Commit Graph

7709 Commits

Author SHA1 Message Date
mattijs
9ed0bb1e4f ENH: redistributePar: update for distribute mode
- uses read&write handlers
- fixes initialisation of partial handlers
- 'uniform' copied to wrong place
- -overwrite not deleting old processors dirs
2023-11-21 11:14:28 +00:00
mattijs
259e8c22a5 ENH: improve check for decomposedBlock and simpler startup 2023-11-21 11:14:28 +00:00
mattijs
c880efb4a6 ENH: improve fileHandler support for redistributePar
- use file handlers to manage where meshes/fields are to be read and
  written.
2023-11-21 11:14:28 +00:00
mattijs
bcd873ccfe ENH: Update redistribute clouds with readOnProc/writeOnProc
- when reading, detect all clouds on all processors and uses this when
  reading fields. Similarly, when writing it uses writeOnProc to skip
  clouds that are empty on any particular processor.

Co-authored-by: Mark Olesen <>
2023-11-21 11:14:28 +00:00
Andrew Heather
eea72282ab ENH: CHT solvers - avoid fvSolution persisting on time db 2023-11-20 14:32:11 +00:00
Mark Olesen
3fd1b74b26 ENH: globalIndex contains(), findProcAbove(), findProcBelow() methods
- these help when building upper or lower connected topologies.
  The new findProc() method is a non-failing whichProcID alternative
2023-11-20 09:36:23 +01:00
Mark Olesen
cfb752647a ENH: globalIndex and CompactListList improvements
- provide a globalIndex::calcOffsets() taking an indirect list, which
  enables convenient offsets calculation from a variety of inputs.

- new CompactListList unpack variant: copy_unpack()
  The copy_unpack() works somewhat like std::copy() in that it writes
  the generated sublists to iterator positions, which makes this
  type of code possible:

      CompactListList<label> compact = ...;
      DynamicList<face> extracted;

      compact.copy_unpack<face>
      (
          std::back_inserter(extracted),
          labelRange(4, 10)
      );

  -and-

      const label nOldFaces = allFaces.size();
      allFaces.resize(allFaces + nNewFaces);

      auto iter = allFaces.begin(nOldFaces);

      iter = compact.copy_unpack<face>(iter, /* selection 1 */);
      ...
      iter = compact.copy_unpack<face>(iter, /* selection 2 */);

ENH: globalIndex resize()

- can be used to shrink or grow the offsets table.
  Any extension of the offsets table corresponds to 'slots'
  with 0 local size.
2023-11-20 09:35:59 +01:00
Mark Olesen
d6d28ccfa2 ENH: make sliceRange modifiable - similar to labelRange 2023-11-18 17:25:22 +01:00
Mark Olesen
a0b9732321 ENH: add support for CHAR_DATA token
- allows construction of string tokens holding character content.
  For example, data that has been serialized and buffered and that
  now needs to be written or sent to another process.
2023-11-18 15:24:15 +01:00
Mark Olesen
b1f9fe9d79 STYLE: adjust ITstream naming for empty_stream() 2023-11-18 15:24:15 +01:00
Mark Olesen
636a654f4a ENH: add standard _byte access for exprValue
- allows UPstream::broadcast and direct read/write

- add operator== for exprValue
2023-11-18 15:24:01 +01:00
Mark Olesen
a81d757721 COMP: add missing include for SortList
- extend test to include partition + sort
2023-11-14 22:54:44 +01:00
Mark Olesen
3524a6f4df FIX: getLine() line counting (adjustment to 459aaad0f9)
ENH: return ITstream::emptyStream() in a 'bad' state

- to indicate that it is invalid for reading
2023-11-14 22:54:44 +01:00
Mark Olesen
269be2f4ea ENH: provide Time::NewGlobalTime factory methods (#3007)
- avoids clutter of argList::envGlobalPath() ...

ENH: allow temporary overwriting of output writeFormat

- allows switching for particular output routines

COMP: explicitly use TimePaths methods with Time

- this simplifies any overloading done at a later stage
2023-11-07 10:33:47 +01:00
Mark Olesen
07dcdefa02 ENH: support creation of boundaries/zones from list of entries
- this makes it easier to split creation into a two-stage process
  as required

- extend handling for polyBoundaryMeshEntries, faBoundaryMeshEntries
  with more functionality. Ensure that these are never registered.

ENH: addition writeEntry methods for polyBoundaryMesh

- simplifies streaming and collating into other files

ENH: polyMesh rereading - update owner/neighbour header information

- this avoids accidentally reading the "cells" file if the mesh has
  been created with NO_READ and then updated

STYLE: less vertical space when outputting empty PtrList
2023-11-07 10:33:47 +01:00
Mark Olesen
98246a438e ENH: simplify calling of decomposition, support CompactListList
- combined most of the unweighted and weighted decomposition routines
  such that an empty weight field is treated as uniform weighting.
  This allows default parameters and cuts down on the number of
  decompose methods.

- for topology-driven decomposition, it is now possible to pass in the
  owner/neighbour connectivity as a CompactListList directly instead
  of first creating a labelListList (which was internally repacked into
  a CompactListList in many cases).
  However, multiLevelDecomp still uses unpacking (to avoid a larger
  reworking of code).

- support direct creation of some methods (eg, random, scotch etc)
  without a dictionary

- fix incorrect neighbour face weighting (fixes #3019)

ENH: relocate calcCellCells from decompositionMethod to globalMeshData

- makes it more universally available
2023-11-07 10:33:47 +01:00
Mark Olesen
507805c330 ENH: partly align globalIndex and CompactListList methods
- CompactListList::size() corresponds to the number of sub-lists
  whereas globalIndex::size() corresponds to the totalSize().
  This difference can lead to potential coding errors when switching
  between pure addressing (eg globalIndex) and addressing with content
  (eg, CompactListList).

  Within the source tree, there are no longer any occurances of
  globalIndex::size() but it is nonetheless unsafe to change its
  meaning now. Instead provide a commonly named length() method that
  corresponds to the natural length: ie, the number of offsets minus 1
  (with guards).

- add CompactListList::writeMatrix for writing the compact contents
  in an unpacked form (eg, for debugging) without actually needing to
  unpack into storage.

- provide globalIndex::whichProcID() two-parameter version
  with myProcNo as the first argument.
  Symmetric with isLocal etc, useful when using a communicator
  that is not worldComm.
2023-11-07 10:33:47 +01:00
Mark Olesen
08a9b03891 ENH: polyBoundaryMesh additional faces() and faceOwner() slice methods
- return a subList view of the mesh faces, owners
2023-11-07 10:33:47 +01:00
Mark Olesen
546b204793 COMP: split endian.H into foamEndianFwd.H and foamEndian.H
- usually only need big/little defines (which are now in the Fwd)
  and rarely need byte-swapping.

  Provide endian.H compatibility include, but foamEndianFwd.H or
  foamEndian.H to avoid potential name clashes.
2023-11-07 10:33:47 +01:00
Mark Olesen
98ccb7df6b ENH: extend VectorSpace traits to include pTraits_cmptType
- The pTraits_cmptType returns the data type of 'cmptType' (for
  arithmetic and VectorSpace types) or is simply a pass-through.

  This can be combined with the pTraits_nComponents for casting.
  For example,

  function
  (
      reinterpret_cast<pTraits_cmptType<Type>::type*>(buf.data()),
      (buf.size()/pTraits_nComponents<Type>::value)
  );

ENH: extend Foam::identityOp so support array indexing (pass-through)
2023-11-07 10:33:47 +01:00
DaveD
ad2389a37d BUG: foamMeshToFluent: improve compatibility with tmerge (fixes #2820) 2023-11-03 16:26:57 +00:00
Mark Olesen
dc7d0ffeaa ENH: add face/triFace find(edge) method (#3004)
- returns the edge index within the face, -1 if not found
2023-10-27 13:48:18 +02:00
Mark Olesen
b34793c392 ENH: additional globalIndex methods and helpers
- single() method : simply tests if the globalIndex has nProcs == 1,
  which is typically from a gatherNone invocation.
  For example,

     globalIndex gi;
     if (...) gi.reset(localSize);
     else     gi.reset(globalIndex::gatherNone{}, localSize);

     // later...
     const label begin = (gi.single() ? 0 : gi.localStart());
     const label count = (gi.single() ? gi.totalSize() : gi.localSize());

- add front() and back() methods to return the begin/end ranges,
  and begin_value(), end_value() - as per labelRange.

- make more methods noexcept

- calcOffset(), calcRange() helper functions to determine
  the processor-local of a numbering range without the overhead of
  creating a list of offsets.

  For example,

     label myOffset = globalIndex::calcOffset(mesh.nCells());
     labelRange mySlice = globalIndex::calcRange(mesh.nCells());

- add globalIndex localEnd() as per CompactListList method

STYLE: align looping constructs in CompactListList with List

- make more methods noexcept
2023-10-26 14:03:39 +02:00
Mark Olesen
d9f0587416 ENH: promote ListOps::identity to Foam::identity
- becoming more frequently used and there is no ambiguity in calling
  parameters either - identity(label) vs identity(labelUList&).

  Provide both int32 and int64 versions.
2023-10-26 11:24:57 +02:00
Mark Olesen
1faa143a7c ENH: expose fieldNames() selection for sampledSets/sampledSurfaces
- consistent with probes. Allows reporting/querying
2023-10-26 09:19:18 +02:00
Mark Olesen
0343ab00f3 DOC: add application/test/README.md
- extraction of Description from the respective tests.
  Relatively incomplete

  Uses the `application/tests/get-descriptions` extractor
2023-10-24 10:57:49 +02:00
Mark Olesen
870c6a6924 TEST: add standalone test application: Test-surface-sampling 2023-10-24 10:57:22 +02:00
Mark Olesen
1476de89ee ENH: add unary functor for Foam::zero
- acts somewhat like an identity op that 'swallows' its parameter
  and maps back to zero.
2023-10-23 15:28:34 +02:00
Mark Olesen
e4745d09ec STYLE: remove virtual from override-qualified methods (surfaceFeatureExtract) 2023-10-23 09:44:54 +02:00
Mark Olesen
fb26fcedfc STYLE: use getOrDefault instead of lookupOrDefault
- now mark methods with strict deprecation, to make it easier to find
  their use but without adding extra compilation noise for others

ENH: minor update for Enum methods and iterator

- add warnOnly (failsafe) option for readEntry and getOrDefault

- add good() method to Enum iterator (simliar to HashTable)

- replace unused/fragile Enum find() methods with iterator return
  that can be used more generally
2023-10-16 14:19:19 +02:00
Mark Olesen
3562565995 ENH: minor updates for globalIndex
- explicit use of UPstream::worldComm in globalIndex methods
  for more clarity

- adjust method declaration ordering:
  de-emphasize the processor-local convenience methods

- consistent use of leading tag dispatch,
  remove unused enum-based dispatch tag

- add begin()/cbegin() with offset (as per List containers)

BUG: missing use of communicator in globalIndex gatherNonLocal

- does not affect any existing code (which all use worldComm anyhow)
2023-10-13 14:44:18 +02:00
Mark Olesen
0fb2c8eb1c STYLE: update applications/tests to use SpanStream/CharStream 2023-10-11 18:11:37 +00:00
Mark Olesen
3693d61e6c ENH: refine SpanStream and CharStream methods
- support std::string_view (c++17) or span view (older c++) of stream
  buffer contents. This simplifies formatting + reparsing.

  Example,

      OCharStream os;
      os << ...;

      ISpanStream is(os.view());
      is >> ...;

- additional release() method for ICharStream, OCharStream
  that returns the contents as a DynamicList<char> and resets the stream.

- provide a str() method for API compatibility with older
  std::ostringstream etc.
2023-10-11 18:11:37 +00:00
Mark Olesen
b76595df42 ENH: improve stream output of std::string etc.
- change write(const string&) to write(const std::string&).
  This allows output of std::string without an intermediate copy.

- additional writeQuoted method to handle range of char data:

     writeQuoted(const char* str, std::streamsize len, bool)

  This helps with supporting string_view and span<char>

- add operator<< for stdFoam::span<char> and std::string_view (c++17)

- avoid duplicate code in OBJstream

STYLE: add override keyword for IO stream methods
2023-10-11 18:11:37 +00:00
Mark Olesen
d9727fad1c ENH: use updated HashTable methods 2023-10-11 18:11:37 +00:00
Mark Olesen
96c9bf8615 ENH: add List::resize_unsafe(label)
- changes the addressed list size without affecting list allocation.
  Can be useful for the following type of coding pattern:

  - pre-allocate a List with some max content length
  - populate with some content (likely not the entire pre-allocated size)
  - truncate the list to the length of valid content
  - process the List
  - discard the List

  Since the List is being discarded, using resize_unsafe() instead of
  resize() avoids an additional allocation with the new size and
  copying/moving of the elements.

  This programming pattern can also be used when the List is being
  returned from a subroutine, and carrying about a bit of unused memory
  is less important than avoiding reallocation + copy/move.

  If used improperly, it can obviously result in addressing into
  unmanaged memory regions (ie, 'unsafe').
2023-10-11 18:11:37 +00:00
Mark Olesen
ce1260cf70 ENH: improve DynamicList shrink and swapping
- shrink_to_fit()
  corresponds to std::vector naming.
  For DynamicList it is a *binding* request.

- shrink_unsafe()
  simply adjusts the capacity() to match the
  current size() without forcing a re-allocation.

  Useful when collapsing to a non-dynamic list to avoid reallocation
  and copying contents. The memory cleanup will still occur properly
  at a later stage.

- DynamicList::swap(List&)
  simple recovery of content into a non-dynamic List that also
  ensures that the capacity is correctly updated.

STYLE: promote List::capacity() to public visibility (like std::vector)

STYLE: remove unused expandStorage() method

- simply a wrapper for resize(capacity())
2023-10-11 18:11:37 +00:00
Mark Olesen
1d43e45fdd ENH: add test application for fileHander writing
COMP: update applications/test
2023-10-11 18:11:37 +00:00
Mark Olesen
1af40e7dfe STYLE: remove unused (transitional) methods from CircularBuffer
- old methods (and class) were not widely used
2023-10-11 18:11:37 +00:00
Mark Olesen
524c953af3 STYLE: use List clear() instead of setSize(0), resize(0)
- adds some consistency
2023-10-11 18:11:37 +00:00
mattijs
9ac0f03963 ENH: pisoFoam: allow runTimeModifiable. Fixes #2997. 2023-10-11 15:54:30 +01:00
Mark Olesen
0250a1b0bb ENH: support List sub-slice searching, use std::find()
- support UList shallowCopy with pointer/size
  (eg, for slicing into or from span)

ENH: add SubList::reset() functionality

- allows modification of a SubList after construction.
  Previously a SubList had an immutable location after construction
  and there was no way to shift or change its location.

BUG: missed special handling for DynamicList<char>::readList (fixes #2974)

- equivalent to List<char>::readList, in which the stream is
  temporarily toggled from ASCII to BINARY when reading in a List of
  char data.
  This specialization was missed when DynamicList<T>::readList() was
  fully implemented.
2023-09-05 10:15:17 +02:00
Mark Olesen
aa1b6d9cbd ENH: add ListPolicy uniformity enumeration and algorithm
- defines values for EMPTY, UNIFORM, NONUNIFORM and MIXED
  that allow bitwise OR reduction and provide an algorithm
  for calculating uniformity

ENH: consolidate more efficient uniformity checks in PackedList

ENH: improve linebreak handling when outputting small matrices
2023-09-04 14:40:33 +02:00
Mark Olesen
459aaad0f9 ENH: improve robustness of raw reading, file size checks
- use ignore instead of seekg/tellg to swallow input (robuster)

- check for bad gcount() values

- wrap Foam::fileSize() compressed/uncompressed handling into IFstream.

- improve handling of compressed files in masterUncollatedFileOperation.
  Previously read into a string via stream iterators.
  Now read chunk-wise into a List of char for fewer reallocations.
2023-09-01 14:44:49 +00:00
Mark Olesen
a341d09afc ENH: update and enhancement of memory-streams
- soft renames (ie, old names still available via typedefs) for more
  reasonable names and more coverage with std stream variants.

  The old names could be a bit cryptic.
  For example, uiliststream (== an unallocated/external list storage),
  which is written as std::ispanstream for C++23.

  Could similarly argue that IListStream is better named as
  ICharStream, since it is an input stream of characters and the
  internal storage mechanism (List or something else) is mostly
  irrelevant.

  Extending the coverage to include all std stream variants, and
  simply rewrap them for OpenFOAM IOstream types. This simplifies the
  inheritance patterns and allows reuse of icharstream/ocharstream as
  a drop-in replace for istringstream/ostringstream in other wrappers.

  Classes:
    * icharstream / ICharStream   [old: none / IListStream]
    * ocharstream / OCharStream   [old: none / OListStream]
    * ispanstream / ISpanStream   [old: uiliststream / UIListStream]
    * ospanstream / OSpanStream   [old: none / UOListStream]

  Possible new uses : read file contents into a buffer, broadcast
  buffer contents to other ranks and then transfer into an icharstream
  to be read from. This avoid the multiple intermediate copies that
  would be associated when using an istringstream.

- Use size doubling instead of block-wise incremental for ocharstream
  (OCharStream). This corresponds to the sizing behaviour as per
  std::stringstream (according to gcc-11 includes)

STYLE: drop Foam_IOstream_extras constructors for memory streams

- transitional/legacy constructors but not used in any code
2023-09-01 14:44:49 +00:00
Mark Olesen
750d9084d4 ENH: improve addressing into labelRanges (#2933)
- totalSize() returns retrieve the linear (total) size
  (naming as per globalIndex)
- operator[] retrieves the referenced value (linear indexing)
- labels() returns a flattened labelList (as per labelRange itself)
2023-08-30 13:39:16 +00:00
Mark Olesen
9d291ab4cc ENH: add Pstream::broadcastList()
- broadcasts list contiguous content as a two-step process:
    1. broadcast the size, and resize for receiver list
    2. broadcast contiguous contents (if non-empty)

  This avoids serialization/de-serialization memory overhead but at
  the expense of an additional broadcast call.
  The trade-off of the extra broadcast of the size will be less
  important than avoiding a memory peak for large contiguous mesh data.

REVERT: unstable MPI_Mprobe/MPI_Mrecv on intelmpi + PMI-2 (#2796)

- partial revert of commit c6f528588b, for NBX implementation.
  Not yet flagged as causing errors here, but eliminated for
  consistency.
2023-08-29 11:24:16 +02:00
Mark Olesen
0e11f47f74 STYLE: prefer emplace_back() to append() + last() 2023-08-29 11:24:16 +02:00
Mark Olesen
698e05eeb3 STYLE: prefer push_uniq() to appendUniq
- more consistency with push_back etc.
2023-08-29 11:24:16 +02:00
Mark Olesen
2395e493d1 ENH: simplify add/remove patch/zone groups
STYLE: reuse polyBoundaryMesh patchSizes(), patchStarts()
2023-08-29 11:24:16 +02:00
Mark Olesen
886ba89ddb ENH: change internal dictionary separator to '/' (#1073)
- simplifies internal handling (like a fileName) and allows the
  dictionary name to be used with unambiguous addressing.
  The previous dot (.) separator is ambiguous (ie, as dictionary
  separator or as part of a keyword).

ENH: foamDictionary report -add/-set to stderr
2023-08-21 08:40:39 +02:00
Mark Olesen
778796853d CONFIG: enable use of stricter deprecation warnings
- selected with '+strict' in WM_COMPILE_CONTROL or 'wmake -strict', it
  enables the FOAM_DEPRECATED_STRICT() macro, which can be used to
  mark methods that are implicitly deprecated, but are not yet marked
  as full deprecated (eg, API modification is too recent, generates
  too many warnings).  Can be considered a developer option.
2023-08-21 08:39:36 +02:00
Mark Olesen
97668eab26 STYLE: update noexcept and default construct for signals
- eliminate ClassName in favour of simple debug

- include Apple-specific FPE handling after local definition
  to allow for more redefinitions

COMP: remove stray <csignal> includes
2023-08-18 15:42:18 +02:00
Mark Olesen
b620152191 ENH: add UPstream::msgType() setter method and UPstream::incrMsgType()
- like UPstream::parRun() etc, returns old value
2023-08-18 15:08:42 +02:00
Mark Olesen
03ca52b036 ENH: PtrList, PtrDynList, HashPtrTable try_emplace() method
- naming like std::map::try_emplace(), it behaves like emplace_set()
  if there is no element at the given location otherwise a no-op

ENH: reuse existing HashPtrTable 'slot' when setting pointers

- avoids extra HashTable operations
2023-08-18 13:55:32 +02:00
Mark Olesen
268de43afc ENH: provision for delayed reading of compound tokens (#2953)
- the construction of compound tokens is now split into two stages:
    - default construct
    - read contents
  This permits a larger variety of handling.

- the new token::readCompoundToken(..) method allows for simpler
  more failsafe invocations.

- forward resize(), read() methods for compound tokens to support
  separate read and population.
  Top-level refCompoundToken() method for modify access.

ENH: split off a private readCompoundToken() method within ISstream

- this allows overloading and alternative tokenisation handling for
  derived classes
2023-08-16 16:22:17 +02:00
Mark Olesen
43f8b477b7 ENH: additional ITstream access/manipulate methods
- simplifies iteration of ITstream using nRemainingTokens() and skip()
  methods or directly as a list of tokens.

  The currentToken() method returns const or non-const access to
  the token at the current tokenIndex.

  The peekToken(label) method provides failsafe read access to tokens
  at given locations.

ENH: add primitiveEntry construct with moving a single token
2023-08-16 16:22:17 +02:00
Mark Olesen
2422e6f061 ENH: use std algorithms for copy/move/compare within List containers
ENH: add List resize_fill variant. Fuses resize_nocopy + uniform fill

COMP: avoid cast ambiguity when assigning Foam::zero to UList<char>
2023-08-16 12:28:12 +02:00
Mark Olesen
eeb9d144e3 STYLE: qualify Swap with Foam:: prefix (visibility)
- drop unnecessary Foam::Swap specializations when MoveConstructible
  and MoveAssignable already apply. The explicit redirect to swap
  member functions was needed before proper move semantics where
  added.

  Removed specializations: autoPtr, refPtr, tmp, UList.
  Retained specialization: DynamicList, FixedList.

     Special handling for DynamicList is only to accommodate dissimilar
     sizing template parameters (which probably doesn't occur in
     practice).
     Special handling for FixedList to apply element-wise swapping.

- use std::swap for primitives. No need to mask with Foam::Swap wrapper
2023-08-16 12:28:09 +02:00
Mark Olesen
fabd3f4e0c ENH: eliminate reliance on SLList during reading
- fully implement DynamicList::readList() instead of simply
  redirecting to List::readList(). This also benefits DynamicField.
  Leverage DynamicList reading to simplify and improve CircularBuffer
  reading.

- bracket lists are now read chunk-wise instead of using a
  singly-linked list. For integral and vector-space types
  (eg, scalar, vector, etc) this avoids intermediate allocations
  for each element.

ENH: add CircularBuffer emplace_front/emplace_back

STYLE: isolate to-be-deprecated construct/assign forms

- still have construct/assign FixedList from a C-array.
  This is not really needed, can use std::initializer_list

- still have construct/assign List from SLList.
  Prefer to avoid these in the future.

DEFEATURE: remove construct/assign FixedList from SLList

- never used

DEFEATURE: remove move construct/assign List from SLList

- now unused. Retain copy construct/assign from SLList for transition
  purposes.
2023-08-16 12:27:04 +02:00
Mark Olesen
97a42df7ba ENH: add VectorSpace trait tests and evaluations
- is_vectorspace :
  test existence and non-zero value of the Type 'rank' static variable

- pTraits_rank :
  value of 'rank' static variable (if it exists), 0 otherwise

- pTraits_nComponents :
  value of 'nComponents' static variable (if it exists), 1 otherwise

- pTraits_has_zero :
  test for pTraits<T>::zero member, which probably means that it also
  has one, min, max members as well

Note that these traits are usable with any classes. For example,

  - is_vectorspace<std::string>::value  ==> false
  - pTraits_nComponents<std::string>::value  ==> 1
  - pTraits<std::string>::nComponents  ==> fails to compile

  Thus also allows testing pTraits_rank<...>::value with items
  for which pTraits<...>::rank fails to compile.

  Eg, cyclicAMIPolyPatch::interpolate called by FaceCellWave with a
  wallPoint.

     pTraits<wallPoint>::rank ==> fails to compile
     is_vectorspace<wallPoint>::value ==> false

GIT: relocate ListLoopM.H to src/OpenFOAM/fields/Fields (future isolation)
2023-08-10 10:38:39 +02:00
Mark Olesen
aad4c2222e ENH: subsetMesh -exclude-patches (#2947)
STYLE: use -exclude-patches instead of -excludePatch for other utilities

- avoids inconsistencies with utilities like foamToVTK etc.
2023-08-02 12:35:10 +02:00
Mark Olesen
14f7d44ca0 ENH: patch/zone indices with select/ignore combination
STYLE: prefer indices() to patchSet() with warn=false
2023-08-02 12:34:41 +02:00
Mark Olesen
db16d80840 ENH: use objectRegistry/IOobjectList sorted instead of lookupClass
- in most cases a parallel-consistent order is required.
  Even when the order is not important, it will generally require
  fewer allocations to create a UPtrList of entries instead of a
  HashTable or even a wordList.
2023-07-31 20:11:32 +02:00
Mark Olesen
dc95242cd2 ENH: use sorted order for fieldSelection::selectionNames() (#2819)
- return a sorted wordList instead of a wordHashSet to ensure that
  fields will be processed in consistent order in parallel
2023-07-31 20:11:32 +02:00
Mark Olesen
ed314b2740 ENH: use sorted order for patch IDs in fieldFunctionObjects (#2819)
- replaces labelHashSet with a sorted labelList to ensure that patches
  will be processed in consistent order in parallel
2023-07-31 20:11:32 +02:00
Mark Olesen
5397c9ac04 COMP: use csorted() instead of sorted() 2023-07-31 20:11:32 +02:00
Mark Olesen
129b738136 ENH: define IOobjectList::csorted(), deprecate some sorted() const methods
- prefer csorted() method for const access since it ensures that the
  return values are also const pointers (for example) even if
  the object itself can be accessed as a non-const.

- the csorted() method already existed for HashTable and
  objectRegistry, but now added to IOobjectList for method name
  consistency (even although the IOobjectList only has a const-access
  version)

ENH: objectRegistry with templated strict lookup

- for lookupClass and csorted/sorted. Allows isType restriction as a
  compile-time specification.
2023-07-31 20:11:32 +02:00
Mark Olesen
0eb4354ee0 ENH: use DynamicList for handling stored objects (ReadFields)
- DynamicList can be used as a LIFO with fewer allocations than a
  linked-list would have.

- support generic name matcher for readFields()
2023-07-31 20:11:32 +02:00
Mark Olesen
f18a29a742 ENH: subsetMesh suppress wildcard selection of processor patches (#2947) 2023-07-31 14:07:17 +02:00
Mark Olesen
945e3e41b1 ENH: more consistent use of good() or direct testing instead valid() 2023-07-27 16:52:03 +02:00
Mark Olesen
8117cde596 ENH: use emplace_set, emplace_back to simplify code
- eg, for cloud fields, tmp emplace when reading fields etc.
2023-07-27 16:52:03 +02:00
Mark Olesen
63258d0b33 ENH: refine PtrList emplace method, add emplace for autoPtr/refPtr...
* resize_null() methods for PtrList variants
  - for cases where an existing PtrList needs a specific size and
    but not retain any existing entries.

    Eg,
        ptrs.resize_null(100);

    vs.   ptrs.free();     ptr.resize(100);
    or    ptr.resize(100); ptrs.free();

* remove stored pointer before emplacing PtrList elements
  - may reduce memory peaks

* STYLE: static_cast of (nullptr) instead of reinterpret_cast of (0)

* COMP: implement emplace_set() for PtrDynList
  - previously missing, which meant it would have leaked through to the
    underlying PtrList definition

* emplace methods for autoPtr, refPtr, tmp
  - applies reset() with forwarding arguments.
    For example,

        tmp<GeoField> tfld = ...;

    later...

        tfld.emplace(io, mesh);

    vs.
        tfld.reset(new GeoField(io, mesh));
    or
        tfld.reset(tmp<GeoField>::New(io, mesh));

    The emplace() obviously has reduced typing, but also allows the
    existing stored pointer to be deleted *before* creating its
    replacement (reduces memory peaks).
2023-07-27 16:52:03 +02:00
Mark Olesen
32903d337e ENH: add slice/range support to UPstream::waitSomeRequests()
- this simplifies polling receives and allows separation from
  the sends

ENH: add UPstream::removeRequests(pos, len)

- cancel/free of outstanding requests and remove segment from the
  internal list of outstanding requests
2023-07-27 16:52:03 +02:00
Mark Olesen
779c3fe11e STYLE: use 'is_sorted()' instead of 'sorted()' for readers, Pair, ...
- avoids naming ambiguity between querying sorted state vs returning a
  sorted list (for example)

ENH: add 'good()' method to a few more classes
2023-07-19 14:10:31 +02:00
Mark Olesen
8562f4d7a4 STYLE: use UPtrList::test() instead of separate bounds checking 2023-07-19 14:10:31 +02:00
Mark Olesen
65cddb6120 ENH: specialise bitOr<unsigned char> reduction
STYLE: remove extraneous parRun check before Pstream::combineReduce

- already handled by Pstream::combineReduce itself

STYLE: remove deprecated globalMeshData::ListPlusEqOp

- deprecated/superseded by ListOps::appendEqOp (2020-09)

STYLE: qualify stream format with IOstreamOption (easier to find)
2023-07-19 14:06:23 +02:00
mattijs
ab0d4d95ff ENH: snappyHexMesh: write leak-closure faces 2023-07-19 12:55:02 +01:00
mattijs
a8df552998 ENH: checkMesh: use built-in merging 2023-07-18 12:03:58 +01:00
Mark Olesen
8ee4b52560 ENH: provide MPI native bitOrOp reduce with single/multiple values
- can be used, for example, to track global states:

      // Encode as 0:empty, 1:uniform, 2:nonuniform, 3:mixed
      PackedList<2> uniformity(fields.size());

      forAll(fields, i)
      {
          uniformity.set(i, fields[i].whichUniformity());
      }

      reduce
      (
          uniformity.data(),
          uniformity.size_data(),
          bitOrOp<unsigned>()
      );
2023-07-05 15:14:26 +02:00
Mark Olesen
a1e34bb251 ENH: use mapDistribute linear construct order in a few places
- simplifies code by avoiding code duplication:
  * parLagrangianDistributor
  * meshToMesh (processorLOD and AABBTree methods)

BUG: inconsistent mapping when using processorLOD boxes (fixes #2932)

- internally the processorLODs createMap() method used a 'localFirst'
  layout whereas a 'linear' order is what is actually expected for the
  meshToMesh mapping. This will cause of incorrect behaviour
  if using processorLOD instead of AABBTree.
  A dormant bug since processorLOD is not currently selectable.
2023-07-04 20:29:07 +02:00
Mark Olesen
5635e14f81 ENH: add low-level polymorphic/boxed exprValue
- primarily for handling expression results,
  but can also be used as a universal value holder.

  Has some characteristics suitable for type-less IO:
  eg, is_integral(), nComponents()

ENH: add is_pointer() check for expression scanToken
2023-07-04 17:25:26 +02:00
Mark Olesen
d5a0eaeeee STYLE: changes to Time and TimeState
- update TimeState access methods

- use writeTime() instead of old method name outputTime()

- use deltaTValue() instead of deltaT().value()
  to avoids pointless construct of intermediate
2023-07-04 17:25:25 +02:00
Andrew Heather
763bf4674d RELEASE: Updated headers to v2306 2023-06-28 16:35:48 +01:00
mattijs
2d145e070e COMP: chtMultiRegionTwoPhaseEulerFoam: compile local files only 2023-06-28 16:35:47 +01:00
mattijs
4d7c827bd7 ENH: checkMesh: report on processor patch if non-parallel. Fixes #698 2023-06-26 12:14:30 +01:00
Mark Olesen
642d8a9dfa COMP: guards around #define OMPI_SKIP_MPICXX (avoids compiler warnings) 2023-06-23 16:05:19 +02:00
mattijs
09edb23c1d BUG: collated fails with controlDict watch files
- files might have been set during token reading so only on
  known on master processor.
  Broadcast names to all processors (even alhough they are only
  checked on master) so that the watched states remain synchronised
2023-06-21 14:56:06 +02:00
Mark Olesen
fc86e52451 ENH: extrapolateInternal() method for patch fields
- provides a more succinct way of writing

      {fa,fv}PatchField<Type>::patchInternalField(*this)

  as well as a consistent naming that can be used for patches derived
  from valuePointPatchField

ENH: readGradientEntry helper method for fixedGradient conditions

- simplifies coding and logic.
- support different read construct modes for fixedGradient
2023-06-19 17:47:03 +02:00
Mark Olesen
f9d0895707 ENH: avoid spurious library loading for decomposePar, redistributePar
- individual processor Time databases are purely for internal logistics
  and should not be introducing any new library symbols: these will
  already have been loaded in the outer loop.
2023-06-19 17:05:45 +02:00
Mark Olesen
4412566c58 ENH: support command-line specification of MPI threads (#2791)
- MPI_THREAD_MULTIPLE is usually undesirable for performance reasons,
  but in some cases may be necessary if a linked library expects it.
  Provide a '-mpi-threads' option to explicitly request it.

ENH: consolidate some looping logic within argList
2023-06-19 17:05:45 +02:00
Mark Olesen
1cdba9b269 ENH: make checkMesh writing of bad edges optional (#2771)
- primarily relevant for finite-area meshes, in which case they can be
  considered to be an additional, detailed diagnositic that is
  normally not needed (clutters the file system).

  Writing can be enabled with the `-write-edges` option.
2023-06-13 20:41:53 +02:00
Andrew Heather
b87db82c05 ENH: particleTracks - reinstated label field output 2023-06-13 14:13:58 +01:00
Mark Olesen
1c9ea038d0 MISC: additional -repeat option for testing MPI_Comm leakage (#1598) 2023-06-12 13:59:47 +02:00
mattijs
adc38d55ac ENH: coupled: enforce consistency. See #2783 2023-06-01 08:14:42 +00:00
mattijs
fcbfa40b0b ENH: checkMesh: small message change 2023-05-30 10:41:15 +01:00
Mark Olesen
8d2bf3fc2e ENH: soft update of autoPtr<fileOperation> to refPtr<fileOperation>
Co-authored-by: mattijs <mattijs>
2023-05-23 15:03:23 +02:00
Mark Olesen
8a060e87cb ENH: fileHandler support for faMeshDistributor and field distributors
- fatten the interface to continue allowing write control with a bool
  or with a dedicated file handler. This may slim down in the future.

Co-authored-by: mattijs <mattijs>
2023-05-23 15:01:09 +02:00
Mark Olesen
d34dfbe0b7 ENH: dummy fileOperation: placeholder for interfaces taking a reference
STYLE: align readOnProc/writeOnProc naming within masterUncollated
2023-05-23 11:12:37 +02:00
Mark Olesen
a34262966b STYLE: use fileOperation nProcs() instead of setNProcs() 2023-05-22 18:04:21 +02:00
Mark Olesen
821d395259 ENH: use refPtr fileHandler in decomposeFaFields, faMeshReconstructor 2023-05-22 17:59:33 +02:00
Mark Olesen
06147dabe7 ENH: more flexible handling of FOAM_IORANKS
- accept plain lists (space or comma separated) as well as the
  traditional OpenFOAM lists. This simplifies argument handling
  with job scripts.

  For example,
     simpleFoam -ioRanks 0,4,8 ...
  vs
     simpleFoam -ioRanks '(0 4 8)'  ...

  It is also possible to select the IO ranks on a per-host basis:

     simpleFoam -ioRanks host  ...

- expose rank/subrank handling as static fileOperation methods
2023-05-22 17:59:30 +02:00
Mark Olesen
11742301f1 ENH: add support for file/directory broadcasting
Co-authored-by: mattijs <mattijs>
2023-05-22 17:48:09 +02:00
Mark Olesen
9cd14bc8b0 STYLE: remove unused isWriteProc() methods from distribute fields 2023-05-22 17:46:16 +02:00
Mark Olesen
5eebc75845 ENH: improved UPstream gather/scatter functionality
- added UPstream::allGatherValues() with a direct call to MPI_Allgather.
  This enables possible benefit from a variety of internal algorithms
  and simplifies the caller

    Old:
        labelList nPerProc
        (
            UPstream::listGatherValues<label>(patch_.size(), myComm)
        );
        Pstream::broadcast(nPerProc, myComm);

    New:

        const labelList nPerProc
        (
            UPstream::allGatherValues<label>(patch_.size(), myComm)
        );

- Pstream::allGatherList uses MPI_Allgather for contiguous values
  instead of the hand-rolled tree walking involved with
  gatherList/scatterList.

-
- simplified the calling parameters for mpiGather/mpiScatter.

  Since send/recv data types are identical, the send/recv count
  is also always identical. Eliminates the possibility of any
  discrepancies.

  Since this is a low-level call, it does not affect much code.
  Currently just Foam::profilingPstream and a UPstream internal.

BUG: call to MPI_Allgather had hard-coded MPI_BYTE (not the data type)

- a latent bug since it is currently only passed char data anyhow
2023-05-22 17:18:35 +02:00
Mark Olesen
302eb7b560 REGRESSION: createBaffles : incorrect dictionary lookup
- was introduced with f7a7f1c14c, only affected very recent develop
2023-05-20 18:59:20 +02:00
Mark Olesen
bc51caac32 ENH: remove sign from SHA1Digest cdata_bytes(), data_bytes()
- this refinement of commit 81807646ca makes these methods
  consistent with other objects/containers.

  The 'unsigned char' access is still available via cdata()
2023-05-19 15:54:23 +02:00
Mark Olesen
f41d1879b9 STYLE: prefer isHeaderClass<Type>() check instead of Type::typeName
- use typeHeaderOk<regIOobject>(false) for some generic file existence
  checks. Often had something like labelIOField as a placeholder, but
  that may be construed to have a particular something.
2023-05-19 00:48:14 +02:00
Mark Olesen
87cb811db2 COMP: fix library linkage (#2784), silence some unused variable warnings 2023-05-19 00:46:52 +02:00
Mark Olesen
a5d9ad3a5c STYLE: use noexcept creation of InfoProxy and dereference as '*iproxy'
- this removes the 'magic' use of the exposed t_ member in favour
  of a generic dereference
2023-05-18 18:23:46 +02:00
Mark Olesen
f7a7f1c14c ENH: reduced warnings about createBaffles on processor patches (#2781)
- coupled patches are treated distinctly and independently of
  internalFacesOnly, it makes little sense to report them with a
  warning about turning off boundary faces (which would not work
  anyhow).

STYLE: update code style for createBaffles
2023-05-17 11:46:57 +02:00
Mark Olesen
a581a8cb8d ENH: disallow implicit cast of autoPtr to non-const pointer
- permitting a cast to a non-const pointer adds uncertainty of
  ownership.

- adjust PtrDynList transfer. Remove the unused 'PtrDynList::remove()'
  method, which is better handled with pop().
2023-05-17 11:46:57 +02:00
Kutalmis Bercin
59b1cf080e ENH: Tensor/SymmTensor: add devSymm and devTwoSymm funcs to avoid intermediates 2023-05-15 17:05:10 +01:00
Mark Olesen
783934ccad ENH: add global topology check in checkMesh and makeFaMesh (#2771)
- detect when boundary patches are multiply connected across edges

STYLE: initialize some faMesh values
2023-05-09 19:30:58 +02:00
Mark Olesen
31600c96d4 ENH: output finiteArea patchID with foamToVTK -with-ids
- can be quite useful for debugging/orientation with complex
  geometries
2023-05-09 19:30:58 +02:00
Mark Olesen
f462a850ce ENH: added polyBoundaryMesh patchID(meshFacei) method
- this complements the whichPatch(meshFacei) method [binary search]
  and the list of patchID() by adding internal range checks.

  eg,
     Before
     ~~~~~~
     if (facei >= mesh.nInternalFaces() && facei < mesh.nFaces())
     {
         patchi = pbm.patchID()[facei - mesh.nInternalFaces()];
         ...
     }

     After
     ~~~~~
     patchi = pbm.patchID(facei);

     if (patchi >= 0)
     {
         ...
     }
2023-05-09 19:30:58 +02:00
Mark Olesen
8e32db2b5f STYLE: more explicit use of REGISTER when storing fields
ENH: add phaseScopedName convenience method

- unites IOobject::scopedName + phasePropertyName
2023-05-09 19:30:57 +02:00
Mark Olesen
16591012e9 ENH: add -verbose option to surface conversion, cleanup
- by default, reduce the amount of output

ENH: support default text description for -verbose option

- simplifies use in more places.
2023-05-09 19:30:57 +02:00
Mark Olesen
2eb1f5678d ENH: use Improbe/Mrecv for NBX size exchange
- retains the queried message without secondary polling.
  Purported to be slightly faster. Better thread-safety.
2023-05-09 14:51:43 +02:00
Mark Olesen
639b800049 ENH: clearer separation of MPI initialize/finalize stages (#2774)
ENH: support transfer from a wrapped MPI request to global list

- allows coding with a list UPstream::Request and subsequently either
  retain that list or transfer into the global list.
2023-05-09 14:51:43 +02:00
Mark Olesen
e967305ef2 STYLE: use calculatedType() and zeroGradientType() methods 2023-05-02 13:34:12 +02:00
Mark Olesen
ee39e3d276 STYLE: use explicit REGISTER option when storing fields 2023-04-25 13:45:08 +02:00
Mark Olesen
ce282dfbbf ENH: correct the selfComm procNo relative to world communicator
STYLE: qualify worldComm as UPstream instead Pstream

STYLE: PPCG::gSumMagProd() as static function
2023-04-24 15:46:04 +02:00
Mark Olesen
5042d1296f ENH: consistent UniformDimensionedField naming
- construct from components, or use word::null to ensure
  consistent avoid naming between IOobject vs dimensioned type.

- support construct with parameter ordering as per DimensionedField

ENH: instantiate a uniformDimensionedLabelField

- eg, for registering standalone integer counters
2023-04-24 15:46:04 +02:00
Mark Olesen
2b1061420c STYLE: remove trailing space, tabs 2023-04-24 15:37:33 +02:00
Mark Olesen
7bef18a274 STYLE: document const-ness of isA, refCast 2023-04-21 15:49:27 +02:00
Mark Olesen
80bc1db5b7 ENH: provide UPstream intra-host and inter-host communicators
- simplifies communication structuring with intra-host communication.
  Can be used for IO only, or for specialised communication.

  Demand-driven construction. Gathers the SHA1 of host names when
  determining the connectivity. Internally uses an MPI_Gather of the
  digests and a MPI_Bcast of the unique host indices.

  NOTE:
    does not use MPI_Comm_splt or MPI_Comm_splt_type since these
    return MPI_COMM_NULL on non-participating process which does not
    easily fit into the OpenFOAM framework.

    Additionally, if using the caching version of
    UPstream::commInterHost() and UPstream::commIntraHost()
    the topology is determined simultaneously
    (ie, equivalent or potentially lower communication).
2023-04-18 14:08:39 +02:00
Mark Olesen
9d3427e0b4 ENH: consolidate UPstream::commsStruct code
- make sizing of commsStruct List demand-driven as well
  for more robustness, fewer unneeded allocations.

- fix potential latent bug with allBelow/allNotBelow for proc 0
  (linear communication).

ENH: remove unused/unusable UPstream::communicator optional parameter

- had constructor option to avoid constructing the MPI backend,
  but this is not useful and inconsistent with what the reset or
  destructor expect.

STYLE: local use of UPstream::communicator

- automatically frees communicator when it leaves scope
2023-04-18 14:08:39 +02:00
Mark Olesen
b277b913cf ENH: add guards for partially populated communicators
- these are primarily when encountering sparse (eg, inter-host)
  communicators. Additional UPstream convenience methods:

  is_rank(comm)
    => True if process corresponds to a rank in the communicators.
       Can be a master rank or a sub-rank.

  is_parallel(comm)
    => True if parallel algorithm or exchange is used on the process.
       same as

           (parRun() && (nProcs(comm) > 1) && is_rank(comm))
2023-04-18 14:08:39 +02:00
Mark Olesen
a96dcf706b ENH: robuster handling of inv() of fields with singular tensors (#2724)
- replace the "one-size-fits-all" approach of tensor field inv()
  with individual 'failsafe' inverts.

  The inv() field function historically just checked the first entry
  to detect 2D cases and adjusted/readjusted *all* tensors accordingly
  (to avoid singularity tensors and/or noisy inversions).

  This seems to have worked reasonably well with 3D volume meshes, but
  breaks down for 2D area meshes, which can be axis-aligned
  differently on different sections of the mesh.
2023-04-18 13:59:09 +02:00
Mark Olesen
09dd913077 ENH: use primitive fields when calculating triSurface fields (#2758) 2023-04-13 20:54:50 +02:00
Mark Olesen
d826f9259f ENH: properly trap any sub-rank changes in allocatePstreamCommunicator
- not currently used, but it is possible that communicator allocation
  modifies the list of sub-ranks. Ensure that the correct size is used
  when (re)initialising the linear/tree structures.

STYLE: adjust MPI test applications

- remove some clutter and unneeded grouping.
  Some ideas for host-only communicators
2023-04-08 18:33:52 +02:00
Mark Olesen
475ed5cc32 STYLE: readOnProc/writeOnProc instead of 'valid' for IO 2023-04-04 15:04:26 +02:00
Mark Olesen
87eed5e3b8 ENH: place more patch field attributes under template invariant Base
- attributes such as assignable(), coupled() etc

- common patchField types: calculatedType(), zeroGradientType() etc.
  This simplifies reference to these types without actually needing a
  typed patchField version.

ENH: add some basic patchField types to fieldTypes namespace

- allows more general use of the names

ENH: set extrapolated/calculated from patchInternalField directly

- avoids intermediate tmp
2023-04-03 13:33:56 +02:00
Mark Olesen
4994456a28 ENH: add 2D det() / inv() methods for Tensor/SymmTensor (#2724)
- for cases where a 3D tensor is being used to represent 2D content,
  the determinant is zero. Can use inv2D(excludeDirection) to compensate
  and invert as if it were only 2D.

ENH: consistent definitions for magSqr of symmTensors, diagSqr() norm

COMP: return scalar not component type for magSqr

- had inconsistent definitions with SymmTensor returning the component
  type and Tensor returning scalar. Only evident with complex.
2023-03-23 10:31:54 +01:00
Mark Olesen
25bc7d65f7 STYLE: prefer REGISTER/NO_REGISTER instead of true/false for IOobject
- self-documenting
2023-03-10 14:16:32 +00:00
Mark Olesen
20566a87f5 ENH: provide getter/setter interface to standard communicators
- similar to UPstream::parRun(), the setter returns the previous value.

  The accessors are prefixed with 'comm':
  Eg, commGlobal(), commWarn(), commWorld(), commSelf().
  This distinguishes them from any existing variables (eg, worldComm)
  and arguably more similar to MPI_COMM_WORLD etc...

  If demand-driven communicators are added in the future, the function
  call syntax can help encapsulate that.

  Previously:

      const label oldWarnComm = UPstream::warnComm;
      const label oldWorldComm = UPstream::worldComm;
      UPstream::warnComm = myComm;
      UPstream::worldComm = myComm;
      ...

      UPstream::warnComm = oldWarnComm;
      UPstream::worldComm = oldWorldComm;

  Now:
      const label oldWarnComm = UPstream::commWarn(myComm);
      const label oldWorldComm = UPstream::commWorld(myComm);
      ...

      UPstream::commWarn(oldWarnComm);
      UPstream::commWorld(oldWorldComm);

STYLE: check (warnComm >= 0) instead of (warnComm != -1)
2023-03-09 16:01:04 +00:00
Mark Olesen
b17422ef1a ENH: use readValueEntry, readMixedEntries for simpler program control 2023-03-08 15:30:04 +00:00
Mark Olesen
820f93c3b4 ENH: simplify box mesh construction (PDRblockMesh)
ENH: construct or reset boundBox from zero_one for a 0-1 unit cube

ENH: add some testing timings (for !596 and #2715)
2023-03-03 16:23:42 +01:00
Mark Olesen
d5c0852de1 ENH: improve diagnostic fields for checkFaMesh -write-vtk
ENH: support VTK output of procIDs for point data for some writers

TUT: areaWrite for drippingChair
2023-03-02 20:50:52 +01:00
Mark Olesen
f75af788c1 ENH: add factory method readContents to IO containers
- useful when regular contents are to be read via an IOobject and
  returned.

  Eg,  dictionary propsDict(IOdictionary::readContents(dictIO));
  vs.  dictionary propsDict(static_cast<dictionary&&>(IOdictionary(dictIO)));

  Commonly these would have simply been constructed directly as the
  IO container:

  eg,  IOdictionary propsDict(dictIO);

  However, that style may not ensure proper move semantics for return
  types.

  Now,
  =====
      labelList decomp(labelIOList::readContents(io));
      ... something
      return decomp;
  =====

  Previously,
  =====
      labelIOList decomp(io);

      // Hope for the best...
      return decomp;

      // Or be explicit and ensure elision occurs...
      return labelList(std::move(static_cast<labelList&>(decomp)));
  =====

  Note:
       labelList list(labelIOList(io));

       looks like a good idea, but generally fails to compile
2023-02-28 15:43:26 +01:00
Mark Olesen
9729617ae3 ENH: PtrList iterate over non-null entries (#2702)
- the iterator/const_iterator now skip any nullptr entries,
  which enables the following code to work even if the PtrList
  contains nullptr:

  for (const auto& intf : interfaces)
  {
      // Do something
      ...
  }

- this is a change in behaviour compared to OpenFOAM-v2212 and earlier,
  but is non-breaking:
  * Lists without null entries will traverse exactly as before.
  * Lists with null entries will now traverse correctly without
    provoking a FatalError.
2023-02-27 20:03:02 +01:00
Mark Olesen
afee861af9 DEFEATURE: remove PtrList random access iterators (#2702)
- random access was unused.
  Retaining it would impede reimplementing iterators to only iterate
  across non-null items.
2023-02-27 20:03:02 +01:00
Mark Olesen
0ab0ecb541 ENH: change refCount (internal) from count() to use_count()
- allows unambiguous of count() for other classes.
  Naming as per std::shared_ptr.

STYLE: qualify use_count() and unique() methods with the refCount base

- clearer/consistent meaning
2023-02-27 20:03:02 +01:00
Mark Olesen
117173aaba ENH: use min/max instead of first/last for int/slice ranges
- consistent with MinMax tuple etc.
- cull unused before(), after() methods
2023-02-27 15:41:25 +01:00
Mark Olesen
b33b26ad34 STYLE: replace zero::null usage with zero
- the null output adapter was previously used for the HashTables API
  when HashSet actually stored key/value. Now that the node only
  contains the key, having suppressed output is redundant, as is the
  zero::null class (reduces clutter)

STYLE: replace one::minus dispatch in extendedEdgeMesh

GIT: remove Foam::nil typedef (deprecated since May-2017)
2023-02-27 15:41:25 +01:00
Mark Olesen
cdcbd05587 COMP: resolve clamp() float/double ambiguity (SPDP compilation)
- pass by value instead of reference, add functional casts in some
  places. Can still rely on integer promotions though.

  OK:   clamp(value, 2, 20)   ==> (float, int, int)
  OK:   clamp(value, scalar(2), scalar(20))  ==> (float, float, float)
  NOK:  clamp(value, 2.0, 20) ==> (float, double, int)
2023-02-27 15:41:25 +01:00
Mark Olesen
28b492bd54 ENH: unroll loops for complexVector functions
STYLE: prefer STL naming real(), imag() instead of Re(), Im()
2023-02-27 15:41:25 +01:00
Mark Olesen
f0a196a908 STYLE: include primitivePatch.H (instead of PrimitivePatch.H)
- further de-clutter in the future

ENH: PrimitivePatchInterpolation with unique_ptr for memory management
2023-02-27 15:41:25 +01:00
Mark Olesen
e623e6a865 STYLE: favour include word.H instead of string.H
- in many places the string.H include is redundant anyhow.
  May wish to change to foamString.H (or equiv) in the future
2023-02-27 15:41:25 +01:00