd;
      scale       0.001;
      ...
  }

STYLE: regularize naming for input/output scaling

  * -read-scale   (compat: -scaleIn)
  * -write-scale  (compat: -scaleOut)

CONFIG: change edge/surface selection name for STARCD format

- now select as "starcd" instead of "inp" to avoid naming ambiguity
  with abaqus
2020-04-03 19:11:50 +02:00
Mark Olesen
3e3193aa5e Merge remote-tracking branch 'origin/master' into develop 2020-03-16 15:27:27 +01:00
Andrew Heather
69a61bf835 BUG: objToVTK - corrected for empty lines in obj file. See #1632 2020-03-16 10:21:34 +00:00
Mark Olesen
a456e9ae92 STYLE: relocate nonCoupledBoundaryTree into meshSearcher
- use point::uniform in more places
2020-02-24 18:41:02 +01:00
Mark Olesen
4e6caf8d61 STYLE: return Switch by value, not const-reference 2020-02-21 11:44:29 +01:00
Mark Olesen
86fe2b7bc9 STYLE: remove dead code, refactor constructors in extrudePatchMesh 2020-02-21 11:13:22 +01:00
Mark Olesen
42299dca22 ENH: use IOstreamOption for writeObject() calls.
- reduces the number of parameters that are being passed around
  and allows future additions into the IOstreamOption with mininal
  effort.
2020-02-19 09:25:33 +00:00
Mark Olesen
4307e1719f STYLE: adjust names, locations for fileFormats
- renamed 'core/' -> 'base/' to avoid gitignore masking when re-adding
  files

- rename 'nas/' to 'nastran/' for more clarity

- relocated OBJstream from surfMesh to fileFormats

STYLE: remove unused parseNASCoord. Was deprecated 2017-09
2020-02-18 13:51:20 +01:00
mattijs
01c14532bd ENH: checkMesh: write cellZone, faceZone info. See #1543. 2020-02-06 12:36:26 +00:00
Kutalmis Bercin
f55da4b690 ENH: allow datToFoam writing points dict directly
- refactors the corresponding tutorial by removing redundant files and items:
    compressible/rhoCentralFoam/biconic25-55Run35
2020-01-29 12:26:36 +00:00
Mark Olesen
e252ec46dc COMP: backport of updates for gcc-92 compilation 2020-01-28 16:09:18 +01:00
Mark Olesen
ee96dba0cf STYLE: simplify Random constructors
COMP: use generated methods in a few more places
2020-01-21 12:12:44 +01:00
Mark Olesen
f0be8679f6 ENH: provide defaultName() static method for patches, zones
- consistent way of writing "patch" + Foam::name(id) etc.
2020-01-16 13:24:23 +01:00
Mark Olesen
2a98c4e665 ENH: consistency improvements for surface patch handling (fixes #483)
- remove (unused) Istream constructors, prune some unused methods,
  rationalize write() vs writeDict().
  Deprecate inconsistent construction order.

- handle empty names for ".ftr" surface patches (for plain triSurface
  format) with double-quoted strings for more reliable streaming.
  Written on a single line.

  This is _backward_ compatible, but if users have been parsing these
  files manually, they will need to adjust their code.

Previously:
```
  (
  frt-fairing:001%1
  empty

  windshield:002%2
  empty
  ...
  )
```

Updated (with example handling of empty name):
```
  (
  frt-fairing:001%1 empty

  windshield:002%2 ""
  ...
  )
```
2020-01-16 10:07:26 +01:00
Mattijs Janssens
b8c2c0acf6 ENH: shm: support for automatic faceZones 2020-01-16 12:22:02 +00:00
mattijs
0fc4b79dde ENH: checkMesh: write minPyrVol. Fixes #1543. 2020-01-06 13:59:16 +00:00
mattijs
28eb349a30 BUG: checkMesh: handling of unsorted points. Fixes #920. 2020-01-06 11:22:34 +00:00
Andrew Heather
5d7d24df94 GIT: Housekeeping 2019-12-06 17:43:08 +00:00
Mark Olesen
1310e85225 ENH: support 'get()' for retrieving argList options
- previously only had 'opt<..>()' for options, but 'get<..>()'
  provides more similarity with dictionary methods.
  The 'opt<..>()' method is retained.
2019-11-26 21:07:11 +01:00
Mark Olesen
241dee29b2 ENH: add transformPoints -time option (issue #1510) 2019-11-25 10:55:05 +01:00
Mark Olesen
98467036b3 STYLE: regularize quoting and exit on failed 'cd' 2019-11-13 13:19:16 +01:00
Mark Olesen
7c1190f0b1 ENH: rationalize some string methods.
- silently deprecate 'startsWith', 'endsWith' methods
  (added in 2016: 2b14360662), in favour of
  'starts_with', 'ends_with' methods, corresponding to C++20 and
  allowing us to cull then in a few years.

- handle single character versions of starts_with, ends_with.

- add single character version of removeEnd and silently deprecate
  removeTrailing which did the same thing.

- drop the const versions of removeRepeated, removeTrailing.
  Unused and with potential confusion.

STYLE: use shrink_to_fit(), erase()
2019-11-11 18:50:00 +01:00
Mark Olesen
ec7e3c88e4 ENH: test for WM_PROJECT_DIR being set/unset in scripts 2019-11-06 09:18:51 +01:00
Andrew Heather
fdf8d10ab4 Merge commit 'e9219558d7' into develop-v1906 2019-12-05 11:47:19 +00:00
OpenFOAM bot
e9219558d7 GIT: Header file updates 2019-10-31 14:48:44 +00:00
Mark Olesen
dcff32ea65 STYLE: use move insert in featurePointConformer 2019-09-30 09:40:59 +02:00
Mark Olesen
b6bf9129f6 DEFEATURE: pointer dereferencing for HashTable iterator
- this largely reverts 3f0f218d88 and 4ee65d12c4.

  Consistent addressing with support for wrapped pointer types (eg,
  autoPtr, std::unique_ptr) has proven to be less robust than desired.
  Thus rescind HashTable iterator '->' dereferencing (from APR-2019).
2019-09-27 19:45:54 +02:00
OpenFOAM bot
38b53e5346 STYLE: use default destructor in header definitions 2019-09-24 12:14:36 +02:00
mattijs
61dfa9b544 ENH: checkMesh: do not create wallDist unless in fvSchemes. See #71 2019-09-19 14:37:38 +01:00
mattijs
1307836caa ENH: checkMesh: write wall distance. See #71 2019-09-02 12:40:22 +01:00
Mark Olesen
dade6957c8 ENH: checkMesh report num global patches and min-max 2019-08-19 14:11:31 +02:00
mattijs
9815d37db3 BUG: corrupt extrudeToRegionMesh boundary patches in parallel (fixes #1295)
- new patches were added to the end of existing patches, which placed
  them _after_ the processor patches. This is incorrect.
2019-08-16 01:07:00 +01:00
Mark Olesen
1d79c0452c ENH: additional contiguous traits (#1378)
- change contiguous from a series of global functions to separate
  templated traits classes:

    - is_contiguous
    - is_contiguous_label
    - is_contiguous_scalar

  The static constexpr 'value' and a constexpr conversion operator
  allow use in template expressions.  The change also makes it much
  easier to define general traits and to inherit from them.

  The is_contiguous_label and is_contiguous_scalar are special traits
  for handling data of homogeneous components of the respective types.
2019-07-29 11:36:30 +02:00
Mark Olesen
5382c2f590 STYLE: fix namespace documentation for CGAL-related content 2019-07-30 18:15:48 +02:00
Mark Olesen
f94be1bebb ENH: use FatalIOErrorInLookup instead of FatalErrorInLookup 2019-07-16 10:26:51 +02:00
Mark Olesen
fb09f56aba ENH: use FatalErrorInLookup macros (#1362) 2019-07-12 18:00:00 +02:00
Mark Olesen
1d86fc4f6b ENH: add single-parameter sortedOrder() function 2019-07-17 11:08:40 +02:00
Andrew Heather
96e7dd8da6 Merge branch 'develop' 2019-06-27 13:27:57 +01:00
mattijs
64ed81b78f BUG: gmsh: skip empty lines. See #1155.
Fix provided by Gavin Ridley.
2019-04-11 11:07:28 +01:00
Mark Olesen
b5d775a691 STYLE: avoid deprecated lookup methods 2019-05-22 15:06:12 +01:00
Mark Olesen
6c8f6a2f50 ENH: support all 12 Euler rotation orders (#1292)
- adjust naming of quaternion 'rotationSequence' to be 'eulerOrder'
  to reflect its purpose.

- provide rotation matrices directly for these rotation orders in
  coordinateRotations::euler for case in which the rotation tensor
  is required but not a quaternion.
2019-05-10 11:20:21 +02:00
Mark Olesen
897528da1a ENH: streamline handling of static/dynamic libs in detection scripts 2019-04-29 10:04:44 +02:00
Mark Olesen
beefee48d4 COMP: adjust compilation order with updated interdependencies
- Eg, with surface writers now in surfMesh, there are fewer libraries
  depending on conversion and sampling.

COMP: regularize linkage ordering and avoid some implicit linkage (#1238)
2019-04-28 14:44:33 +02:00
Mark Olesen
e1609d16d1 STYLE: use degToRad() instead of pi/180 2019-04-26 11:48:27 +02:00
mattijs
bc53e50c90 CONTRIBUTION: gmshToFoam: support version 4 mesh format. Fixes #1155.
Patch contributed by Gavin Ridley.
2019-04-25 16:33:17 +01:00
mattijs
7cc9961ff2 BUG: gmsh: skip empty lines. See #1155.
Fix provided by Gavin Ridley.
2019-04-11 11:07:28 +01:00
Mark Olesen
39c91d8440 ENH: support HashTable iterator pointer dereference 2019-04-06 16:00:21 +02:00
mattijs
a01b05b8c4 ENH: renumberMesh: renumber refinement data. Fixes #1241. 2019-04-01 09:48:23 +01:00
mattijs
83e321d3e4 ENH: snappyHexMesh: allow cross-patch merging of patch faces. Fixes #1255. 2019-03-27 15:04:48 +00:00
mattijs
f513f8bec6 ENH: extrudeMesh: -dict. See #1253 2019-03-27 10:39:35 +00:00
mattijs
7d077626d3 ENH: moveDynamicMesh: add -overwrite option. Fixes #1233. 2019-03-13 15:43:38 +00:00
Mark Olesen
773ec00d4b ENH: improved consistency of surface writers (#1232)
- remove writeGeometry() in favour of write() and make it pure virtual
  so that all writers must explicitly deal with it.

- establish proxy extension at construction time and treated as an
  invariant thereafter. This avoids potentially surprising changes in
  behaviour when writing.
2019-03-11 15:09:03 +01:00
Mark Olesen
c9549ba6a4 GIT: added PDRblockMesh to Allwmake 2019-02-25 07:46:21 +01:00
Mark Olesen
84270ed667 ENH: new PDRblockMesh mesh generation utility (issue #1216)
- While a rectilinear mesh can be created with blockMesh, not every mesh
  created with blockMesh will satisfy the requirements for being a
  rectilinear mesh.

  This alternative to blockMesh uses a single block that is aligned
  with the xy-z directions and specifications of the control points,
  mesh divisions and expansion ratios. For example,

    x
    {
        points  ( -13.28 -0.10 6.0 19.19 );
        nCells  (  10  12 10 );
        ratios  ( 0.2   1  5 );
    }

    y { ... }
    z { ... }

  With only one block, the boundary patch definition is simple and the
  canonical face number is used directly. For example,

    inlet
    {
        type    patch;
        faces   ( 0 );
    }
    outlet
    {
        type    patch;
        faces   ( 1 );
    }

    sides
    {
        type    patch;
        faces   ( 2 3 );
    }

    ...

- After a mesh is defined, it is trivial to retrieve mesh-related
  information such as cell-volume, cell-centres for any i-j-k location
  without an actual polyMesh.

STYLE: remove -noFunctionObjects from blockMesh

- no time loop, so function objects cannot be triggered anyhow.
2019-02-23 15:45:32 +01:00
Mark Olesen
181c974b11 ENH: improved sample surfaces and surface writers (#1206)
- The writers have changed from being a generic state-less set of
  routines to more properly conforming to the normal notion of a writer.
  These changes allow us to combine output fields (eg, in a single
  VTK/vtp file for each timestep).

  Parallel data reduction and any associated bookkeeping is now part
  of the surface writers.
  This improves their re-usability and avoids unnecessary
  and premature data reduction at the sampling stage.

  It is now possible to have different output formats on a per-surface
  basis.

- A new feature of the surface sampling is the ability to "store" the
  sampled surfaces and fields onto a registry for reuse by other
  function objects.

  Additionally, the "store" can be triggered at the execution phase
  as well
2019-02-07 18:11:34 +01:00
Mark Olesen
170041aaf5 ENH: for-range, forAllIters() ... in applications/
- reduced clutter when iterating over containers
2019-01-07 09:20:51 +01:00
Mark Olesen
60234ab007 STYLE: reduced nesting on return branching 2019-02-13 08:06:36 +01:00
OpenFOAM bot
154029ddd0 BOT: Cleaned up header files 2019-02-06 12:28:23 +00:00
mattijs
14e6b198cc ENH: checkMesh: write correct faceWeights. Fixes #1099. 2019-01-31 15:28:01 +00:00
Andrew Heather
da29c4f0d0 Merge branch 'feature-snappyHexMesh-check' into 'develop'
Feature snappy hex mesh check

See merge request Development/OpenFOAM-plus!229
2019-01-28 08:57:46 +00:00
Mark Olesen
3b91160027 STYLE: centralize example dictionaries under etc/ (issue #1074)
- as well as being more convenient to find, this is necessary when the
  OpenFOAM installation is without sources or tutorials
2019-01-26 17:46:08 +01:00
Mark Olesen
1c85c64984 STYLE: clarify input requirements for extrusion models (#1181)
- changed the sectorCoeffs keyword to 'point' from 'axisPt'
  for more similarity with other dictionaries.
  Continue to accept 'axisPt' for compatibility.
2019-01-24 09:40:12 +01:00
Mark Olesen
8b3a00efcc STYLE: fixup very old-style case headers 2019-01-24 08:44:41 +01:00
Mark Olesen
567ae55e8e STYLE: improve input check on gmshToFoam 2019-01-23 22:45:00 +01:00
mattijs
47d29b1cdd ENH: snappyHexMesh: user size limit. See #972. 2019-01-23 12:25:54 +00:00
Mark Olesen
a5cc0ffcad STYLE: use const reference for caught exceptions 2019-01-23 09:03:06 +01:00
Mark Olesen
53efb24a8d STYLE: use ListOps::uniqueEqOp instead of local definition 2019-01-18 15:34:28 +01:00
mattijs
6ccdc77468 BUG: trackingInverseDistance: fix trackingInverseDistance. Fixes #736. 2019-01-17 18:21:38 +00:00
Mark Olesen
f498d09dbf ENH: add simplified gather methods for globalIndex with default communicator
- when combining lists in processor order this simplifies code and
  reduces memory overhead.

  Write this:
    ----
    labelList collected;

    const globalIndex sizing(input.size());
    sizing.gather(input, collected);
    ----

  OR

    ----
    labelList collected;
    globalIndex::gatherOp(input, collected);
    ----

  Instead of this:

    ----
    labelList collected;

    List<labelList> scratch(Pstream::nProcs());
    scratch[Pstream::myProcNo()] = input;
    Pstream::gatherList(scratch);

    if (Pstream::master())
    {
        collected = ListListOps::combine<labelList>
        (
            scratch,
            accessOp<labelList>()
        );
    }
    scratch.clear();
    ----
2019-01-16 21:33:06 +01:00
Mark Olesen
2067014079 ENH: minor consistency improvements for bounding box
- a valid() method (same as !empty() call) for consistency with other
  containers and data types

- a centre() method (same as midpoint() method) for consistency with
  other OpenFOAM geometric entities
2019-01-09 09:32:23 +01:00
Mark Olesen
14a404170b ENH: for-range, forAllIters() ... in applications/utilities
- reduced clutter when iterating over containers
2019-01-07 09:20:51 +01:00
Mark Olesen
74d9dc3f50 BUG: polyMesh constructor AUTO_WRITE flag, ignored readOpt (#1147)
- fixed some more places with an explicit AUTO_WRITE.

BUG: revert handling of the readOption. It should not be NO_READ.

  In cases where the user a IOobject without specifying read/write, it
  defaults to NO_READ anyhow. However, the move constructor can also
  be called with empty lists and a read option. This has the same
  signature, but obviously will not work with NO_READ.
2019-01-07 22:23:19 +01:00
Mark Olesen
e2bc0b55b9 COMP: use std::move() explicitly to avoid copying 2019-01-02 15:56:54 +01:00
mattijs
10da897275 ENH: snappyHexMesh: limit printing in dry-run. See #972. 2018-12-24 08:55:42 +00:00
Andrew Heather
9231534efa STYLE: Updating version to v1812 2018-12-19 18:07:52 +00:00
Mark Olesen
7ee1ec92ec STYLE: add usage information for subsetMesh argument 2018-12-19 15:15:28 +01:00
Mark Olesen
919fa3a541 STYLE: ensure help for -dict matches its intended usage 2018-12-17 10:39:59 +01:00
Mark Olesen
54ac451bf5 ENH: add -dict option for mirrorMesh 2018-12-17 09:51:29 +01:00
Mark Olesen
1d85fecf4d ENH: use Zero when zero-initializing types
- makes the intent clearer and avoids the need for additional
  constructor casting. Eg,

      labelList(10, Zero)    vs.  labelList(10, 0)
      scalarField(10, Zero)  vs.  scalarField(10, scalar(0))
      vectorField(10, Zero)  vs.  vectorField(10, vector::zero)
2018-12-11 23:50:15 +01:00
Mark Olesen
5d9e278e92 ENH: consolidate handling of mandatory/optional command arguments
- for some special cases we wish to mark command-line arguments as
  being optional, in order to do our own treatment. For example,
  when an arbitrary number of arguments should be allowed.

  Now tag this situation with argList::noMandatoryArgs().
  The argList::argsMandatory() query can then be used in any further
  logic, including the standard default argument checking.

- with the new default check, can consolidate the special-purpose

      "setRootCaseNonMandatoryArgs.H"

  into the regular

      "setRootCase.H"

- revert to a simple "setRootCase.H" and move all the listing related
  bits to a "setRootCaseLists.H" file. This leaves the information
  available for solvers, or whoever else wishes, without being
  introduced everywhere.

- add include guards and scoping to the listing files and rename to
  something less generic.

     listOptions.H -> setRootCaseListOptions.H
     listOutput.H  -> setRootCaseListOutput.H
2018-12-13 01:45:09 +01:00
Mark Olesen
29a5793b5b STYLE: argList::opt method instead of the longer argList::lookupOrDefault
- also replaced a few instances of readIfPresent with opt<> for
  constant values.
2018-12-12 12:10:39 +01:00
Mark Olesen
f38190213c ENH: support usage descriptions for command arguments 2018-12-12 11:58:56 +01:00
Mark Olesen
68ec561df8 STYLE: add usage notes to more utilities and solvers 2018-12-11 15:25:27 +01:00
Mark Olesen
fc2f2e74d2 BUG: checkMesh, moveDynamicMesh checks not in postProcessing/ (fixes #1104)
- now placed under postProcessing/checkMesh and postProcessing/checkAMI,
  respectively.

  Output files are now also tagged with the id of the patch, in case
  there are multiple AMI patches in use.
2018-12-05 22:03:28 +01:00
Mark Olesen
dd0487ac2a STYLE: typo in comments 2018-11-28 12:35:34 +01:00
Mark Olesen
29e1d9e982 Merge remote-tracking branch 'origin/develop' into develop 2018-11-27 16:59:08 +01:00
Mark Olesen
46e2e71f28 STYLE: update dictionary documentation for topoSources (#1060) 2018-11-27 08:32:27 +01:00
mattijs
0e5325bff9 ENH: snappyHexMesh: add -dry-run argument. See #972. 2018-11-26 12:23:01 +00:00
Mark Olesen
a139543e9c ENH: add boundaryToCell, patchToCell topoSetCellSources (#1060)
- can be used, for example, to visualize all wall cells - for quality
  or other purposes - without requiring an intermediate faceSet for
  the selection. Request arising from pending merge !213.
2018-11-24 13:52:43 +01:00
Mark Olesen
0d29257a6d STYLE: use vtk::surfaceWriter instead of sampleSurface version 2018-10-16 14:49:56 +02:00
Mark Olesen
0d2dbaf61b ENH: parallel and xml output for vtk topoSet writers (issue #926)
- introduce lower-level vtk::indirectPatchWriter class
2018-09-17 15:41:58 +02:00
Mark Olesen
577babc72b ENH: reject bad time values for blockMesh -time (closes #1093) 2018-11-22 15:51:05 +01:00
Mark Olesen
1883a872a1 STYLE: adds comments in empty Make/options files
- easier when making modifications

STYLE: spelling in topoSetSource comments
2018-11-13 15:21:13 +01:00
Mark Olesen
2ac5df6f93 BUG: inconsistent field ordering in PDRMesh (fixes #1069) 2018-11-12 12:59:03 +01:00